Ggra9364.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9364.t1
Unique NameGgra9364.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length247
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:102064..102804 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9364Ggra9364Gracilaria gracilis GNS1m malegenetig00000883_pilon 102064..102804 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9364.t1.start1Ggra9364.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000883_pilon 102064..102066 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9364.t1.CDS1Ggra9364.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000883_pilon 102064..102804 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9364.t1.exon1Ggra9364.t1.exon1Gracilaria gracilis GNS1m maleexontig00000883_pilon 102064..102804 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9364.t1.stop1Ggra9364.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000883_pilon 102802..102804 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9364.t1Ggra9364.t1Gracilaria gracilis GNS1m malepolypeptidetig00000883_pilon 102064..102804 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9364.t1 ID=Ggra9364.t1|Name=Ggra9364.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=247bp
MNRVIYHLKQAPSRTWTRTNATASRTHVRTTISRKQLLYIPRKTKEEMMA
LHEEDPQRWNTTTLSKRFGAPAENVQSLLKLHALRKHREKQIQQCEGEER
ERIEGLREKMLDSWSDLAEFVMRTRRIADASRLATSEKGAEETEEEEDDN
AEEQAICDEEEVEIEEVAHSKWGAFLEKGIEDAALDTPRKCTYAFVEIGK
GEENVRRAVWLREGESGRLRLADEAERTLLLNQVRAKESEAFAATK*
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spliced messenger RNA

>Ggra9364.t1 ID=Ggra9364.t1|Name=Ggra9364.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=741bp|location=Sequence derived from alignment at tig00000883_pilon:102064..102804+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAATCGCGTCATCTACCACTTGAAACAAGCGCCCTCGAGAACATGGAC
GCGAACGAACGCGACAGCAAGCCGGACGCACGTGAGAACAACGATTTCTC
GAAAGCAACTGCTGTACATTCCGCGCAAGACGAAGGAAGAAATGATGGCA
CTACATGAAGAAGATCCGCAACGTTGGAACACGACGACGCTTTCGAAACG
ATTCGGGGCGCCGGCGGAGAACGTACAGAGTTTATTAAAACTGCATGCGC
TTCGCAAGCATCGTGAGAAACAGATACAACAGTGTGAAGGGGAAGAACGG
GAACGAATTGAAGGTCTGAGAGAGAAGATGTTGGATTCATGGAGTGATTT
AGCGGAGTTTGTAATGCGTACTAGACGTATTGCAGATGCTAGTCGTTTGG
CTACGAGTGAGAAAGGTGCAGAAGAAACggaggaggaggaggacgataat
gcggaggagCAAGCTATATGTGATGAAGAGGAGGTGGAGATTGAAGAGGT
TGCTCACAGTAAGTGGGGAGCGTTCCTGGAGAAAGGGATCGAAGACGCAG
CACTTGATACGCCCAGGAAATGTACTTATGCGTTCGTGGAGATTGGAAAG
GGAGAGGAAAATGTGAGAAGAGCGGTGTGGTTGAGAGAAGGTGAGAGCGG
ACGACTACGACTAGCAGACGAAGCGGAAAGAACTCTGCTTCTGAACCAAG
TGCGAGCAAAAGAGAGTGAAGCGTTTGCTGCGACCAAGTAA
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protein sequence of Ggra9364.t1

>Ggra9364.t1 ID=Ggra9364.t1|Name=Ggra9364.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=247bp
MNRVIYHLKQAPSRTWTRTNATASRTHVRTTISRKQLLYIPRKTKEEMMA
LHEEDPQRWNTTTLSKRFGAPAENVQSLLKLHALRKHREKQIQQCEGEER
ERIEGLREKMLDSWSDLAEFVMRTRRIADASRLATSEKGAEETEEEEDDN
AEEQAICDEEEVEIEEVAHSKWGAFLEKGIEDAALDTPRKCTYAFVEIGK
GEENVRRAVWLREGESGRLRLADEAERTLLLNQVRAKESEAFAATK*
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mRNA from alignment at tig00000883_pilon:102064..102804+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9364.t1 ID=Ggra9364.t1|Name=Ggra9364.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=741bp|location=Sequence derived from alignment at tig00000883_pilon:102064..102804+ (Gracilaria gracilis GNS1m male)
ATGAATCGCGTCATCTACCACTTGAAACAAGCGCCCTCGAGAACATGGAC
GCGAACGAACGCGACAGCAAGCCGGACGCACGTGAGAACAACGATTTCTC
GAAAGCAACTGCTGTACATTCCGCGCAAGACGAAGGAAGAAATGATGGCA
CTACATGAAGAAGATCCGCAACGTTGGAACACGACGACGCTTTCGAAACG
ATTCGGGGCGCCGGCGGAGAACGTACAGAGTTTATTAAAACTGCATGCGC
TTCGCAAGCATCGTGAGAAACAGATACAACAGTGTGAAGGGGAAGAACGG
GAACGAATTGAAGGTCTGAGAGAGAAGATGTTGGATTCATGGAGTGATTT
AGCGGAGTTTGTAATGCGTACTAGACGTATTGCAGATGCTAGTCGTTTGG
CTACGAGTGAGAAAGGTGCAGAAGAAACggaggaggaggaggacgataat
gcggaggagCAAGCTATATGTGATGAAGAGGAGGTGGAGATTGAAGAGGT
TGCTCACAGTAAGTGGGGAGCGTTCCTGGAGAAAGGGATCGAAGACGCAG
CACTTGATACGCCCAGGAAATGTACTTATGCGTTCGTGGAGATTGGAAAG
GGAGAGGAAAATGTGAGAAGAGCGGTGTGGTTGAGAGAAGGTGAGAGCGG
ACGACTACGACTAGCAGACGAAGCGGAAAGAACTCTGCTTCTGAACCAAG
TGCGAGCAAAAGAGAGTGAAGCGTTTGCTGCGACCAAGTAA
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Coding sequence (CDS) from alignment at tig00000883_pilon:102064..102804+

>Ggra9364.t1 ID=Ggra9364.t1|Name=Ggra9364.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=741bp|location=Sequence derived from alignment at tig00000883_pilon:102064..102804+ (Gracilaria gracilis GNS1m male)
ATGAATCGCGTCATCTACCACTTGAAACAAGCGCCCTCGAGAACATGGAC
GCGAACGAACGCGACAGCAAGCCGGACGCACGTGAGAACAACGATTTCTC
GAAAGCAACTGCTGTACATTCCGCGCAAGACGAAGGAAGAAATGATGGCA
CTACATGAAGAAGATCCGCAACGTTGGAACACGACGACGCTTTCGAAACG
ATTCGGGGCGCCGGCGGAGAACGTACAGAGTTTATTAAAACTGCATGCGC
TTCGCAAGCATCGTGAGAAACAGATACAACAGTGTGAAGGGGAAGAACGG
GAACGAATTGAAGGTCTGAGAGAGAAGATGTTGGATTCATGGAGTGATTT
AGCGGAGTTTGTAATGCGTACTAGACGTATTGCAGATGCTAGTCGTTTGG
CTACGAGTGAGAAAGGTGCAGAAGAAACggaggaggaggaggacgataat
gcggaggagCAAGCTATATGTGATGAAGAGGAGGTGGAGATTGAAGAGGT
TGCTCACAGTAAGTGGGGAGCGTTCCTGGAGAAAGGGATCGAAGACGCAG
CACTTGATACGCCCAGGAAATGTACTTATGCGTTCGTGGAGATTGGAAAG
GGAGAGGAAAATGTGAGAAGAGCGGTGTGGTTGAGAGAAGGTGAGAGCGG
ACGACTACGACTAGCAGACGAAGCGGAAAGAACTCTGCTTCTGAACCAAG
TGCGAGCAAAAGAGAGTGAAGCGTTTGCTGCGACCAAGTAA
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