Ggra9863.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9863.t1
Unique NameGgra9863.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length218
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000170_piloncontigtig00000170_pilon:156504..157157 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9863Ggra9863Gracilaria gracilis GNS1m malegenetig00000170_pilon 156504..157157 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9863.t1.stop1Ggra9863.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000170_pilon 156504..156506 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9863.t1.CDS1Ggra9863.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000170_pilon 156504..157157 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9863.t1.exon1Ggra9863.t1.exon1Gracilaria gracilis GNS1m maleexontig00000170_pilon 156504..157157 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9863.t1.start1Ggra9863.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000170_pilon 157155..157157 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9863.t1Ggra9863.t1Gracilaria gracilis GNS1m malepolypeptidetig00000170_pilon 156504..157157 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9863.t1 ID=Ggra9863.t1|Name=Ggra9863.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=218bp
MRPPIRPRRVRVAKKHTSASSDWQWSGARSSWRTIFTMDNRAFLNALETF
AASCVESSLLARVTKLGARVLRRISDAFERAWYPDVEKELVVDYGLAEPS
PTDKTYVHPLSEWEISHVNYYRDSFGRRVYLQLDGASAVLSAMDYRDVYE
VGPLGDDDEHDVQDNLTLRATDCDEQTHNLQPEHELHVDHSLHIPPAFYE
VRVQPPPLPSQPDQHTT*
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spliced messenger RNA

>Ggra9863.t1 ID=Ggra9863.t1|Name=Ggra9863.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=654bp|location=Sequence derived from alignment at tig00000170_pilon:156504..157157- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGCCTCCTATACGCCCCCGTCGCGTGCGCGTTGCCAAGAAGCATAC
CAGTGCCAGTAGTGACTGGCAGTGGTCTGGCGCGCGCTCTTCTTGGAGAA
CAATCTTCACCATGGATAACAGAGCCTTTCTCAACGCGCTGGAGACGTTT
GCCGCTTCTTGCGTGGAGTCGTCTCTGTTGGCGCGCGTCACCAAGTTGGG
CGCGCGCGTTTTGAGGAGGATCTCCGATGCTTTTGAACGTGCGTGGTATC
CGGATGTTGAGAAGGAACTCGTCGTTGATTACGGCCTTGCCGAACCTTCG
CCCACCGACAAGACCTACGTGCATCCCTTGTCAGAATGGGAGATTAGCCA
TGTAAATTACTATAGGGATTCGTTTGGAAGGAGGGTTTATCTGCAGCTCG
ATGGTGCTTCTGCCGTTTTGTCCGCCATGGATTATCGAGATGTTTACGAA
GTCGGTCCGCTTGGCGATGATGATGAACATGATGTACAGGATAACCTCAC
CTTGCGAGCAACTGACTGTGATGAACAAACCCACAATCTTCAACCCGAAC
ACGAACTGCATGTGGATCATAGTCTTCACATACCACCTGCGTTCTACGAA
GTGCGCGTCCAACCACCACCACTGCCATCGCAACCAGATCAGCATACAAC
TTGA
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protein sequence of Ggra9863.t1

>Ggra9863.t1 ID=Ggra9863.t1|Name=Ggra9863.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=218bp
MRPPIRPRRVRVAKKHTSASSDWQWSGARSSWRTIFTMDNRAFLNALETF
AASCVESSLLARVTKLGARVLRRISDAFERAWYPDVEKELVVDYGLAEPS
PTDKTYVHPLSEWEISHVNYYRDSFGRRVYLQLDGASAVLSAMDYRDVYE
VGPLGDDDEHDVQDNLTLRATDCDEQTHNLQPEHELHVDHSLHIPPAFYE
VRVQPPPLPSQPDQHTT*
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mRNA from alignment at tig00000170_pilon:156504..157157-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9863.t1 ID=Ggra9863.t1|Name=Ggra9863.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=654bp|location=Sequence derived from alignment at tig00000170_pilon:156504..157157- (Gracilaria gracilis GNS1m male)
ATGAGGCCTCCTATACGCCCCCGTCGCGTGCGCGTTGCCAAGAAGCATAC
CAGTGCCAGTAGTGACTGGCAGTGGTCTGGCGCGCGCTCTTCTTGGAGAA
CAATCTTCACCATGGATAACAGAGCCTTTCTCAACGCGCTGGAGACGTTT
GCCGCTTCTTGCGTGGAGTCGTCTCTGTTGGCGCGCGTCACCAAGTTGGG
CGCGCGCGTTTTGAGGAGGATCTCCGATGCTTTTGAACGTGCGTGGTATC
CGGATGTTGAGAAGGAACTCGTCGTTGATTACGGCCTTGCCGAACCTTCG
CCCACCGACAAGACCTACGTGCATCCCTTGTCAGAATGGGAGATTAGCCA
TGTAAATTACTATAGGGATTCGTTTGGAAGGAGGGTTTATCTGCAGCTCG
ATGGTGCTTCTGCCGTTTTGTCCGCCATGGATTATCGAGATGTTTACGAA
GTCGGTCCGCTTGGCGATGATGATGAACATGATGTACAGGATAACCTCAC
CTTGCGAGCAACTGACTGTGATGAACAAACCCACAATCTTCAACCCGAAC
ACGAACTGCATGTGGATCATAGTCTTCACATACCACCTGCGTTCTACGAA
GTGCGCGTCCAACCACCACCACTGCCATCGCAACCAGATCAGCATACAAC
TTGA
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Coding sequence (CDS) from alignment at tig00000170_pilon:156504..157157-

>Ggra9863.t1 ID=Ggra9863.t1|Name=Ggra9863.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=654bp|location=Sequence derived from alignment at tig00000170_pilon:156504..157157- (Gracilaria gracilis GNS1m male)
ATGAGGCCTCCTATACGCCCCCGTCGCGTGCGCGTTGCCAAGAAGCATAC
CAGTGCCAGTAGTGACTGGCAGTGGTCTGGCGCGCGCTCTTCTTGGAGAA
CAATCTTCACCATGGATAACAGAGCCTTTCTCAACGCGCTGGAGACGTTT
GCCGCTTCTTGCGTGGAGTCGTCTCTGTTGGCGCGCGTCACCAAGTTGGG
CGCGCGCGTTTTGAGGAGGATCTCCGATGCTTTTGAACGTGCGTGGTATC
CGGATGTTGAGAAGGAACTCGTCGTTGATTACGGCCTTGCCGAACCTTCG
CCCACCGACAAGACCTACGTGCATCCCTTGTCAGAATGGGAGATTAGCCA
TGTAAATTACTATAGGGATTCGTTTGGAAGGAGGGTTTATCTGCAGCTCG
ATGGTGCTTCTGCCGTTTTGTCCGCCATGGATTATCGAGATGTTTACGAA
GTCGGTCCGCTTGGCGATGATGATGAACATGATGTACAGGATAACCTCAC
CTTGCGAGCAACTGACTGTGATGAACAAACCCACAATCTTCAACCCGAAC
ACGAACTGCATGTGGATCATAGTCTTCACATACCACCTGCGTTCTACGAA
GTGCGCGTCCAACCACCACCACTGCCATCGCAACCAGATCAGCATACAAC
TTGA
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