Ggra995.t2 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra995.t2
Unique NameGgra995.t2
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length314
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:98456..99397 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra995Ggra995Gracilaria gracilis GNS1m malegenetig00000027_pilon 98456..100380 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra995.t2.stop1Ggra995.t2.stop1Gracilaria gracilis GNS1m malestop_codontig00000027_pilon 98456..98458 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra995.t2.CDS1Ggra995.t2.CDS1Gracilaria gracilis GNS1m maleCDStig00000027_pilon 98456..99397 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra995.t2.exon1Ggra995.t2.exon1Gracilaria gracilis GNS1m maleexontig00000027_pilon 98456..99397 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra995.t2.start1Ggra995.t2.start1Gracilaria gracilis GNS1m malestart_codontig00000027_pilon 99395..99397 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra995.t2Ggra995.t2Gracilaria gracilis GNS1m malepolypeptidetig00000027_pilon 98456..99397 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra995.t2 ID=Ggra995.t2|Name=Ggra995.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=314bp
MYQHFTARRRSEHAAAGDGDDGDHEDDDALARVEAAMTRGADERGAAAEL
GARIIAACSRLRGGVQQGVARNAARRVAHAHSAAEVRAAVREWGGLDVLL
LARLFAAVHALQQQRRDAARAARVQRGVQRRRRRRRQRALMQATPPPLLP
PRAALRELPLTAGVVDLQREQSLLQRGAAEQPQHEGDDEREGGGGEALQQ
LRSECALDVRAVAQRMRAAWQQQQQQQQQQPLRRDGARPPLLGARAAEAL
ALGAHARAASVLAELSALRALLRAPRLDARVLAAAGAAAGWRAARRRRRH
GAGWWRRSWRPRR*
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spliced messenger RNA

>Ggra995.t2 ID=Ggra995.t2|Name=Ggra995.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=942bp|location=Sequence derived from alignment at tig00000027_pilon:98456..99397- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTACCAGCACTTTACGGCGCGCCGCCGCAGCGAGCACGCCGCCGCCGG
CGACGGCGACGACGGCGACCACGAGGACGACGACGCGCTGGCGCGCGTCG
AGGCGGCCATGACGCGCGGTGCGGACGAGCGCGGCGCGGCGGCCGAGCTG
GGCGCGCGCATCATCGCGGCGTGCAGCCGGCTGCGCGGCGGCGTGCAGCA
GGGCGTGGCGCGCAACGCGGCGCGGCGCGTGGCGCACGCGCACAGCGCGG
CGGAGGTGCGCGCCGCCGTGCGCGAGTGGGGCGGGCTGGACGTGCTGCTG
CTGGCGCGGCTGTTCGCCGCCGTGCACGCGCTGCAGCAGCAGCGGCGCGA
CGCGGCGCGCGCGGCGCGCGTGCAGCGCGGCGTGCAGCGCCGCCGCCGCC
GCCGCCGACAGCGGGCGCTGATGCAAGCCACGCCGCCGCCGCTGCTGCCG
CCGCGCGCCGCGCTGCGCGAGCTGCCGCTCACGGCGGGCGTGGTGGACCT
GCAGCGCGAGCAGTCGCTGCTGCAGCGCGGCGCGGCCGAGCAGCCCCAGC
ACGAAGGCGACGACGAGCGCGAGGGCGGCGGCGGCGAGGCGTTGCAGCAG
CTGCGGAGCGAGTGCGCGCTGGACGTGCGCGCAGTGGCGCAGCGCATGCG
CGCCGCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCTGCGAC
GCGACGGCGCGCGGCCGCCGCTGCTGGGCGCGCGCGCGGCGGAAGCGCTG
GCGCTGGGCGCGCACGCGCGCGCCGCCTCCGTGCTGGCGGAGCTGAGCGC
GCTACGCGCGCTGCTACGCGCGCCGCGGCTGGACGCGCGCGTGCTGGCCG
CGGCCGGCGCCGCCGCCGGCTGGCGCGCGGCGCGCCGCCGTCGCCGCCAC
GGCGCCGGCTGGTGGCGCCGCAGCTGGCGCCCGCGCCGCTGA
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protein sequence of Ggra995.t2

>Ggra995.t2 ID=Ggra995.t2|Name=Ggra995.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=314bp
MYQHFTARRRSEHAAAGDGDDGDHEDDDALARVEAAMTRGADERGAAAEL
GARIIAACSRLRGGVQQGVARNAARRVAHAHSAAEVRAAVREWGGLDVLL
LARLFAAVHALQQQRRDAARAARVQRGVQRRRRRRRQRALMQATPPPLLP
PRAALRELPLTAGVVDLQREQSLLQRGAAEQPQHEGDDEREGGGGEALQQ
LRSECALDVRAVAQRMRAAWQQQQQQQQQQPLRRDGARPPLLGARAAEAL
ALGAHARAASVLAELSALRALLRAPRLDARVLAAAGAAAGWRAARRRRRH
GAGWWRRSWRPRR*
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mRNA from alignment at tig00000027_pilon:98456..99397-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra995.t2 ID=Ggra995.t2|Name=Ggra995.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=942bp|location=Sequence derived from alignment at tig00000027_pilon:98456..99397- (Gracilaria gracilis GNS1m male)
ATGTACCAGCACTTTACGGCGCGCCGCCGCAGCGAGCACGCCGCCGCCGG
CGACGGCGACGACGGCGACCACGAGGACGACGACGCGCTGGCGCGCGTCG
AGGCGGCCATGACGCGCGGTGCGGACGAGCGCGGCGCGGCGGCCGAGCTG
GGCGCGCGCATCATCGCGGCGTGCAGCCGGCTGCGCGGCGGCGTGCAGCA
GGGCGTGGCGCGCAACGCGGCGCGGCGCGTGGCGCACGCGCACAGCGCGG
CGGAGGTGCGCGCCGCCGTGCGCGAGTGGGGCGGGCTGGACGTGCTGCTG
CTGGCGCGGCTGTTCGCCGCCGTGCACGCGCTGCAGCAGCAGCGGCGCGA
CGCGGCGCGCGCGGCGCGCGTGCAGCGCGGCGTGCAGCGCCGCCGCCGCC
GCCGCCGACAGCGGGCGCTGATGCAAGCCACGCCGCCGCCGCTGCTGCCG
CCGCGCGCCGCGCTGCGCGAGCTGCCGCTCACGGCGGGCGTGGTGGACCT
GCAGCGCGAGCAGTCGCTGCTGCAGCGCGGCGCGGCCGAGCAGCCCCAGC
ACGAAGGCGACGACGAGCGCGAGGGCGGCGGCGGCGAGGCGTTGCAGCAG
CTGCGGAGCGAGTGCGCGCTGGACGTGCGCGCAGTGGCGCAGCGCATGCG
CGCCGCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCTGCGAC
GCGACGGCGCGCGGCCGCCGCTGCTGGGCGCGCGCGCGGCGGAAGCGCTG
GCGCTGGGCGCGCACGCGCGCGCCGCCTCCGTGCTGGCGGAGCTGAGCGC
GCTACGCGCGCTGCTACGCGCGCCGCGGCTGGACGCGCGCGTGCTGGCCG
CGGCCGGCGCCGCCGCCGGCTGGCGCGCGGCGCGCCGCCGTCGCCGCCAC
GGCGCCGGCTGGTGGCGCCGCAGCTGGCGCCCGCGCCGCTGA
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Coding sequence (CDS) from alignment at tig00000027_pilon:98456..99397-

>Ggra995.t2 ID=Ggra995.t2|Name=Ggra995.t2|organism=Gracilaria gracilis GNS1m male|type=CDS|length=942bp|location=Sequence derived from alignment at tig00000027_pilon:98456..99397- (Gracilaria gracilis GNS1m male)
ATGTACCAGCACTTTACGGCGCGCCGCCGCAGCGAGCACGCCGCCGCCGG
CGACGGCGACGACGGCGACCACGAGGACGACGACGCGCTGGCGCGCGTCG
AGGCGGCCATGACGCGCGGTGCGGACGAGCGCGGCGCGGCGGCCGAGCTG
GGCGCGCGCATCATCGCGGCGTGCAGCCGGCTGCGCGGCGGCGTGCAGCA
GGGCGTGGCGCGCAACGCGGCGCGGCGCGTGGCGCACGCGCACAGCGCGG
CGGAGGTGCGCGCCGCCGTGCGCGAGTGGGGCGGGCTGGACGTGCTGCTG
CTGGCGCGGCTGTTCGCCGCCGTGCACGCGCTGCAGCAGCAGCGGCGCGA
CGCGGCGCGCGCGGCGCGCGTGCAGCGCGGCGTGCAGCGCCGCCGCCGCC
GCCGCCGACAGCGGGCGCTGATGCAAGCCACGCCGCCGCCGCTGCTGCCG
CCGCGCGCCGCGCTGCGCGAGCTGCCGCTCACGGCGGGCGTGGTGGACCT
GCAGCGCGAGCAGTCGCTGCTGCAGCGCGGCGCGGCCGAGCAGCCCCAGC
ACGAAGGCGACGACGAGCGCGAGGGCGGCGGCGGCGAGGCGTTGCAGCAG
CTGCGGAGCGAGTGCGCGCTGGACGTGCGCGCAGTGGCGCAGCGCATGCG
CGCCGCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCTGCGAC
GCGACGGCGCGCGGCCGCCGCTGCTGGGCGCGCGCGCGGCGGAAGCGCTG
GCGCTGGGCGCGCACGCGCGCGCCGCCTCCGTGCTGGCGGAGCTGAGCGC
GCTACGCGCGCTGCTACGCGCGCCGCGGCTGGACGCGCGCGTGCTGGCCG
CGGCCGGCGCCGCCGCCGGCTGGCGCGCGGCGCGCCGCCGTCGCCGCCAC
GGCGCCGGCTGGTGGCGCCGCAGCTGGCGCCCGCGCCGCTGA
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