Ggra9825.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9825.t1
Unique NameGgra9825.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length531
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000160_piloncontigtig00000160_pilon:102183..103775 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog1453501.JELR01000002_gene98
Max annot lvl1236|Gammaproteobacteria
Evalue6.38e-69
EggNOG OGsCOG2931@1|root,COG2931@2|Bacteria,1QX4P@1224|Proteobacteria,1T5MB@1236|Gammaproteobacteria
Descriptioncalcium- and calmodulin-responsive adenylate cyclase activity
COG categoryQ
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9825Ggra9825Gracilaria gracilis GNS1m malegenetig00000160_pilon 102183..103775 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9825.t1.stop1Ggra9825.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000160_pilon 102183..102185 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9825.t1.CDS1Ggra9825.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000160_pilon 102183..103775 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9825.t1.exon1Ggra9825.t1.exon1Gracilaria gracilis GNS1m maleexontig00000160_pilon 102183..103775 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9825.t1.start1Ggra9825.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000160_pilon 103773..103775 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9825.t1Ggra9825.t1Gracilaria gracilis GNS1m malepolypeptidetig00000160_pilon 102183..103775 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9825.t1 ID=Ggra9825.t1|Name=Ggra9825.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=531bp
MIKFALLFLGLLAIANAECMNKTENTIDRESSVFAFVAFPRVFDSLTIDS
LETPIQFRAILYLSMATYNAWTSYHPTAVDIFGRSRFRRPANEHTRENKN
LAVLYALLRVYEESPHSFGGDSGIPLYRDLMEELGYDPDDRSTDLATPIG
IGNRAGWDTARLMKIDGWNAEGDLTADQAQDNYRQFFSDYTDYTPFNNPW
KINFPFKWQPMLENNGRGFFFRQEFVAPYAGSAISFSLSPEQVENRKVRS
PYRKDTASVDEALPRDIKTLRRHARKLLSVSENMTEKQRVFAELFDNKAK
AFRTKENPAGIASIATAVRFSLVGPALDLNLDEEIIYGMGSNFASFDSLM
TAWKEKRRVDAIRPTGQTMKFLFGNRKFKVWGGPGKKPVMIKAGEWQPYI
RTMPHSDIPSGSSCSCTAVVEFALANTKGRDLFPYKFTVPKGSSKFYPGQ
VPSEDIEIEINHLSEWADLCGKSRLWAGVHFEPAIKAGADLCKGIGQASQ
DLMDKLVSGEADFTWLKWLPEDVERFWEED*
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spliced messenger RNA

>Ggra9825.t1 ID=Ggra9825.t1|Name=Ggra9825.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1593bp|location=Sequence derived from alignment at tig00000160_pilon:102183..103775- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATCAAGTTCGCTCTTCTCTTCCTCGGCCTCTTGGCCATCGCCAACGC
AGAATGCATGAACAAAACAGAGAACACAATCGATCGCGAGAGTTCTGTCT
TCGCCTTTGTGGCCTTCCCACGCGTCTTCGACTCACTCACCATTGACTCC
CTCGAGACTCCAATTCAATTCCGAGCTATCCTGTACCTCAGCATGGCTAC
ATACAACGCTTGGACTAGCTATCATCCGACGGCTGTGGATATCTTTGGCC
GATCTCGTTTCAGACGCCCGGCCAATGAACATACTCGTGAAAACAAGAAT
CTCGCCGTCTTGTATGCCCTACTACGTGTGTACGAGGAATCCCCGCACAG
TTTTGGAGGTGATTCCGGAATCCCGCTTTACAGAGACCTCATGGAGGAAC
TCGGATATGATCCGGATGATCGCTCTACTGACCTTGCTACCCCAATCGGT
ATCGGTAATCGGGCAGGCTGGGACACTGCTCGTCTAATGAAGATTGACGG
ATGGAATGCTGAAGGTGATCTTACTGCCGATCAAGCTCAAGATAATTACA
GGCAGTTCTTTTCGGACTACACAGATTACACTCCTTTCAACAACCCATGG
AAAATTAATTTCCCGTTCAAATGGCAACCAATGCTTGAGAACAATGGCAG
AGGTTTCTTCTTCCGTCAAGAGTTCGTTGCCCCCTACGCTGGATCCGCTA
TTTCCTTCAGTCTTTCTCCTGAGCAAGTAGAAAACCGCAAGGTCAGATCA
CCGTATCGCAAGGACACTGCCTCCGTCGACGAAGCTCTTCCAAGGGATAT
CAAAACTTTGCGTCGTCATGCTAGGAAGTTACTCAGTGTGTCAGAAAATA
TGACTGAGAAGCAAAGAGTGTTTGCTGAATTGTTTGACAACAAGGCCAAG
GCCTTCCGTACCAAGGAAAATCCAGCCGGCATCGCAAGCATTGCTACGGC
AGTGCGATTTTCGCTGGTTGGTCCCGCCCTTGACTTGAATTTAGATGAGG
AAATCATTTACGGTATGGGTTCGAACTTCGCTTCATTCGACTCCTTGATG
ACTGCTTGGAAGGAGAAGCGCCGTGTTGATGCTATCAGACCTACTGGACA
AACCATGAAGTTCTTATTTGGGAACCGGAAATTCAAAGTCTGGGGTGGAC
CAGGCAAGAAACCCGTCATGATCAAGGCTGGAGAATGGCAGCCATACATT
CGCACCATGCCCCACTCAGACATTCCCTCTGGGTCTTCCTGTTCGTGCAC
TGCCGTCGTTGAATTCGCATTAGCCAATACCAAGGGCCGGGACTTATTCC
CGTACAAGTTCACAGTCCCGAAAGGTTCTAGCAAGTTCTATCCCGGACAA
GTTCCATCCGAGGACATAGAAATTGAGATCAACCATCTCTCAGAATGGGC
CGATCTTTGCGGAAAGTCAAGGTTGTGGGCCGGCGTTCATTTTGAACCCG
CCATTAAAGCTGGAGCAGACCTCTGCAAGGGCATCGGTCAAGCCTCTCAA
GACTTGATGGATAAGCTTGTCTCCGGCGAGGCAGATTTCACATGGTTGAA
GTGGCTTCCAGAGGATGTGGAAAGGTTCTGGGAAGAAGACTAG
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protein sequence of Ggra9825.t1

>Ggra9825.t1 ID=Ggra9825.t1|Name=Ggra9825.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=531bp
MIKFALLFLGLLAIANAECMNKTENTIDRESSVFAFVAFPRVFDSLTIDS
LETPIQFRAILYLSMATYNAWTSYHPTAVDIFGRSRFRRPANEHTRENKN
LAVLYALLRVYEESPHSFGGDSGIPLYRDLMEELGYDPDDRSTDLATPIG
IGNRAGWDTARLMKIDGWNAEGDLTADQAQDNYRQFFSDYTDYTPFNNPW
KINFPFKWQPMLENNGRGFFFRQEFVAPYAGSAISFSLSPEQVENRKVRS
PYRKDTASVDEALPRDIKTLRRHARKLLSVSENMTEKQRVFAELFDNKAK
AFRTKENPAGIASIATAVRFSLVGPALDLNLDEEIIYGMGSNFASFDSLM
TAWKEKRRVDAIRPTGQTMKFLFGNRKFKVWGGPGKKPVMIKAGEWQPYI
RTMPHSDIPSGSSCSCTAVVEFALANTKGRDLFPYKFTVPKGSSKFYPGQ
VPSEDIEIEINHLSEWADLCGKSRLWAGVHFEPAIKAGADLCKGIGQASQ
DLMDKLVSGEADFTWLKWLPEDVERFWEED*
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mRNA from alignment at tig00000160_pilon:102183..103775-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9825.t1 ID=Ggra9825.t1|Name=Ggra9825.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1593bp|location=Sequence derived from alignment at tig00000160_pilon:102183..103775- (Gracilaria gracilis GNS1m male)
ATGATCAAGTTCGCTCTTCTCTTCCTCGGCCTCTTGGCCATCGCCAACGC
AGAATGCATGAACAAAACAGAGAACACAATCGATCGCGAGAGTTCTGTCT
TCGCCTTTGTGGCCTTCCCACGCGTCTTCGACTCACTCACCATTGACTCC
CTCGAGACTCCAATTCAATTCCGAGCTATCCTGTACCTCAGCATGGCTAC
ATACAACGCTTGGACTAGCTATCATCCGACGGCTGTGGATATCTTTGGCC
GATCTCGTTTCAGACGCCCGGCCAATGAACATACTCGTGAAAACAAGAAT
CTCGCCGTCTTGTATGCCCTACTACGTGTGTACGAGGAATCCCCGCACAG
TTTTGGAGGTGATTCCGGAATCCCGCTTTACAGAGACCTCATGGAGGAAC
TCGGATATGATCCGGATGATCGCTCTACTGACCTTGCTACCCCAATCGGT
ATCGGTAATCGGGCAGGCTGGGACACTGCTCGTCTAATGAAGATTGACGG
ATGGAATGCTGAAGGTGATCTTACTGCCGATCAAGCTCAAGATAATTACA
GGCAGTTCTTTTCGGACTACACAGATTACACTCCTTTCAACAACCCATGG
AAAATTAATTTCCCGTTCAAATGGCAACCAATGCTTGAGAACAATGGCAG
AGGTTTCTTCTTCCGTCAAGAGTTCGTTGCCCCCTACGCTGGATCCGCTA
TTTCCTTCAGTCTTTCTCCTGAGCAAGTAGAAAACCGCAAGGTCAGATCA
CCGTATCGCAAGGACACTGCCTCCGTCGACGAAGCTCTTCCAAGGGATAT
CAAAACTTTGCGTCGTCATGCTAGGAAGTTACTCAGTGTGTCAGAAAATA
TGACTGAGAAGCAAAGAGTGTTTGCTGAATTGTTTGACAACAAGGCCAAG
GCCTTCCGTACCAAGGAAAATCCAGCCGGCATCGCAAGCATTGCTACGGC
AGTGCGATTTTCGCTGGTTGGTCCCGCCCTTGACTTGAATTTAGATGAGG
AAATCATTTACGGTATGGGTTCGAACTTCGCTTCATTCGACTCCTTGATG
ACTGCTTGGAAGGAGAAGCGCCGTGTTGATGCTATCAGACCTACTGGACA
AACCATGAAGTTCTTATTTGGGAACCGGAAATTCAAAGTCTGGGGTGGAC
CAGGCAAGAAACCCGTCATGATCAAGGCTGGAGAATGGCAGCCATACATT
CGCACCATGCCCCACTCAGACATTCCCTCTGGGTCTTCCTGTTCGTGCAC
TGCCGTCGTTGAATTCGCATTAGCCAATACCAAGGGCCGGGACTTATTCC
CGTACAAGTTCACAGTCCCGAAAGGTTCTAGCAAGTTCTATCCCGGACAA
GTTCCATCCGAGGACATAGAAATTGAGATCAACCATCTCTCAGAATGGGC
CGATCTTTGCGGAAAGTCAAGGTTGTGGGCCGGCGTTCATTTTGAACCCG
CCATTAAAGCTGGAGCAGACCTCTGCAAGGGCATCGGTCAAGCCTCTCAA
GACTTGATGGATAAGCTTGTCTCCGGCGAGGCAGATTTCACATGGTTGAA
GTGGCTTCCAGAGGATGTGGAAAGGTTCTGGGAAGAAGACTAG
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Coding sequence (CDS) from alignment at tig00000160_pilon:102183..103775-

>Ggra9825.t1 ID=Ggra9825.t1|Name=Ggra9825.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1593bp|location=Sequence derived from alignment at tig00000160_pilon:102183..103775- (Gracilaria gracilis GNS1m male)
ATGATCAAGTTCGCTCTTCTCTTCCTCGGCCTCTTGGCCATCGCCAACGC
AGAATGCATGAACAAAACAGAGAACACAATCGATCGCGAGAGTTCTGTCT
TCGCCTTTGTGGCCTTCCCACGCGTCTTCGACTCACTCACCATTGACTCC
CTCGAGACTCCAATTCAATTCCGAGCTATCCTGTACCTCAGCATGGCTAC
ATACAACGCTTGGACTAGCTATCATCCGACGGCTGTGGATATCTTTGGCC
GATCTCGTTTCAGACGCCCGGCCAATGAACATACTCGTGAAAACAAGAAT
CTCGCCGTCTTGTATGCCCTACTACGTGTGTACGAGGAATCCCCGCACAG
TTTTGGAGGTGATTCCGGAATCCCGCTTTACAGAGACCTCATGGAGGAAC
TCGGATATGATCCGGATGATCGCTCTACTGACCTTGCTACCCCAATCGGT
ATCGGTAATCGGGCAGGCTGGGACACTGCTCGTCTAATGAAGATTGACGG
ATGGAATGCTGAAGGTGATCTTACTGCCGATCAAGCTCAAGATAATTACA
GGCAGTTCTTTTCGGACTACACAGATTACACTCCTTTCAACAACCCATGG
AAAATTAATTTCCCGTTCAAATGGCAACCAATGCTTGAGAACAATGGCAG
AGGTTTCTTCTTCCGTCAAGAGTTCGTTGCCCCCTACGCTGGATCCGCTA
TTTCCTTCAGTCTTTCTCCTGAGCAAGTAGAAAACCGCAAGGTCAGATCA
CCGTATCGCAAGGACACTGCCTCCGTCGACGAAGCTCTTCCAAGGGATAT
CAAAACTTTGCGTCGTCATGCTAGGAAGTTACTCAGTGTGTCAGAAAATA
TGACTGAGAAGCAAAGAGTGTTTGCTGAATTGTTTGACAACAAGGCCAAG
GCCTTCCGTACCAAGGAAAATCCAGCCGGCATCGCAAGCATTGCTACGGC
AGTGCGATTTTCGCTGGTTGGTCCCGCCCTTGACTTGAATTTAGATGAGG
AAATCATTTACGGTATGGGTTCGAACTTCGCTTCATTCGACTCCTTGATG
ACTGCTTGGAAGGAGAAGCGCCGTGTTGATGCTATCAGACCTACTGGACA
AACCATGAAGTTCTTATTTGGGAACCGGAAATTCAAAGTCTGGGGTGGAC
CAGGCAAGAAACCCGTCATGATCAAGGCTGGAGAATGGCAGCCATACATT
CGCACCATGCCCCACTCAGACATTCCCTCTGGGTCTTCCTGTTCGTGCAC
TGCCGTCGTTGAATTCGCATTAGCCAATACCAAGGGCCGGGACTTATTCC
CGTACAAGTTCACAGTCCCGAAAGGTTCTAGCAAGTTCTATCCCGGACAA
GTTCCATCCGAGGACATAGAAATTGAGATCAACCATCTCTCAGAATGGGC
CGATCTTTGCGGAAAGTCAAGGTTGTGGGCCGGCGTTCATTTTGAACCCG
CCATTAAAGCTGGAGCAGACCTCTGCAAGGGCATCGGTCAAGCCTCTCAA
GACTTGATGGATAAGCTTGTCTCCGGCGAGGCAGATTTCACATGGTTGAA
GTGGCTTCCAGAGGATGTGGAAAGGTTCTGGGAAGAAGACTAG
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