Ggra9832.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9832.t1
Unique NameGgra9832.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length88
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000160_piloncontigtig00000160_pilon:191012..191275 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9832Ggra9832Gracilaria gracilis GNS1m malegenetig00000160_pilon 191012..191275 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9832.t1.start1Ggra9832.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000160_pilon 191012..191014 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9832.t1.CDS1Ggra9832.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000160_pilon 191012..191275 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9832.t1.exon1Ggra9832.t1.exon1Gracilaria gracilis GNS1m maleexontig00000160_pilon 191012..191275 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9832.t1.stop1Ggra9832.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000160_pilon 191273..191275 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9832.t1Ggra9832.t1Gracilaria gracilis GNS1m malepolypeptidetig00000160_pilon 191012..191275 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9832.t1 ID=Ggra9832.t1|Name=Ggra9832.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=88bp
MSLNTIFSLPAEQKADEVVDSPKNPIPCEVMLVSDAKADEASAKVAESEE
ELVVRPLAERLGLYPCEGLETSSDEEAGESAFVQVDM*
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spliced messenger RNA

>Ggra9832.t1 ID=Ggra9832.t1|Name=Ggra9832.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=264bp|location=Sequence derived from alignment at tig00000160_pilon:191012..191275+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCTTAAACACAATATTCAGTCTTCCTGCCGAGCAAAAGGCAGATGA
GGTAGTAGACAGCCCGAAGAACCCTATACCATGCGAAGTAATGCTTGTTA
GTGATGCAAAAGCGGATGAAGCGTCCGCCAAAGTGGCGGAAAGCGAAGAA
GAACTGGTTGTGCGGCCGCTAGCGGAGCGTCTAGGCCTATATCCATGCGA
AGGTTTGGAGACCTCAAGTGATGAAGAAGCCGGCGAAAGCGCATTTGTAC
AGGTGGATATGTAG
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protein sequence of Ggra9832.t1

>Ggra9832.t1 ID=Ggra9832.t1|Name=Ggra9832.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=88bp
MSLNTIFSLPAEQKADEVVDSPKNPIPCEVMLVSDAKADEASAKVAESEE
ELVVRPLAERLGLYPCEGLETSSDEEAGESAFVQVDM*
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mRNA from alignment at tig00000160_pilon:191012..191275+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9832.t1 ID=Ggra9832.t1|Name=Ggra9832.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=264bp|location=Sequence derived from alignment at tig00000160_pilon:191012..191275+ (Gracilaria gracilis GNS1m male)
ATGTCCTTAAACACAATATTCAGTCTTCCTGCCGAGCAAAAGGCAGATGA
GGTAGTAGACAGCCCGAAGAACCCTATACCATGCGAAGTAATGCTTGTTA
GTGATGCAAAAGCGGATGAAGCGTCCGCCAAAGTGGCGGAAAGCGAAGAA
GAACTGGTTGTGCGGCCGCTAGCGGAGCGTCTAGGCCTATATCCATGCGA
AGGTTTGGAGACCTCAAGTGATGAAGAAGCCGGCGAAAGCGCATTTGTAC
AGGTGGATATGTAG
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Coding sequence (CDS) from alignment at tig00000160_pilon:191012..191275+

>Ggra9832.t1 ID=Ggra9832.t1|Name=Ggra9832.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=264bp|location=Sequence derived from alignment at tig00000160_pilon:191012..191275+ (Gracilaria gracilis GNS1m male)
ATGTCCTTAAACACAATATTCAGTCTTCCTGCCGAGCAAAAGGCAGATGA
GGTAGTAGACAGCCCGAAGAACCCTATACCATGCGAAGTAATGCTTGTTA
GTGATGCAAAAGCGGATGAAGCGTCCGCCAAAGTGGCGGAAAGCGAAGAA
GAACTGGTTGTGCGGCCGCTAGCGGAGCGTCTAGGCCTATATCCATGCGA
AGGTTTGGAGACCTCAAGTGATGAAGAAGCCGGCGAAAGCGCATTTGTAC
AGGTGGATATGTAG
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