Ggra9966.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9966.t1
Unique NameGgra9966.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length359
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000882_piloncontigtig00000882_pilon:88740..89816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9966Ggra9966Gracilaria gracilis GNS1m malegenetig00000882_pilon 88740..89816 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9966.t1.stop1Ggra9966.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000882_pilon 88740..88742 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9966.t1.CDS1Ggra9966.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000882_pilon 88740..89816 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9966.t1.exon1Ggra9966.t1.exon1Gracilaria gracilis GNS1m maleexontig00000882_pilon 88740..89816 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9966.t1.start1Ggra9966.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000882_pilon 89814..89816 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9966.t1Ggra9966.t1Gracilaria gracilis GNS1m malepolypeptidetig00000882_pilon 88740..89816 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9966.t1 ID=Ggra9966.t1|Name=Ggra9966.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=359bp
MLSLPFALIDALLLTIPCPAHPQSDLSNDPKYQKSPEDVPSSAITAFLAG
LVTPAFCQFLLDWLAMFSSPLNINTFWPYAQIIIRILAYYTSLSVGLLLT
MYGMAKPSFDIGGAGVGVSISLYASDFSGCASYRLVQIWNCRRFSHIPRE
HRCLLPYALTQLTRLSIRSELWNTMPFKQFRDLVDFAVQLGNATLLDTLL
KTDSSLTTSAKLSQLHQRIPYFQRLLSARKRFVSHAFEALVCIANETNPP
GSFSFAKRVNLVTYCLHLGDGQLITRVLDTDTGRSPACATRLSEVQIRLP
DLNCLSEARQQNLVKLLKELIQRASDETMTSIPPFRDVVNLYLNSVHTLN
SFPMTLRP*
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spliced messenger RNA

>Ggra9966.t1 ID=Ggra9966.t1|Name=Ggra9966.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1077bp|location=Sequence derived from alignment at tig00000882_pilon:88740..89816- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTCAGTCTTCCTTTCGCTCTCATCGATGCACTGCTCCTGACAATTCC
TTGTCCTGCCCATCCCCAGTCCGACTTATCGAATGATCCGAAATACCAAA
AAAGTCCTGAGGACGTCCCGTCGTCAGCAATCACAGCCTTTCTCGCCGGC
CTCGTCACCCCGGCTTTCTGTCAATTTCTCCTCGATTGGCTTGCCATGTT
TTCCAGTCCTCTCAACATCAATACCTTTTGGCCGTACGCGCAAATCATCA
TCCGAATCTTAGCCTATTACACTTCACTTTCAGTCGGTTTGTTGCTCACC
ATGTATGGCATGGCCAAGCCGTCATTCGATATTGGTGGTGCTGGTGTCGG
TGTTTCGATTTCCTTGTATGCCTCCGACTTCTCTGGTTGCGCTTCGTACA
GGCTTGTACAGATATGGAACTGTCGACGCTTCAGTCATATCCCACGCGAA
CACCGCTGTTTGCTACCGTACGCTCTCACACAGCTCACGCGCCTGTCCAT
TCGCTCCGAACTCTGGAACACCATGCCGTTCAAACAATTCCGTGATCTAG
TAGACTTCGCTGTGCAGCTAGGCAATGCCACGCTATTAGACACCCTGTTA
AAAACAGACTCCTCGCTCACCACATCTGCCAAACTCAGTCAGCTTCACCA
ACGTATCCCATATTTTCAGCGTCTCCTCAGTGCACGAAAACGGTTTGTAA
GCCATGCATTCGAAGCGCTAGTGTGCATCGCGAACGAAACCAATCCGCCG
GGCTCGTTTTCCTTTGCAAAGCGCGTAAATCTTGTGACGTACTGCTTGCA
TCTCGGTGATGGGCAGCTAATAACACGTGTTCTGGATACGGACACTGGTC
GGTCACCAGCATGTGCCACCAGGCTCTCGGAAGTTCAAATTCGTCTTCCA
GATCTCAATTGCCTCTCAGAAGCCCGCCAACAGAATCTAGTGAAATTGCT
AAAGGAGTTAATTCAGAGAGCATCGGATGAAACCATGACAAGTATACCTC
CATTTCGTGATGTGGTCAACCTGTACTTGAATTCAGTTCACACCCTAAAC
TCATTTCCGATGACGTTACGACCCTGA
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protein sequence of Ggra9966.t1

>Ggra9966.t1 ID=Ggra9966.t1|Name=Ggra9966.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=359bp
MLSLPFALIDALLLTIPCPAHPQSDLSNDPKYQKSPEDVPSSAITAFLAG
LVTPAFCQFLLDWLAMFSSPLNINTFWPYAQIIIRILAYYTSLSVGLLLT
MYGMAKPSFDIGGAGVGVSISLYASDFSGCASYRLVQIWNCRRFSHIPRE
HRCLLPYALTQLTRLSIRSELWNTMPFKQFRDLVDFAVQLGNATLLDTLL
KTDSSLTTSAKLSQLHQRIPYFQRLLSARKRFVSHAFEALVCIANETNPP
GSFSFAKRVNLVTYCLHLGDGQLITRVLDTDTGRSPACATRLSEVQIRLP
DLNCLSEARQQNLVKLLKELIQRASDETMTSIPPFRDVVNLYLNSVHTLN
SFPMTLRP*
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mRNA from alignment at tig00000882_pilon:88740..89816-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9966.t1 ID=Ggra9966.t1|Name=Ggra9966.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1077bp|location=Sequence derived from alignment at tig00000882_pilon:88740..89816- (Gracilaria gracilis GNS1m male)
ATGCTCAGTCTTCCTTTCGCTCTCATCGATGCACTGCTCCTGACAATTCC
TTGTCCTGCCCATCCCCAGTCCGACTTATCGAATGATCCGAAATACCAAA
AAAGTCCTGAGGACGTCCCGTCGTCAGCAATCACAGCCTTTCTCGCCGGC
CTCGTCACCCCGGCTTTCTGTCAATTTCTCCTCGATTGGCTTGCCATGTT
TTCCAGTCCTCTCAACATCAATACCTTTTGGCCGTACGCGCAAATCATCA
TCCGAATCTTAGCCTATTACACTTCACTTTCAGTCGGTTTGTTGCTCACC
ATGTATGGCATGGCCAAGCCGTCATTCGATATTGGTGGTGCTGGTGTCGG
TGTTTCGATTTCCTTGTATGCCTCCGACTTCTCTGGTTGCGCTTCGTACA
GGCTTGTACAGATATGGAACTGTCGACGCTTCAGTCATATCCCACGCGAA
CACCGCTGTTTGCTACCGTACGCTCTCACACAGCTCACGCGCCTGTCCAT
TCGCTCCGAACTCTGGAACACCATGCCGTTCAAACAATTCCGTGATCTAG
TAGACTTCGCTGTGCAGCTAGGCAATGCCACGCTATTAGACACCCTGTTA
AAAACAGACTCCTCGCTCACCACATCTGCCAAACTCAGTCAGCTTCACCA
ACGTATCCCATATTTTCAGCGTCTCCTCAGTGCACGAAAACGGTTTGTAA
GCCATGCATTCGAAGCGCTAGTGTGCATCGCGAACGAAACCAATCCGCCG
GGCTCGTTTTCCTTTGCAAAGCGCGTAAATCTTGTGACGTACTGCTTGCA
TCTCGGTGATGGGCAGCTAATAACACGTGTTCTGGATACGGACACTGGTC
GGTCACCAGCATGTGCCACCAGGCTCTCGGAAGTTCAAATTCGTCTTCCA
GATCTCAATTGCCTCTCAGAAGCCCGCCAACAGAATCTAGTGAAATTGCT
AAAGGAGTTAATTCAGAGAGCATCGGATGAAACCATGACAAGTATACCTC
CATTTCGTGATGTGGTCAACCTGTACTTGAATTCAGTTCACACCCTAAAC
TCATTTCCGATGACGTTACGACCCTGA
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Coding sequence (CDS) from alignment at tig00000882_pilon:88740..89816-

>Ggra9966.t1 ID=Ggra9966.t1|Name=Ggra9966.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1077bp|location=Sequence derived from alignment at tig00000882_pilon:88740..89816- (Gracilaria gracilis GNS1m male)
ATGCTCAGTCTTCCTTTCGCTCTCATCGATGCACTGCTCCTGACAATTCC
TTGTCCTGCCCATCCCCAGTCCGACTTATCGAATGATCCGAAATACCAAA
AAAGTCCTGAGGACGTCCCGTCGTCAGCAATCACAGCCTTTCTCGCCGGC
CTCGTCACCCCGGCTTTCTGTCAATTTCTCCTCGATTGGCTTGCCATGTT
TTCCAGTCCTCTCAACATCAATACCTTTTGGCCGTACGCGCAAATCATCA
TCCGAATCTTAGCCTATTACACTTCACTTTCAGTCGGTTTGTTGCTCACC
ATGTATGGCATGGCCAAGCCGTCATTCGATATTGGTGGTGCTGGTGTCGG
TGTTTCGATTTCCTTGTATGCCTCCGACTTCTCTGGTTGCGCTTCGTACA
GGCTTGTACAGATATGGAACTGTCGACGCTTCAGTCATATCCCACGCGAA
CACCGCTGTTTGCTACCGTACGCTCTCACACAGCTCACGCGCCTGTCCAT
TCGCTCCGAACTCTGGAACACCATGCCGTTCAAACAATTCCGTGATCTAG
TAGACTTCGCTGTGCAGCTAGGCAATGCCACGCTATTAGACACCCTGTTA
AAAACAGACTCCTCGCTCACCACATCTGCCAAACTCAGTCAGCTTCACCA
ACGTATCCCATATTTTCAGCGTCTCCTCAGTGCACGAAAACGGTTTGTAA
GCCATGCATTCGAAGCGCTAGTGTGCATCGCGAACGAAACCAATCCGCCG
GGCTCGTTTTCCTTTGCAAAGCGCGTAAATCTTGTGACGTACTGCTTGCA
TCTCGGTGATGGGCAGCTAATAACACGTGTTCTGGATACGGACACTGGTC
GGTCACCAGCATGTGCCACCAGGCTCTCGGAAGTTCAAATTCGTCTTCCA
GATCTCAATTGCCTCTCAGAAGCCCGCCAACAGAATCTAGTGAAATTGCT
AAAGGAGTTAATTCAGAGAGCATCGGATGAAACCATGACAAGTATACCTC
CATTTCGTGATGTGGTCAACCTGTACTTGAATTCAGTTCACACCCTAAAC
TCATTTCCGATGACGTTACGACCCTGA
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