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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 9913.ENSBTAP00000008383 |
Preferred name | TUBGCP2 |
PFAMs | Spc97_Spc98 |
Max annot lvl | 33208|Metazoa |
KEGG ko | ko:K16569 |
GOs | GO:0000003,GO:0000226,GO:0000278,GO:0000280,GO:0000923,GO:0000930,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005874,GO:0005875,GO:0005881,GO:0006996,GO:0007010,GO:0007017,GO:0007020,GO:0007049,GO:0007051,GO:0007052,GO:0007098,GO:0007276,GO:0007283,GO:0008017,GO:0008092,GO:0008150,GO:0008275,GO:0009987,GO:0015630,GO:0015631,GO:0016043,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0030953,GO:0031023,GO:0031109,GO:0031122,GO:0031974,GO:0031981,GO:0032153,GO:0032155,GO:0032501,GO:0032504,GO:0032991,GO:0034622,GO:0043015,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044703,GO:0046785,GO:0048232,GO:0048285,GO:0048609,GO:0050789,GO:0050794,GO:0051225,GO:0051258,GO:0051298,GO:0051321,GO:0051415,GO:0051418,GO:0051704,GO:0051726,GO:0065003,GO:0065007,GO:0070013,GO:0070925,GO:0071840,GO:0090307,GO:0097435,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140014,GO:1902850,GO:1903047 |
Evalue | 6.53e-67 |
EggNOG OGs | KOG2001@1|root,KOG2001@2759|Eukaryota,38DYI@33154|Opisthokonta,3B9AM@33208|Metazoa,3CXP7@33213|Bilateria,487RP@7711|Chordata,494MR@7742|Vertebrata,3JAET@40674|Mammalia,4IYF2@91561|Cetartiodactyla |
Description | Gamma-tubulin complex component 2 |
COG category | Z |
BRITE | ko00000,ko03036,ko04147,ko04812 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra9809.t1.start1 | Ggra9809.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000236_pilon 61964..61966 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra9809.t1 ID=Ggra9809.t1|Name=Ggra9809.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=756bp MAPASSSSGSSSGSSSSSSIAAPKPPPPPPPPPPPPPPARDASPAWDSQR PYLTGAFLSQPPSPLPSPLPSPPGVGDGHEQQQHAAAVQDALYALMGVRP ALCAVHSVGSPPQLTFTAAGAAAAALPRDAAALLARLLPLATQHARVAAF VERFRVARRSTGHVRQAVATAMHALLHEYRQLLLRLPDGAPSLQALLYGV QPAARAMALLAAVAARLAGAHGGAALDALQRLAAAHVGAPPQHALLARLL AAAATPLLAALQTWLLHGRVDDPHRELFIRHDARYARAAAVSAAAAAWQL RFSINRDLLPHFLAELAPTILRAGKYLNVLRECGVSPSPPAAAAADGDDE RSLLACAPQLLQRSAQRRMRAFVQRAYHSAAEQLMSHLTHTVRLPQRLAS LRNFFLCAAGDYVAQLLHVARHELAKPRPAVSRARLASLLELCIRAGVNG ADPFAHHITCVLADHSLADELATVDHHHHHHHHQQQLQQQQQQPICGYDA FALHYRLEWPLSLVVSDTELLKYQFVFRYLFRLKHVQRELQRCWTLHMRA RRSLPRVAPSLVRSFALRNRMLHFVRSMLYHAAADVLEPNWRRLHAAVQR ARTIDAIMRAHARFLHAAVTQCLLSNGRLLQLLWALLHVCTAFGAYSARF HALLTDRTHDAHGVQARLLQRGYPAALAKFETTFDLQLAKLMDALSAASS SRANVHLANLCQRLDGGRYYSSLKQRSLASFGHLQPQQPQPQQPQQPQQP QQQQI* back to topspliced messenger RNA >Ggra9809.t1 ID=Ggra9809.t1|Name=Ggra9809.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2268bp|location=Sequence derived from alignment at tig00000236_pilon:59699..61966- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCACCCGCCAGCAGCAGCAGCGGCAGCAGCAGCGGCAGCAGCAGCAG CAGCAGCATCGCCGCGCCTAAACCGCCGCCGCCGCCGCCGCCGCCGCCAC CGCCGCCACCGCCAGCGCGCGACGCCTCGCCCGCATGGGACTCGCAGCGC CCGTACCTCACCGGCGCCTTTCTGTCGCAGCCGCCTTCGCCTTTGCCTTC GCCTTTGCCTTCGCCGCCGGGCGTCGGCGACGGCCACGAGCAGCAGCAGC ACGCGGCGGCCGTGCAGGACGCGCTGTACGCGCTAATGGGCGTGCGACCG GCGCTGTGCGCCGTGCACAGCGTCGGCTCGCCGCCGCAGCTCACGTTCAC AGCGGCGGGCGCAGCAGCGGCGGCGCTGCCGCGCGACGCGGCGGCGCTGC TGGCGCGGCTGCTTCCGCTGGCCACGCAGCACGCGCGCGTGGCGGCGTTT GTGGAGCGCTTCCGCGTGGCGCGTCGCAGCACGGGGCACGTGCGACAGGC GGTGGCCACCGCCATGCACGCGCTGCTGCACGAGTACCGCCAGCTACTAC TGCGGCTGCCCGACGGCGCGCCGTCGCTGCAGGCGCTGCTGTACGGCGTG CAGCCCGCGGCGCGCGCCATGGCGCTGCTGGCGGCGGTGGCGGCGCGGCT GGCCGGCGCGCACGGCGGCGCCGCGCTGGACGCGCTGCAGCGACTGGCCG CGGCGCATGTGGGCGCGCCGCCGCAGCACGCGCTGCTGGCGCGGCTGTTG GCCGCCGCCGCCACGCCGCTGCTGGCCGCGCTGCAGACGTGGCTGCTGCA CGGCCGCGTGGACGACCCGCACCGCGAACTGTTCATCCGACACGACGCGC GCTATGCGCGCGCCGCCGCCGTCTCCGCCGCCGCCGCCGCGTGGCAGCTG CGCTTTTCCATCAACCGCGACCTGCTGCCGCACTTTCTGGCAGAGTTGGC GCCCACCATCCTGCGCGCCGGCAAGTACCTCAACGTGCTCCGCGAGTGCG GCGTGTCGCCATCGCCGCCCGCCGCCGCCGCCGCCGATGGCGACGACGAG CGCTCGCTGCTGGCGTGCGCGCCGCAGCTGCTGCAGCGCAGCGCGCAGCG CCGCATGCGCGCATTTGTGCAGCGCGCGTACCACAGCGCCGCCGAGCAGC TGATGAGCCACCTGACGCACACCGTGCGGCTGCCACAGCGGCTGGCGTCG CTGCGCAACTTCTTCCTGTGCGCCGCCGGAGACTACGTGGCGCAGCTGCT GCACGTGGCGCGCCACGAGCTGGCCAAGCCGCGCCCCGCCGTGTCGCGTG CGCGCCTGGCGTCGCTGCTCGAGCTGTGCATTCGCGCCGGCGTCAACGGT GCCGACCCGTTTGCGCACCACATCACCTGCGTGTTGGCCGACCACTCCCT GGCCGACGAGCTCGCCACCGTCGACCACCACCACCACCACCACCACCACC AGCAGCAGCTGCAGCAGCAGCAGCAGCAGCCCATCTGCGGCTACGACGCG TTCGCGCTGCATTACCGCCTCGAGTGGCCGCTCAGTCTGGTGGTGTCCGA CACGGAGCTGCTCAAGTACCAGTTTGTGTTCCGCTACCTGTTCCGTCTCA AGCACGTGCAGCGCGAGCTGCAGCGCTGCTGGACGCTGCACATGCGCGCG CGTCGCTCGCTGCCGCGCGTGGCGCCGTCGCTGGTGCGCTCGTTCGCGCT GCGAAACCGCATGCTGCACTTTGTGCGCAGCATGCTGTACCACGCGGCGG CCGACGTGCTGGAGCCCAACTGGCGCCGTCTGCACGCCGCCGTGCAGCGC GCGCGCACCATCGACGCCATCATGCGCGCGCACGCGCGCTTCCTGCACGC CGCCGTCACGCAGTGTTTGCTCAGCAACGGCCGCTTGCTGCAGCTGCTGT GGGCGCTGCTGCACGTGTGCACGGCGTTTGGCGCCTATTCGGCGCGCTTC CACGCGTTGCTCACCGACCGAACGCACGACGCGCACGGCGTGCAGGCGCG ACTGCTGCAACGCGGATACCCCGCCGCGCTCGCAAAGTTCGAGACCACGT TTGACTTGCAGCTGGCAAAGCTCATGGACGCGCTGTCGGCCGCTTCCAGC AGCCGCGCCAACGTGCACCTTGCAAACCTGTGCCAGCGCCTCGACGGCGG GCGCTATTACAGCTCGCTCAAGCAACGCTCGTTGGCGTCGTTTGGCCACT TGCAGCCGCAGCAGCCGCAGCCGCAGCAGCCGCAGCAGCCGCAGCAGCCG CAGCAGCAACAAATCTGA back to topprotein sequence of Ggra9809.t1 >Ggra9809.t1 ID=Ggra9809.t1|Name=Ggra9809.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=756bp
MAPASSSSGSSSGSSSSSSIAAPKPPPPPPPPPPPPPPARDASPAWDSQR PYLTGAFLSQPPSPLPSPLPSPPGVGDGHEQQQHAAAVQDALYALMGVRP ALCAVHSVGSPPQLTFTAAGAAAAALPRDAAALLARLLPLATQHARVAAF VERFRVARRSTGHVRQAVATAMHALLHEYRQLLLRLPDGAPSLQALLYGV QPAARAMALLAAVAARLAGAHGGAALDALQRLAAAHVGAPPQHALLARLL AAAATPLLAALQTWLLHGRVDDPHRELFIRHDARYARAAAVSAAAAAWQL RFSINRDLLPHFLAELAPTILRAGKYLNVLRECGVSPSPPAAAAADGDDE RSLLACAPQLLQRSAQRRMRAFVQRAYHSAAEQLMSHLTHTVRLPQRLAS LRNFFLCAAGDYVAQLLHVARHELAKPRPAVSRARLASLLELCIRAGVNG ADPFAHHITCVLADHSLADELATVDHHHHHHHHQQQLQQQQQQPICGYDA FALHYRLEWPLSLVVSDTELLKYQFVFRYLFRLKHVQRELQRCWTLHMRA RRSLPRVAPSLVRSFALRNRMLHFVRSMLYHAAADVLEPNWRRLHAAVQR ARTIDAIMRAHARFLHAAVTQCLLSNGRLLQLLWALLHVCTAFGAYSARF HALLTDRTHDAHGVQARLLQRGYPAALAKFETTFDLQLAKLMDALSAASS SRANVHLANLCQRLDGGRYYSSLKQRSLASFGHLQPQQPQPQQPQQPQQP QQQQI* back to topmRNA from alignment at tig00000236_pilon:59699..61966- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra9809.t1 ID=Ggra9809.t1|Name=Ggra9809.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2268bp|location=Sequence derived from alignment at tig00000236_pilon:59699..61966- (Gracilaria gracilis GNS1m male) ATGGCACCCGCCAGCAGCAGCAGCGGCAGCAGCAGCGGCAGCAGCAGCAG
CAGCAGCATCGCCGCGCCTAAACCGCCGCCGCCGCCGCCGCCGCCGCCAC
CGCCGCCACCGCCAGCGCGCGACGCCTCGCCCGCATGGGACTCGCAGCGC
CCGTACCTCACCGGCGCCTTTCTGTCGCAGCCGCCTTCGCCTTTGCCTTC
GCCTTTGCCTTCGCCGCCGGGCGTCGGCGACGGCCACGAGCAGCAGCAGC
ACGCGGCGGCCGTGCAGGACGCGCTGTACGCGCTAATGGGCGTGCGACCG
GCGCTGTGCGCCGTGCACAGCGTCGGCTCGCCGCCGCAGCTCACGTTCAC
AGCGGCGGGCGCAGCAGCGGCGGCGCTGCCGCGCGACGCGGCGGCGCTGC
TGGCGCGGCTGCTTCCGCTGGCCACGCAGCACGCGCGCGTGGCGGCGTTT
GTGGAGCGCTTCCGCGTGGCGCGTCGCAGCACGGGGCACGTGCGACAGGC
GGTGGCCACCGCCATGCACGCGCTGCTGCACGAGTACCGCCAGCTACTAC
TGCGGCTGCCCGACGGCGCGCCGTCGCTGCAGGCGCTGCTGTACGGCGTG
CAGCCCGCGGCGCGCGCCATGGCGCTGCTGGCGGCGGTGGCGGCGCGGCT
GGCCGGCGCGCACGGCGGCGCCGCGCTGGACGCGCTGCAGCGACTGGCCG
CGGCGCATGTGGGCGCGCCGCCGCAGCACGCGCTGCTGGCGCGGCTGTTG
GCCGCCGCCGCCACGCCGCTGCTGGCCGCGCTGCAGACGTGGCTGCTGCA
CGGCCGCGTGGACGACCCGCACCGCGAACTGTTCATCCGACACGACGCGC
GCTATGCGCGCGCCGCCGCCGTCTCCGCCGCCGCCGCCGCGTGGCAGCTG
CGCTTTTCCATCAACCGCGACCTGCTGCCGCACTTTCTGGCAGAGTTGGC
GCCCACCATCCTGCGCGCCGGCAAGTACCTCAACGTGCTCCGCGAGTGCG
GCGTGTCGCCATCGCCGCCCGCCGCCGCCGCCGCCGATGGCGACGACGAG
CGCTCGCTGCTGGCGTGCGCGCCGCAGCTGCTGCAGCGCAGCGCGCAGCG
CCGCATGCGCGCATTTGTGCAGCGCGCGTACCACAGCGCCGCCGAGCAGC
TGATGAGCCACCTGACGCACACCGTGCGGCTGCCACAGCGGCTGGCGTCG
CTGCGCAACTTCTTCCTGTGCGCCGCCGGAGACTACGTGGCGCAGCTGCT
GCACGTGGCGCGCCACGAGCTGGCCAAGCCGCGCCCCGCCGTGTCGCGTG
CGCGCCTGGCGTCGCTGCTCGAGCTGTGCATTCGCGCCGGCGTCAACGGT
GCCGACCCGTTTGCGCACCACATCACCTGCGTGTTGGCCGACCACTCCCT
GGCCGACGAGCTCGCCACCGTCGACCACCACCACCACCACCACCACCACC
AGCAGCAGCTGCAGCAGCAGCAGCAGCAGCCCATCTGCGGCTACGACGCG
TTCGCGCTGCATTACCGCCTCGAGTGGCCGCTCAGTCTGGTGGTGTCCGA
CACGGAGCTGCTCAAGTACCAGTTTGTGTTCCGCTACCTGTTCCGTCTCA
AGCACGTGCAGCGCGAGCTGCAGCGCTGCTGGACGCTGCACATGCGCGCG
CGTCGCTCGCTGCCGCGCGTGGCGCCGTCGCTGGTGCGCTCGTTCGCGCT
GCGAAACCGCATGCTGCACTTTGTGCGCAGCATGCTGTACCACGCGGCGG
CCGACGTGCTGGAGCCCAACTGGCGCCGTCTGCACGCCGCCGTGCAGCGC
GCGCGCACCATCGACGCCATCATGCGCGCGCACGCGCGCTTCCTGCACGC
CGCCGTCACGCAGTGTTTGCTCAGCAACGGCCGCTTGCTGCAGCTGCTGT
GGGCGCTGCTGCACGTGTGCACGGCGTTTGGCGCCTATTCGGCGCGCTTC
CACGCGTTGCTCACCGACCGAACGCACGACGCGCACGGCGTGCAGGCGCG
ACTGCTGCAACGCGGATACCCCGCCGCGCTCGCAAAGTTCGAGACCACGT
TTGACTTGCAGCTGGCAAAGCTCATGGACGCGCTGTCGGCCGCTTCCAGC
AGCCGCGCCAACGTGCACCTTGCAAACCTGTGCCAGCGCCTCGACGGCGG
GCGCTATTACAGCTCGCTCAAGCAACGCTCGTTGGCGTCGTTTGGCCACT
TGCAGCCGCAGCAGCCGCAGCCGCAGCAGCCGCAGCAGCCGCAGCAGCCG
CAGCAGCAACAAATCTGA back to topCoding sequence (CDS) from alignment at tig00000236_pilon:59699..61966- >Ggra9809.t1 ID=Ggra9809.t1|Name=Ggra9809.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2268bp|location=Sequence derived from alignment at tig00000236_pilon:59699..61966- (Gracilaria gracilis GNS1m male) ATGGCACCCGCCAGCAGCAGCAGCGGCAGCAGCAGCGGCAGCAGCAGCAG CAGCAGCATCGCCGCGCCTAAACCGCCGCCGCCGCCGCCGCCGCCGCCAC CGCCGCCACCGCCAGCGCGCGACGCCTCGCCCGCATGGGACTCGCAGCGC CCGTACCTCACCGGCGCCTTTCTGTCGCAGCCGCCTTCGCCTTTGCCTTC GCCTTTGCCTTCGCCGCCGGGCGTCGGCGACGGCCACGAGCAGCAGCAGC ACGCGGCGGCCGTGCAGGACGCGCTGTACGCGCTAATGGGCGTGCGACCG GCGCTGTGCGCCGTGCACAGCGTCGGCTCGCCGCCGCAGCTCACGTTCAC AGCGGCGGGCGCAGCAGCGGCGGCGCTGCCGCGCGACGCGGCGGCGCTGC TGGCGCGGCTGCTTCCGCTGGCCACGCAGCACGCGCGCGTGGCGGCGTTT GTGGAGCGCTTCCGCGTGGCGCGTCGCAGCACGGGGCACGTGCGACAGGC GGTGGCCACCGCCATGCACGCGCTGCTGCACGAGTACCGCCAGCTACTAC TGCGGCTGCCCGACGGCGCGCCGTCGCTGCAGGCGCTGCTGTACGGCGTG CAGCCCGCGGCGCGCGCCATGGCGCTGCTGGCGGCGGTGGCGGCGCGGCT GGCCGGCGCGCACGGCGGCGCCGCGCTGGACGCGCTGCAGCGACTGGCCG CGGCGCATGTGGGCGCGCCGCCGCAGCACGCGCTGCTGGCGCGGCTGTTG GCCGCCGCCGCCACGCCGCTGCTGGCCGCGCTGCAGACGTGGCTGCTGCA CGGCCGCGTGGACGACCCGCACCGCGAACTGTTCATCCGACACGACGCGC GCTATGCGCGCGCCGCCGCCGTCTCCGCCGCCGCCGCCGCGTGGCAGCTG CGCTTTTCCATCAACCGCGACCTGCTGCCGCACTTTCTGGCAGAGTTGGC GCCCACCATCCTGCGCGCCGGCAAGTACCTCAACGTGCTCCGCGAGTGCG GCGTGTCGCCATCGCCGCCCGCCGCCGCCGCCGCCGATGGCGACGACGAG CGCTCGCTGCTGGCGTGCGCGCCGCAGCTGCTGCAGCGCAGCGCGCAGCG CCGCATGCGCGCATTTGTGCAGCGCGCGTACCACAGCGCCGCCGAGCAGC TGATGAGCCACCTGACGCACACCGTGCGGCTGCCACAGCGGCTGGCGTCG CTGCGCAACTTCTTCCTGTGCGCCGCCGGAGACTACGTGGCGCAGCTGCT GCACGTGGCGCGCCACGAGCTGGCCAAGCCGCGCCCCGCCGTGTCGCGTG CGCGCCTGGCGTCGCTGCTCGAGCTGTGCATTCGCGCCGGCGTCAACGGT GCCGACCCGTTTGCGCACCACATCACCTGCGTGTTGGCCGACCACTCCCT GGCCGACGAGCTCGCCACCGTCGACCACCACCACCACCACCACCACCACC AGCAGCAGCTGCAGCAGCAGCAGCAGCAGCCCATCTGCGGCTACGACGCG TTCGCGCTGCATTACCGCCTCGAGTGGCCGCTCAGTCTGGTGGTGTCCGA CACGGAGCTGCTCAAGTACCAGTTTGTGTTCCGCTACCTGTTCCGTCTCA AGCACGTGCAGCGCGAGCTGCAGCGCTGCTGGACGCTGCACATGCGCGCG CGTCGCTCGCTGCCGCGCGTGGCGCCGTCGCTGGTGCGCTCGTTCGCGCT GCGAAACCGCATGCTGCACTTTGTGCGCAGCATGCTGTACCACGCGGCGG CCGACGTGCTGGAGCCCAACTGGCGCCGTCTGCACGCCGCCGTGCAGCGC GCGCGCACCATCGACGCCATCATGCGCGCGCACGCGCGCTTCCTGCACGC CGCCGTCACGCAGTGTTTGCTCAGCAACGGCCGCTTGCTGCAGCTGCTGT GGGCGCTGCTGCACGTGTGCACGGCGTTTGGCGCCTATTCGGCGCGCTTC CACGCGTTGCTCACCGACCGAACGCACGACGCGCACGGCGTGCAGGCGCG ACTGCTGCAACGCGGATACCCCGCCGCGCTCGCAAAGTTCGAGACCACGT TTGACTTGCAGCTGGCAAAGCTCATGGACGCGCTGTCGGCCGCTTCCAGC AGCCGCGCCAACGTGCACCTTGCAAACCTGTGCCAGCGCCTCGACGGCGG GCGCTATTACAGCTCGCTCAAGCAACGCTCGTTGGCGTCGTTTGGCCACT TGCAGCCGCAGCAGCCGCAGCCGCAGCAGCCGCAGCAGCCGCAGCAGCCG CAGCAGCAACAAATCTGA back to top
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