Ggra9484.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9484.t1
Unique NameGgra9484.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length489
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000873_piloncontigtig00000873_pilon:91468..92934 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9484Ggra9484Gracilaria gracilis GNS1m malegenetig00000873_pilon 91468..92934 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9484.t1.stop1Ggra9484.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000873_pilon 91468..91470 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9484.t1.CDS1Ggra9484.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000873_pilon 91468..92934 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9484.t1.exon1Ggra9484.t1.exon1Gracilaria gracilis GNS1m maleexontig00000873_pilon 91468..92934 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9484.t1.start1Ggra9484.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000873_pilon 92932..92934 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9484.t1Ggra9484.t1Gracilaria gracilis GNS1m malepolypeptidetig00000873_pilon 91468..92934 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9484.t1 ID=Ggra9484.t1|Name=Ggra9484.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=489bp
MEALKEELQRAIDAYSEEAISRYERSLMPMGQEKRIEARSRRQNLVASMA
RLDNDPSGESVEKARDELNFSRIFTWAMQCMTAVSQHVQTKNSGKSSFLE
ELELEAARFDGLDVSQMSDAQISFLMAIATLVDVAAAVYGGEEYGSCLFS
QSRRSKTIRMPLSVLQQAGCKYILTSGLAFIKRGNVYLEVENVRDWGKTK
EIHLSGKEFQTMDRAEMEYVVELEDDVEYLVMGSMTPRTFMEHCKFRGNV
ELATLQPVSLLRNRRMRKWIRKEAGGLMVEATTLSYRLRRIYVNCKWLYM
QDGKLISKDIGAQLTRRADVNVTREPGLVLSESSTWEVGASKVMGTPYLI
HQLRCGTDLPGQDGDMAAKVAAHALIMMNNYHRPDSGPVMNYRACLFLKV
EPNGVKVNDTRWISARLAGWEAVDDAILDPNGDEFDVVQVKSTTGIAHAS
RTGYNRIECSERLTNLTKVYGQFAKGAKHKARVSGVDE*
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spliced messenger RNA

>Ggra9484.t1 ID=Ggra9484.t1|Name=Ggra9484.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1467bp|location=Sequence derived from alignment at tig00000873_pilon:91468..92934- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAAGCACTGAAGGAGGAGCTGCAGCGAGCGATCGATGCCTACTCAGA
AGAAGCCATCTCCAGATATGAACGGTCTCTTATGCCAATGGGGCAAGAGA
AACGAATTGAAGCAAGAAGCAGGAGGCAGAATCTCGTTGCTAGTATGGCG
CGCTTGGACAATGATCCATCTGGCGAATCGGTCGAGAAAGCCAGAGATGA
GCTCAACTTTTCGAGGATATTCACCTGGGCAATGCAGTGCATGACCGCTG
TTTCGCAGCACGTGCAGACGAAAAACTCCGGCAAGAGTTCGTTTCTCGAA
GAGCTTGAACTGGAAGCGGCCAGATTCGACGGCTTAGATGTCAGTCAAAT
GTCAGATGCTCAGATATCGTTTCTGATGGCTATCGCCACTCTTGTCGATG
TGGCAGCAGCGGTTTACGGAGGGGAGGAGTATGGAAGTTGCTTGTTCTCT
CAATCTCGACGAAGCAAAACGATAAGAATGCCTCTCTCTGTTCTGCAGCA
AGCAGGGTGCAAGTACATATTAACCTCTGGATTGGCTTTCATAAAGAGGG
GCAACGTGTACTTGGAAGTTGAAAATGTGCGTGACTGGGGGAAGACGAAA
GAAATTCATCTTAGCGGGAAAGAGTTTCAGACAATGGATAGAGCAGAAAT
GGAGTACGTTGTGGAGTTGGAGGATGACGTGGAGTACTTAGTAATGGGAA
GTATGACTCCCCGTACATTTATGGAACACTGCAAATTTAGAGGAAACGTA
GAGTTGGCTACGCTGCAACCTGTCTCTCTTCTGAGAAATAGGAGAATGAG
GAAGTGGATAAGGAAAGAAGCCGGTGGGTTAATGGTTGAAGCCACAACCT
TGTCGTACCGTCTGCGCAGGATTTATGTGAATTGCAAGTGGCTGTACATG
CAAGATGGGAAATTGATTTCCAAAGATATTGGAGCGCAGTTGACGAGAAG
GGCAGACGTAAATGTGACAAGAGAACCGGGACTAGTTTTAAGTGAGTCCT
CTACGTGGGAAGTGGGTGCATCTAAAGTGATGGGCACACCGTATCTCATT
CACCAGTTACGCTGCGGTACAGACCTACCCGGACAGGATGGCGATATGGC
GGCCAAAGTTGCCGCTCATGCGTTAATCATGATGAACAACTACCATCGCC
CGGACAGTGGGCCAGTGATGAACTATAGAGCTTGTCTATTCTTGAAAGTG
GAACCAAATGGCGTGAAAGTGAATGATACTAGGTGGATTTCAGCAAGACT
GGCAGGTTGGGAGGCGGTAGATGATGCGATCTTAGATCCAAATGGAGATG
AGTTTGATGTGGTGCAGGTCAAATCAACTACTGGAATTGCTCACGCGTCT
CGAACAGGATATAACCGCATAGAGTGCTCGGAACGTTTGACCAACCTGAC
CAAAGTGTACGGGCAGTTTGCAAAAGGCGCAAAACACAAAGCAAGGGTTT
CCGGAGTAGATGAGTAG
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protein sequence of Ggra9484.t1

>Ggra9484.t1 ID=Ggra9484.t1|Name=Ggra9484.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=489bp
MEALKEELQRAIDAYSEEAISRYERSLMPMGQEKRIEARSRRQNLVASMA
RLDNDPSGESVEKARDELNFSRIFTWAMQCMTAVSQHVQTKNSGKSSFLE
ELELEAARFDGLDVSQMSDAQISFLMAIATLVDVAAAVYGGEEYGSCLFS
QSRRSKTIRMPLSVLQQAGCKYILTSGLAFIKRGNVYLEVENVRDWGKTK
EIHLSGKEFQTMDRAEMEYVVELEDDVEYLVMGSMTPRTFMEHCKFRGNV
ELATLQPVSLLRNRRMRKWIRKEAGGLMVEATTLSYRLRRIYVNCKWLYM
QDGKLISKDIGAQLTRRADVNVTREPGLVLSESSTWEVGASKVMGTPYLI
HQLRCGTDLPGQDGDMAAKVAAHALIMMNNYHRPDSGPVMNYRACLFLKV
EPNGVKVNDTRWISARLAGWEAVDDAILDPNGDEFDVVQVKSTTGIAHAS
RTGYNRIECSERLTNLTKVYGQFAKGAKHKARVSGVDE*
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mRNA from alignment at tig00000873_pilon:91468..92934-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9484.t1 ID=Ggra9484.t1|Name=Ggra9484.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1467bp|location=Sequence derived from alignment at tig00000873_pilon:91468..92934- (Gracilaria gracilis GNS1m male)
ATGGAAGCACTGAAGGAGGAGCTGCAGCGAGCGATCGATGCCTACTCAGA
AGAAGCCATCTCCAGATATGAACGGTCTCTTATGCCAATGGGGCAAGAGA
AACGAATTGAAGCAAGAAGCAGGAGGCAGAATCTCGTTGCTAGTATGGCG
CGCTTGGACAATGATCCATCTGGCGAATCGGTCGAGAAAGCCAGAGATGA
GCTCAACTTTTCGAGGATATTCACCTGGGCAATGCAGTGCATGACCGCTG
TTTCGCAGCACGTGCAGACGAAAAACTCCGGCAAGAGTTCGTTTCTCGAA
GAGCTTGAACTGGAAGCGGCCAGATTCGACGGCTTAGATGTCAGTCAAAT
GTCAGATGCTCAGATATCGTTTCTGATGGCTATCGCCACTCTTGTCGATG
TGGCAGCAGCGGTTTACGGAGGGGAGGAGTATGGAAGTTGCTTGTTCTCT
CAATCTCGACGAAGCAAAACGATAAGAATGCCTCTCTCTGTTCTGCAGCA
AGCAGGGTGCAAGTACATATTAACCTCTGGATTGGCTTTCATAAAGAGGG
GCAACGTGTACTTGGAAGTTGAAAATGTGCGTGACTGGGGGAAGACGAAA
GAAATTCATCTTAGCGGGAAAGAGTTTCAGACAATGGATAGAGCAGAAAT
GGAGTACGTTGTGGAGTTGGAGGATGACGTGGAGTACTTAGTAATGGGAA
GTATGACTCCCCGTACATTTATGGAACACTGCAAATTTAGAGGAAACGTA
GAGTTGGCTACGCTGCAACCTGTCTCTCTTCTGAGAAATAGGAGAATGAG
GAAGTGGATAAGGAAAGAAGCCGGTGGGTTAATGGTTGAAGCCACAACCT
TGTCGTACCGTCTGCGCAGGATTTATGTGAATTGCAAGTGGCTGTACATG
CAAGATGGGAAATTGATTTCCAAAGATATTGGAGCGCAGTTGACGAGAAG
GGCAGACGTAAATGTGACAAGAGAACCGGGACTAGTTTTAAGTGAGTCCT
CTACGTGGGAAGTGGGTGCATCTAAAGTGATGGGCACACCGTATCTCATT
CACCAGTTACGCTGCGGTACAGACCTACCCGGACAGGATGGCGATATGGC
GGCCAAAGTTGCCGCTCATGCGTTAATCATGATGAACAACTACCATCGCC
CGGACAGTGGGCCAGTGATGAACTATAGAGCTTGTCTATTCTTGAAAGTG
GAACCAAATGGCGTGAAAGTGAATGATACTAGGTGGATTTCAGCAAGACT
GGCAGGTTGGGAGGCGGTAGATGATGCGATCTTAGATCCAAATGGAGATG
AGTTTGATGTGGTGCAGGTCAAATCAACTACTGGAATTGCTCACGCGTCT
CGAACAGGATATAACCGCATAGAGTGCTCGGAACGTTTGACCAACCTGAC
CAAAGTGTACGGGCAGTTTGCAAAAGGCGCAAAACACAAAGCAAGGGTTT
CCGGAGTAGATGAGTAG
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Coding sequence (CDS) from alignment at tig00000873_pilon:91468..92934-

>Ggra9484.t1 ID=Ggra9484.t1|Name=Ggra9484.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1467bp|location=Sequence derived from alignment at tig00000873_pilon:91468..92934- (Gracilaria gracilis GNS1m male)
ATGGAAGCACTGAAGGAGGAGCTGCAGCGAGCGATCGATGCCTACTCAGA
AGAAGCCATCTCCAGATATGAACGGTCTCTTATGCCAATGGGGCAAGAGA
AACGAATTGAAGCAAGAAGCAGGAGGCAGAATCTCGTTGCTAGTATGGCG
CGCTTGGACAATGATCCATCTGGCGAATCGGTCGAGAAAGCCAGAGATGA
GCTCAACTTTTCGAGGATATTCACCTGGGCAATGCAGTGCATGACCGCTG
TTTCGCAGCACGTGCAGACGAAAAACTCCGGCAAGAGTTCGTTTCTCGAA
GAGCTTGAACTGGAAGCGGCCAGATTCGACGGCTTAGATGTCAGTCAAAT
GTCAGATGCTCAGATATCGTTTCTGATGGCTATCGCCACTCTTGTCGATG
TGGCAGCAGCGGTTTACGGAGGGGAGGAGTATGGAAGTTGCTTGTTCTCT
CAATCTCGACGAAGCAAAACGATAAGAATGCCTCTCTCTGTTCTGCAGCA
AGCAGGGTGCAAGTACATATTAACCTCTGGATTGGCTTTCATAAAGAGGG
GCAACGTGTACTTGGAAGTTGAAAATGTGCGTGACTGGGGGAAGACGAAA
GAAATTCATCTTAGCGGGAAAGAGTTTCAGACAATGGATAGAGCAGAAAT
GGAGTACGTTGTGGAGTTGGAGGATGACGTGGAGTACTTAGTAATGGGAA
GTATGACTCCCCGTACATTTATGGAACACTGCAAATTTAGAGGAAACGTA
GAGTTGGCTACGCTGCAACCTGTCTCTCTTCTGAGAAATAGGAGAATGAG
GAAGTGGATAAGGAAAGAAGCCGGTGGGTTAATGGTTGAAGCCACAACCT
TGTCGTACCGTCTGCGCAGGATTTATGTGAATTGCAAGTGGCTGTACATG
CAAGATGGGAAATTGATTTCCAAAGATATTGGAGCGCAGTTGACGAGAAG
GGCAGACGTAAATGTGACAAGAGAACCGGGACTAGTTTTAAGTGAGTCCT
CTACGTGGGAAGTGGGTGCATCTAAAGTGATGGGCACACCGTATCTCATT
CACCAGTTACGCTGCGGTACAGACCTACCCGGACAGGATGGCGATATGGC
GGCCAAAGTTGCCGCTCATGCGTTAATCATGATGAACAACTACCATCGCC
CGGACAGTGGGCCAGTGATGAACTATAGAGCTTGTCTATTCTTGAAAGTG
GAACCAAATGGCGTGAAAGTGAATGATACTAGGTGGATTTCAGCAAGACT
GGCAGGTTGGGAGGCGGTAGATGATGCGATCTTAGATCCAAATGGAGATG
AGTTTGATGTGGTGCAGGTCAAATCAACTACTGGAATTGCTCACGCGTCT
CGAACAGGATATAACCGCATAGAGTGCTCGGAACGTTTGACCAACCTGAC
CAAAGTGTACGGGCAGTTTGCAAAAGGCGCAAAACACAAAGCAAGGGTTT
CCGGAGTAGATGAGTAG
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