Ggra9860.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9860.t1
Unique NameGgra9860.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length415
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000170_piloncontigtig00000170_pilon:150349..151593 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9860Ggra9860Gracilaria gracilis GNS1m malegenetig00000170_pilon 150349..151593 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9860.t1.start1Ggra9860.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000170_pilon 150349..150351 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9860.t1.CDS1Ggra9860.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000170_pilon 150349..151593 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9860.t1.exon1Ggra9860.t1.exon1Gracilaria gracilis GNS1m maleexontig00000170_pilon 150349..151593 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9860.t1.stop1Ggra9860.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000170_pilon 151591..151593 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9860.t1Ggra9860.t1Gracilaria gracilis GNS1m malepolypeptidetig00000170_pilon 150349..151593 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9860.t1 ID=Ggra9860.t1|Name=Ggra9860.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=415bp
MQGRNWFESRENEEGESKEGRRNREYLRLIFNHSEKVIDKTLRQCGGVYS
YAYDELVRVHGHGTPGRKRIGVDGYSSSTGGVRIGNAWVPPMAGLPPAGA
KRLTEGSRAIEQETESNESMVGSLHWKRERLRKACGHIDRFKKWQAAPHE
FWSKEWGDTYEGFLKAQRELGVLRDEISDRRWFGEEDEYLCDRALTGLRK
TLSFMVKNSAREWYRRWGELDLHRLSEREALKSMSEIMKQRPWREVRIVA
GQKQHVGDDHNSEGVLYELIHRLFDDGARRDGRASGAELRRDWGAAGAQR
GAAADAEDAKLAEEIRRAVQRCAAEVRFYSNGAAVHLRKRRRAARSRRSL
SLERRGGGGGGGGGVGARDDDDGDDDDDDDDDDVALLRRTRSWRQRSWRR
GGGAAGVVDDAHAR*
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spliced messenger RNA

>Ggra9860.t1 ID=Ggra9860.t1|Name=Ggra9860.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1245bp|location=Sequence derived from alignment at tig00000170_pilon:150349..151593+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAAGGTAGGAATTGGTTTGAAAGTAGAGAGAATGAAGAAGGGGAAAG
CAAGGAAGGAAGGAGAAACAGGGAATATCTACGACTAATATTCAACCATA
GTGAAAAAGTGATAGACAAGACGTTGAGGCAATGCGGAGGTGTGTATTCA
TACGCGTATGATGAGTTGGTAAGAGTACACGGACATGGCACACCAGGGAG
AAAACGAATTGGGGTTGATGGATATAGTAGCAGTACAGGAGGCGTACGTA
TTGGAAACGCGTGGGTGCCACCGATGGCGGGACTGCCTCCAGCGGGGGCG
AAGCGATTGACAGAGGGTTCTCGCGCGATTGAACAGGAGACGGAATCAAA
CGAGAGCATGGTAGGCAGTTTGCACTGGAAGAGGGAGCGTTTACGTAAAG
CGTGTGGACACATTGATCGTTTCAAGAAGTGGCAGGCAGCGCCGCACGAG
TTTTGGAGCAAGGAATGGGGCGACACGTACGAGGGTTTCCTGAAAGCGCA
GCGCGAGCTAGGCGTTCTACGTGACGAAATCTCGGACAGGAGGTGGTTTG
GGGAGGAGGACGAATATCTATGCGACCGCGCTTTGACGGGGCTGAGAAAA
ACACTGAGCTTCATGGTGAAGAACAGCGCGCGCGAGTGGTACAGACGATG
GGGAGAGCTGGACTTACACCGACTATCCGAGCGCGAGGCGCTGAAAAGCA
TGAGCGAAATCATGAAACAGCGGCCGTGGAGGGAGGTGAGAATCGTGGCA
GGACAGAAACAACACGTCGGCGACGACCACAATTCAGAGGGCGTGCTGTA
CGAGCTCATCCACCGGCTGTTCGACGACGGCGCGCGCCGAGACGGCCGCG
CCAGCGGCGCTGAATTGCGGCGCGACTGGGGCGCGGCCGGCGCGCAGCGC
GGCGCGGCGGCCGACGCGGAGGACGCAAAGCTGGCGGAGGAAATCAGGCG
CGCGGTGCAACGGTGCGCGGCGGAGGTGCGCTTCTACTCCAACGGCGCGG
CGGTGCACCTGAGGAAGCGGCGGCGCGCGGCGCGCTCGCGACGCAGCCTC
AGTCTGGAGCGTCGCGGCGGCGGCGGCGGTGGTGGAGGTGGTGTTGGGGC
GCGGgacgacgacgacggcgatgacgacgacgacgatgacgacgacgacg
TGGCGCTGCTGCGACGCACGCGGTCGTGGCGGCAGCGCAGCTGGCGAAGG
GGGGGGGGAGCGGCTGGCGTCGTAGACGATGCACATGCGCGATAA
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protein sequence of Ggra9860.t1

>Ggra9860.t1 ID=Ggra9860.t1|Name=Ggra9860.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=415bp
MQGRNWFESRENEEGESKEGRRNREYLRLIFNHSEKVIDKTLRQCGGVYS
YAYDELVRVHGHGTPGRKRIGVDGYSSSTGGVRIGNAWVPPMAGLPPAGA
KRLTEGSRAIEQETESNESMVGSLHWKRERLRKACGHIDRFKKWQAAPHE
FWSKEWGDTYEGFLKAQRELGVLRDEISDRRWFGEEDEYLCDRALTGLRK
TLSFMVKNSAREWYRRWGELDLHRLSEREALKSMSEIMKQRPWREVRIVA
GQKQHVGDDHNSEGVLYELIHRLFDDGARRDGRASGAELRRDWGAAGAQR
GAAADAEDAKLAEEIRRAVQRCAAEVRFYSNGAAVHLRKRRRAARSRRSL
SLERRGGGGGGGGGVGARDDDDGDDDDDDDDDDVALLRRTRSWRQRSWRR
GGGAAGVVDDAHAR*
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mRNA from alignment at tig00000170_pilon:150349..151593+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9860.t1 ID=Ggra9860.t1|Name=Ggra9860.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1245bp|location=Sequence derived from alignment at tig00000170_pilon:150349..151593+ (Gracilaria gracilis GNS1m male)
ATGCAAGGTAGGAATTGGTTTGAAAGTAGAGAGAATGAAGAAGGGGAAAG
CAAGGAAGGAAGGAGAAACAGGGAATATCTACGACTAATATTCAACCATA
GTGAAAAAGTGATAGACAAGACGTTGAGGCAATGCGGAGGTGTGTATTCA
TACGCGTATGATGAGTTGGTAAGAGTACACGGACATGGCACACCAGGGAG
AAAACGAATTGGGGTTGATGGATATAGTAGCAGTACAGGAGGCGTACGTA
TTGGAAACGCGTGGGTGCCACCGATGGCGGGACTGCCTCCAGCGGGGGCG
AAGCGATTGACAGAGGGTTCTCGCGCGATTGAACAGGAGACGGAATCAAA
CGAGAGCATGGTAGGCAGTTTGCACTGGAAGAGGGAGCGTTTACGTAAAG
CGTGTGGACACATTGATCGTTTCAAGAAGTGGCAGGCAGCGCCGCACGAG
TTTTGGAGCAAGGAATGGGGCGACACGTACGAGGGTTTCCTGAAAGCGCA
GCGCGAGCTAGGCGTTCTACGTGACGAAATCTCGGACAGGAGGTGGTTTG
GGGAGGAGGACGAATATCTATGCGACCGCGCTTTGACGGGGCTGAGAAAA
ACACTGAGCTTCATGGTGAAGAACAGCGCGCGCGAGTGGTACAGACGATG
GGGAGAGCTGGACTTACACCGACTATCCGAGCGCGAGGCGCTGAAAAGCA
TGAGCGAAATCATGAAACAGCGGCCGTGGAGGGAGGTGAGAATCGTGGCA
GGACAGAAACAACACGTCGGCGACGACCACAATTCAGAGGGCGTGCTGTA
CGAGCTCATCCACCGGCTGTTCGACGACGGCGCGCGCCGAGACGGCCGCG
CCAGCGGCGCTGAATTGCGGCGCGACTGGGGCGCGGCCGGCGCGCAGCGC
GGCGCGGCGGCCGACGCGGAGGACGCAAAGCTGGCGGAGGAAATCAGGCG
CGCGGTGCAACGGTGCGCGGCGGAGGTGCGCTTCTACTCCAACGGCGCGG
CGGTGCACCTGAGGAAGCGGCGGCGCGCGGCGCGCTCGCGACGCAGCCTC
AGTCTGGAGCGTCGCGGCGGCGGCGGCGGTGGTGGAGGTGGTGTTGGGGC
GCGGgacgacgacgacggcgatgacgacgacgacgatgacgacgacgacg
TGGCGCTGCTGCGACGCACGCGGTCGTGGCGGCAGCGCAGCTGGCGAAGG
GGGGGGGGAGCGGCTGGCGTCGTAGACGATGCACATGCGCGATAA
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Coding sequence (CDS) from alignment at tig00000170_pilon:150349..151593+

>Ggra9860.t1 ID=Ggra9860.t1|Name=Ggra9860.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1245bp|location=Sequence derived from alignment at tig00000170_pilon:150349..151593+ (Gracilaria gracilis GNS1m male)
ATGCAAGGTAGGAATTGGTTTGAAAGTAGAGAGAATGAAGAAGGGGAAAG
CAAGGAAGGAAGGAGAAACAGGGAATATCTACGACTAATATTCAACCATA
GTGAAAAAGTGATAGACAAGACGTTGAGGCAATGCGGAGGTGTGTATTCA
TACGCGTATGATGAGTTGGTAAGAGTACACGGACATGGCACACCAGGGAG
AAAACGAATTGGGGTTGATGGATATAGTAGCAGTACAGGAGGCGTACGTA
TTGGAAACGCGTGGGTGCCACCGATGGCGGGACTGCCTCCAGCGGGGGCG
AAGCGATTGACAGAGGGTTCTCGCGCGATTGAACAGGAGACGGAATCAAA
CGAGAGCATGGTAGGCAGTTTGCACTGGAAGAGGGAGCGTTTACGTAAAG
CGTGTGGACACATTGATCGTTTCAAGAAGTGGCAGGCAGCGCCGCACGAG
TTTTGGAGCAAGGAATGGGGCGACACGTACGAGGGTTTCCTGAAAGCGCA
GCGCGAGCTAGGCGTTCTACGTGACGAAATCTCGGACAGGAGGTGGTTTG
GGGAGGAGGACGAATATCTATGCGACCGCGCTTTGACGGGGCTGAGAAAA
ACACTGAGCTTCATGGTGAAGAACAGCGCGCGCGAGTGGTACAGACGATG
GGGAGAGCTGGACTTACACCGACTATCCGAGCGCGAGGCGCTGAAAAGCA
TGAGCGAAATCATGAAACAGCGGCCGTGGAGGGAGGTGAGAATCGTGGCA
GGACAGAAACAACACGTCGGCGACGACCACAATTCAGAGGGCGTGCTGTA
CGAGCTCATCCACCGGCTGTTCGACGACGGCGCGCGCCGAGACGGCCGCG
CCAGCGGCGCTGAATTGCGGCGCGACTGGGGCGCGGCCGGCGCGCAGCGC
GGCGCGGCGGCCGACGCGGAGGACGCAAAGCTGGCGGAGGAAATCAGGCG
CGCGGTGCAACGGTGCGCGGCGGAGGTGCGCTTCTACTCCAACGGCGCGG
CGGTGCACCTGAGGAAGCGGCGGCGCGCGGCGCGCTCGCGACGCAGCCTC
AGTCTGGAGCGTCGCGGCGGCGGCGGCGGTGGTGGAGGTGGTGTTGGGGC
GCGGgacgacgacgacggcgatgacgacgacgacgatgacgacgacgacg
TGGCGCTGCTGCGACGCACGCGGTCGTGGCGGCAGCGCAGCTGGCGAAGG
GGGGGGGGAGCGGCTGGCGTCGTAGACGATGCACATGCGCGATAA
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