Ggra9859.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9859.t1
Unique NameGgra9859.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length151
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000170_piloncontigtig00000170_pilon:147734..148186 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9859Ggra9859Gracilaria gracilis GNS1m malegenetig00000170_pilon 147734..148186 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9859.t1.stop1Ggra9859.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000170_pilon 147734..147736 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9859.t1.CDS1Ggra9859.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000170_pilon 147734..148186 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9859.t1.exon1Ggra9859.t1.exon1Gracilaria gracilis GNS1m maleexontig00000170_pilon 147734..148186 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9859.t1.start1Ggra9859.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000170_pilon 148184..148186 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9859.t1Ggra9859.t1Gracilaria gracilis GNS1m malepolypeptidetig00000170_pilon 147734..148186 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9859.t1 ID=Ggra9859.t1|Name=Ggra9859.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=151bp
MARVSKKALRPRSYVLGRITPERLQRLRGGVRKLLERERLERLSARAAVR
AVERIEAQRHAENILAGVQEAQPASEHVRALVKELDELRQKKLSLFAALK
KKLDDEAAANHAKLTENGPNRGSENAAMSSKDANSHQTMRANHAPHSNLS
*
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spliced messenger RNA

>Ggra9859.t1 ID=Ggra9859.t1|Name=Ggra9859.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=453bp|location=Sequence derived from alignment at tig00000170_pilon:147734..148186- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTAGAGTCTCCAAAAAAGCCCTTCGTCCTCGCTCCTACGTGCTGGG
TCGCATAACCCCCGAGCGTCTTCAACGTCTTCGAGGCGGCGTTCGGAAGC
TGTTGGAAAGAGAACGTCTCGAGAGGTTAAGCGCACGAGCCGCCGTTCGA
GCTGTAGAACGAATTGAGGCTCAGAGACACGCCGAGAATATCCTCGCCGG
TGTGCAAGAAGCACAGCCAGCAAGCGAACATGTGCGCGCTCTCGTGAAGG
AATTGGACGAATTACGGCAGAAGAAACTGAGTTTGTTTGCCGCGCTCAAG
AAGAAATTGGATGACGAGGCCGCTGCCAATCATGCTAAGCTCACTGAAAA
CGGCCCCAATCGTGGCTCGGAGAACGCCGCCATGTCGTCCAAAGATGCCA
ATTCACACCAAACCATGCGCGCAAATCATGCTCCACACTCAAACTTGAGT
TAA
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protein sequence of Ggra9859.t1

>Ggra9859.t1 ID=Ggra9859.t1|Name=Ggra9859.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=151bp
MARVSKKALRPRSYVLGRITPERLQRLRGGVRKLLERERLERLSARAAVR
AVERIEAQRHAENILAGVQEAQPASEHVRALVKELDELRQKKLSLFAALK
KKLDDEAAANHAKLTENGPNRGSENAAMSSKDANSHQTMRANHAPHSNLS
*
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mRNA from alignment at tig00000170_pilon:147734..148186-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9859.t1 ID=Ggra9859.t1|Name=Ggra9859.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=453bp|location=Sequence derived from alignment at tig00000170_pilon:147734..148186- (Gracilaria gracilis GNS1m male)
ATGGCTAGAGTCTCCAAAAAAGCCCTTCGTCCTCGCTCCTACGTGCTGGG
TCGCATAACCCCCGAGCGTCTTCAACGTCTTCGAGGCGGCGTTCGGAAGC
TGTTGGAAAGAGAACGTCTCGAGAGGTTAAGCGCACGAGCCGCCGTTCGA
GCTGTAGAACGAATTGAGGCTCAGAGACACGCCGAGAATATCCTCGCCGG
TGTGCAAGAAGCACAGCCAGCAAGCGAACATGTGCGCGCTCTCGTGAAGG
AATTGGACGAATTACGGCAGAAGAAACTGAGTTTGTTTGCCGCGCTCAAG
AAGAAATTGGATGACGAGGCCGCTGCCAATCATGCTAAGCTCACTGAAAA
CGGCCCCAATCGTGGCTCGGAGAACGCCGCCATGTCGTCCAAAGATGCCA
ATTCACACCAAACCATGCGCGCAAATCATGCTCCACACTCAAACTTGAGT
TAA
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Coding sequence (CDS) from alignment at tig00000170_pilon:147734..148186-

>Ggra9859.t1 ID=Ggra9859.t1|Name=Ggra9859.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=453bp|location=Sequence derived from alignment at tig00000170_pilon:147734..148186- (Gracilaria gracilis GNS1m male)
ATGGCTAGAGTCTCCAAAAAAGCCCTTCGTCCTCGCTCCTACGTGCTGGG
TCGCATAACCCCCGAGCGTCTTCAACGTCTTCGAGGCGGCGTTCGGAAGC
TGTTGGAAAGAGAACGTCTCGAGAGGTTAAGCGCACGAGCCGCCGTTCGA
GCTGTAGAACGAATTGAGGCTCAGAGACACGCCGAGAATATCCTCGCCGG
TGTGCAAGAAGCACAGCCAGCAAGCGAACATGTGCGCGCTCTCGTGAAGG
AATTGGACGAATTACGGCAGAAGAAACTGAGTTTGTTTGCCGCGCTCAAG
AAGAAATTGGATGACGAGGCCGCTGCCAATCATGCTAAGCTCACTGAAAA
CGGCCCCAATCGTGGCTCGGAGAACGCCGCCATGTCGTCCAAAGATGCCA
ATTCACACCAAACCATGCGCGCAAATCATGCTCCACACTCAAACTTGAGT
TAA
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