Ggra9392.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ggra9392.t1
Unique Name	Ggra9392.t1
Type	mRNA
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	518

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000883_pilon	contig	tig00000883_pilon:298000..299553 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	45157.CMS484CT
Preferred name	GUK1
PFAMs	Guanylate_kin
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC00002,RC00649
KEGG ko	ko:K00942,ko:K11151,ko:K15538
KEGG Reaction	R00332,R02090,R03048,R08379,R08380
KEGG Pathway	ko00230,ko00830,ko01100,map00230,map00830,map01100
KEGG Module	M00050
GOs	GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006185,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009151,GO:0009152,GO:0009153,GO:0009161,GO:0009162,GO:0009163,GO:0009165,GO:0009167,GO:0009170,GO:0009179,GO:0009180,GO:0009182,GO:0009183,GO:0009185,GO:0009186,GO:0009188,GO:0009189,GO:0009199,GO:0009200,GO:0009201,GO:0009205,GO:0009206,GO:0009215,GO:0009225,GO:0009259,GO:0009260,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015031,GO:0015833,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017144,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019673,GO:0019692,GO:0019693,GO:0033036,GO:0034404,GO:0034436,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046034,GO:0046037,GO:0046039,GO:0046054,GO:0046060,GO:0046066,GO:0046128,GO:0046129,GO:0046385,GO:0046390,GO:0046483,GO:0046710,GO:0046711,GO:0046939,GO:0046940,GO:0050145,GO:0051179,GO:0051234,GO:0055086,GO:0071702,GO:0071704,GO:0071705,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901264,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
Evalue	2.96e-62
EggNOG OGs	COG0194@1\|root,KOG0707@2759\|Eukaryota
EC	2.7.4.8,3.2.1.130
Description	guanylate kinase activity
COG category	F
CAZy	GH99
BRITE	ko00000,ko00001,ko00002,ko01000

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9392	Ggra9392	Gracilaria gracilis GNS1m male	gene	tig00000883_pilon 298000..299553 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9392.t1.stop1	Ggra9392.t1.stop1	Gracilaria gracilis GNS1m male	stop_codon	tig00000883_pilon 298000..298002 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9392.t1.CDS1	Ggra9392.t1.CDS1	Gracilaria gracilis GNS1m male	CDS	tig00000883_pilon 298000..299553 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9392.t1.exon1	Ggra9392.t1.exon1	Gracilaria gracilis GNS1m male	exon	tig00000883_pilon 298000..299553 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9392.t1.start1	Ggra9392.t1.start1	Gracilaria gracilis GNS1m male	start_codon	tig00000883_pilon 299551..299553 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9392.t1	Ggra9392.t1	Gracilaria gracilis GNS1m male	polypeptide	tig00000883_pilon 298000..299553 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000883_pilon:298000..299553-
coding sequence from alignment at tig00000883_pilon:298000..299553-

mRNA sequence

>Ggra9392.t1 ID=Ggra9392.t1|Name=Ggra9392.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=518bp
MAFQASLPLLPARTSYIKTATSKRTNALRLTRLPVQASSTNERLDSRGFV
VPQPGDVVLYAGKWAGEQNAGVVDSVRDAPQRVIVDVQEMRRLSSDLFAI
QSARTRKLKWFDVAQLRVARDAVYVAEQDAYRIPNVPDGYAYVKPMDNEA
RERAAIEYQKLKTSLLNTTLAIGAVGTAVSAVLFGKNLAAAYAYGAATSL
AYLVMLQASVDYLGVPTFFSRFLSFRFALPPLPFALLAISNGARSPSEML
GIVNQQQALAVVLGLLTYKIPFLARTFNEFVDGLSRIEIGKTGMVGTVAA
LAARQIKKMQQDGGDDSLAEASMSKPVFVFAGPSGVGKSTLIHKLMEEFP
QLFQYSVSHTTREPRPNERDGRDYMFVTHEKFEDMINSDQFVEYAHVHGQ
YYGTSYESVNAVLEKGTFCVLDLDIQGVEALRSKVDLSWQPIFVWVAPPD
MNALEERLKNRGTETAQTLRTRLNTAMREMSYAATTNIFDLTIINDDLDE
AYSQLRGFVEYQTKTFS*

spliced messenger RNA

>Ggra9392.t1 ID=Ggra9392.t1|Name=Ggra9392.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1554bp|location=Sequence derived from alignment at tig00000883_pilon:298000..299553- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGTTTCAAGCTAGTCTTCCACTGCTACCGGCGCGAACATCCTATAT
TAAGACAGCAACATCGAAACGCACGAACGCGTTACGTCTGACTCGCCTTC
CCGTACAGGCGTCCTCCACGAATGAACGCTTGGATTCTCGTGGATTCGTG
GTACCCCAACCAGGGGACGTCGTTCTTTACGCCGGAAAATGGGCCGGAGA
ACAGAATGCAGGTGTGGTAGACAGCGTGCGTGACGCCCCACAACGCGTGA
TCGTTGACGTTCAAGAAATGCGTCGACTGAGCAGTGACCTTTTTGCAATA
CAATCTGCTCGCACCAGGAAGCTGAAATGGTTCGACGTAGCACAACTTCG
CGTTGCTCGTGATGCTGTATATGTCGCAGAACAGGATGCATATCGTATTC
CCAATGTCCCTGATGGATATGCTTACGTCAAGCCAATGGATAACGAAGCT
CGTGAACGTGCTGCCATCGAATATCAGAAACTGAAGACCAGTCTTCTAAA
CACTACCTTAGCCATTGGAGCCGTGGGAACTGCAGTCTCAGCTGTTTTGT
TCGGAAAGAACTTGGCTGCAGCCTATGCATATGGCGCAGCGACTTCCCTG
GCGTATCTTGTCATGCTGCAGGCCAGTGTGGATTACCTTGGTGTGCCGAC
ATTCTTCTCACGCTTTCTTTCGTTTCGATTTGCTTTGCCACCGCTCCCAT
TTGCACTACTTGCTATTTCAAATGGGGCAAGGTCGCCATCGGAGATGTTG
GGCATTGTCAATCAACAGCAAGCGCTTGCCGTCGTCTTAGGCTTGCTTAC
GTATAAGATTCCATTCCTTGCGCGCACCTTCAATGAGTTTGTTGACGGAC
TTTCGCGCATTGAAATTGGAAAGACGGGTATGGTGGGCACCGTGGCCGCA
CTTGCCGCTCGTCAGATAAAGAAAATGCAGCAAGATGGTGGCGATGATTC
GCTGGCTGAGGCGTCCATGTCGAAACCAGTTTTCGTTTTTGCTGGACCTT
CTGGTGTTGGAAAATCGACGTTGATACACAAGCTCATGGAGGAATTCCCG
CAACTCTTTCAGTATAGCGTATCTCATACCACTCGTGAACCACGTCCCAA
CGAGCGTGATGGCCGGGATTACATGTTCGTCACTCATGAGAAATTTGAAG
ACATGATAAACTCAGATCAGTTTGTGGAATATGCTCATGTTCACGGGCAG
TACTACGGCACATCATATGAATCTGTAAATGCCGTTTTGGAGAAGGGGAC
ATTTTGTGTTCTCGATTTGGATATTCAGGGAGTTGAAGCTCTGCGCAGCA
AAGTAGACCTCTCATGGCAGCCTATCTTTGTGTGGGTAGCACCACCTGAT
ATGAATGCTCTAGAAGAGAGGTTGAAGAACCGGGGGACAGAAACCGCCCA
AACGCTGAGGACACGTCTTAACACGGCGATGAGAGAGATGTCTTATGCAG
CTACAACTAACATTTTTGATTTGACAATTATCAACGACGACCTCGATGAA
GCATATTCACAACTCAGAGGGTTTGTAGAGTATCAAACTAAAACGTTTTC
GTGA

protein sequence of Ggra9392.t1

>Ggra9392.t1 ID=Ggra9392.t1|Name=Ggra9392.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=518bp
MAFQASLPLLPARTSYIKTATSKRTNALRLTRLPVQASSTNERLDSRGFV
VPQPGDVVLYAGKWAGEQNAGVVDSVRDAPQRVIVDVQEMRRLSSDLFAI
QSARTRKLKWFDVAQLRVARDAVYVAEQDAYRIPNVPDGYAYVKPMDNEA
RERAAIEYQKLKTSLLNTTLAIGAVGTAVSAVLFGKNLAAAYAYGAATSL
AYLVMLQASVDYLGVPTFFSRFLSFRFALPPLPFALLAISNGARSPSEML
GIVNQQQALAVVLGLLTYKIPFLARTFNEFVDGLSRIEIGKTGMVGTVAA
LAARQIKKMQQDGGDDSLAEASMSKPVFVFAGPSGVGKSTLIHKLMEEFP
QLFQYSVSHTTREPRPNERDGRDYMFVTHEKFEDMINSDQFVEYAHVHGQ
YYGTSYESVNAVLEKGTFCVLDLDIQGVEALRSKVDLSWQPIFVWVAPPD
MNALEERLKNRGTETAQTLRTRLNTAMREMSYAATTNIFDLTIINDDLDE
AYSQLRGFVEYQTKTFS*

mRNA from alignment at tig00000883_pilon:298000..299553-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ggra9392.t1 ID=Ggra9392.t1|Name=Ggra9392.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1554bp|location=Sequence derived from alignment at tig00000883_pilon:298000..299553- (Gracilaria gracilis GNS1m male)
ATGGCGTTTCAAGCTAGTCTTCCACTGCTACCGGCGCGAACATCCTATAT
TAAGACAGCAACATCGAAACGCACGAACGCGTTACGTCTGACTCGCCTTC
CCGTACAGGCGTCCTCCACGAATGAACGCTTGGATTCTCGTGGATTCGTG
GTACCCCAACCAGGGGACGTCGTTCTTTACGCCGGAAAATGGGCCGGAGA
ACAGAATGCAGGTGTGGTAGACAGCGTGCGTGACGCCCCACAACGCGTGA
TCGTTGACGTTCAAGAAATGCGTCGACTGAGCAGTGACCTTTTTGCAATA
CAATCTGCTCGCACCAGGAAGCTGAAATGGTTCGACGTAGCACAACTTCG
CGTTGCTCGTGATGCTGTATATGTCGCAGAACAGGATGCATATCGTATTC
CCAATGTCCCTGATGGATATGCTTACGTCAAGCCAATGGATAACGAAGCT
CGTGAACGTGCTGCCATCGAATATCAGAAACTGAAGACCAGTCTTCTAAA
CACTACCTTAGCCATTGGAGCCGTGGGAACTGCAGTCTCAGCTGTTTTGT
TCGGAAAGAACTTGGCTGCAGCCTATGCATATGGCGCAGCGACTTCCCTG
GCGTATCTTGTCATGCTGCAGGCCAGTGTGGATTACCTTGGTGTGCCGAC
ATTCTTCTCACGCTTTCTTTCGTTTCGATTTGCTTTGCCACCGCTCCCAT
TTGCACTACTTGCTATTTCAAATGGGGCAAGGTCGCCATCGGAGATGTTG
GGCATTGTCAATCAACAGCAAGCGCTTGCCGTCGTCTTAGGCTTGCTTAC
GTATAAGATTCCATTCCTTGCGCGCACCTTCAATGAGTTTGTTGACGGAC
TTTCGCGCATTGAAATTGGAAAGACGGGTATGGTGGGCACCGTGGCCGCA
CTTGCCGCTCGTCAGATAAAGAAAATGCAGCAAGATGGTGGCGATGATTC
GCTGGCTGAGGCGTCCATGTCGAAACCAGTTTTCGTTTTTGCTGGACCTT
CTGGTGTTGGAAAATCGACGTTGATACACAAGCTCATGGAGGAATTCCCG
CAACTCTTTCAGTATAGCGTATCTCATACCACTCGTGAACCACGTCCCAA
CGAGCGTGATGGCCGGGATTACATGTTCGTCACTCATGAGAAATTTGAAG
ACATGATAAACTCAGATCAGTTTGTGGAATATGCTCATGTTCACGGGCAG
TACTACGGCACATCATATGAATCTGTAAATGCCGTTTTGGAGAAGGGGAC
ATTTTGTGTTCTCGATTTGGATATTCAGGGAGTTGAAGCTCTGCGCAGCA
AAGTAGACCTCTCATGGCAGCCTATCTTTGTGTGGGTAGCACCACCTGAT
ATGAATGCTCTAGAAGAGAGGTTGAAGAACCGGGGGACAGAAACCGCCCA
AACGCTGAGGACACGTCTTAACACGGCGATGAGAGAGATGTCTTATGCAG
CTACAACTAACATTTTTGATTTGACAATTATCAACGACGACCTCGATGAA
GCATATTCACAACTCAGAGGGTTTGTAGAGTATCAAACTAAAACGTTTTC
GTGA

Coding sequence (CDS) from alignment at tig00000883_pilon:298000..299553-

>Ggra9392.t1 ID=Ggra9392.t1|Name=Ggra9392.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1554bp|location=Sequence derived from alignment at tig00000883_pilon:298000..299553- (Gracilaria gracilis GNS1m male)
ATGGCGTTTCAAGCTAGTCTTCCACTGCTACCGGCGCGAACATCCTATAT
TAAGACAGCAACATCGAAACGCACGAACGCGTTACGTCTGACTCGCCTTC
CCGTACAGGCGTCCTCCACGAATGAACGCTTGGATTCTCGTGGATTCGTG
GTACCCCAACCAGGGGACGTCGTTCTTTACGCCGGAAAATGGGCCGGAGA
ACAGAATGCAGGTGTGGTAGACAGCGTGCGTGACGCCCCACAACGCGTGA
TCGTTGACGTTCAAGAAATGCGTCGACTGAGCAGTGACCTTTTTGCAATA
CAATCTGCTCGCACCAGGAAGCTGAAATGGTTCGACGTAGCACAACTTCG
CGTTGCTCGTGATGCTGTATATGTCGCAGAACAGGATGCATATCGTATTC
CCAATGTCCCTGATGGATATGCTTACGTCAAGCCAATGGATAACGAAGCT
CGTGAACGTGCTGCCATCGAATATCAGAAACTGAAGACCAGTCTTCTAAA
CACTACCTTAGCCATTGGAGCCGTGGGAACTGCAGTCTCAGCTGTTTTGT
TCGGAAAGAACTTGGCTGCAGCCTATGCATATGGCGCAGCGACTTCCCTG
GCGTATCTTGTCATGCTGCAGGCCAGTGTGGATTACCTTGGTGTGCCGAC
ATTCTTCTCACGCTTTCTTTCGTTTCGATTTGCTTTGCCACCGCTCCCAT
TTGCACTACTTGCTATTTCAAATGGGGCAAGGTCGCCATCGGAGATGTTG
GGCATTGTCAATCAACAGCAAGCGCTTGCCGTCGTCTTAGGCTTGCTTAC
GTATAAGATTCCATTCCTTGCGCGCACCTTCAATGAGTTTGTTGACGGAC
TTTCGCGCATTGAAATTGGAAAGACGGGTATGGTGGGCACCGTGGCCGCA
CTTGCCGCTCGTCAGATAAAGAAAATGCAGCAAGATGGTGGCGATGATTC
GCTGGCTGAGGCGTCCATGTCGAAACCAGTTTTCGTTTTTGCTGGACCTT
CTGGTGTTGGAAAATCGACGTTGATACACAAGCTCATGGAGGAATTCCCG
CAACTCTTTCAGTATAGCGTATCTCATACCACTCGTGAACCACGTCCCAA
CGAGCGTGATGGCCGGGATTACATGTTCGTCACTCATGAGAAATTTGAAG
ACATGATAAACTCAGATCAGTTTGTGGAATATGCTCATGTTCACGGGCAG
TACTACGGCACATCATATGAATCTGTAAATGCCGTTTTGGAGAAGGGGAC
ATTTTGTGTTCTCGATTTGGATATTCAGGGAGTTGAAGCTCTGCGCAGCA
AAGTAGACCTCTCATGGCAGCCTATCTTTGTGTGGGTAGCACCACCTGAT
ATGAATGCTCTAGAAGAGAGGTTGAAGAACCGGGGGACAGAAACCGCCCA
AACGCTGAGGACACGTCTTAACACGGCGATGAGAGAGATGTCTTATGCAG
CTACAACTAACATTTTTGATTTGACAATTATCAACGACGACCTCGATGAA
GCATATTCACAACTCAGAGGGTTTGTAGAGTATCAAACTAAAACGTTTTC
GTGA