Ggra9315.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9315.t1
Unique NameGgra9315.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length272
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000863_piloncontigtig00000863_pilon:585511..586326 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9315Ggra9315Gracilaria gracilis GNS1m malegenetig00000863_pilon 585511..586326 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9315.t1.start1Ggra9315.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000863_pilon 585511..585513 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9315.t1.CDS1Ggra9315.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000863_pilon 585511..586326 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9315.t1.exon1Ggra9315.t1.exon1Gracilaria gracilis GNS1m maleexontig00000863_pilon 585511..586326 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9315.t1.stop1Ggra9315.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000863_pilon 586324..586326 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9315.t1Ggra9315.t1Gracilaria gracilis GNS1m malepolypeptidetig00000863_pilon 585511..586326 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9315.t1 ID=Ggra9315.t1|Name=Ggra9315.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=272bp
MDGNNDENGVVRKSRRQRRSRFLAQYSSDDESEPWNKADDIAWIARRDEN
GRERYVVCRTNCTLRTFGSVQFDRLMGSDAKRWCYLRPNKKLTSEVAFRW
GIMEDEGYEEVWAIDEVMFISVERIVQRPCGRTQLSRNSYVGRSRDDPEW
GGYPIQLHTMAGLDLVNALIAENVWHGRVNFSTGASEETGTVSISGEAPA
EVLDALDSHCVAHPNTPVRVSVPGRREKTPAGLRFLDDRAEMFVANTDVL
CLHAAVLNAITVHRINGPNKY*
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spliced messenger RNA

>Ggra9315.t1 ID=Ggra9315.t1|Name=Ggra9315.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=816bp|location=Sequence derived from alignment at tig00000863_pilon:585511..586326+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGATGGAAATAACGATGAGAACGGCGTTGTCCGTAAATCCAGGCGGCA
AAGAAGGTCGCGTTTTCTTGCACAGTACTCGTCGGATGACGAGTCGGAAC
CGTGGAACAAGGCTGATGATATCGCATGGATCGCCCGAAGAGACGAGAAC
GGACGTGAGCGATACGTAGTGTGCAGGACAAATTGCACATTGCGCACATT
CGGATCCGTACAATTTGATAGACTCATGGGAAGCGACGCGAAGCGATGGT
GCTATCTGCGCCCAAACAAGAAATTAACGTCAGAGGTTGCGTTTCGCTGG
GGAATCATGGAAGATGAAGGTTACGAGGAGGTTTGGGCCATAGACGAAGT
AATGTTCATCTCAGTAGAACGCATCGTGCAAAGGCCGTGTGGTCGCACGC
AGCTGTCGCGCAACTCGTACGTTGGCAGAAGTCGTGATGATCCGGAGTGG
GGCGGGTATCCTATTCAGCTCCATACCATGGCTGGATTGGATCTTGTGAA
CGCCTTGATTGCCGAGAACGTGTGGCATGGTCGAGTTAATTTCAGCACAG
GTGCGAGCGAGGAAACGGGAACAGTGTCCATTTCTGGCGAGGCCCCCGCG
GAGGTGCTTGACGCGTTGGATTCTCATTGTGTCGCGCACCCGAACACCCC
AGTTCGAGTATCGGTTCCGGGCAGGAGGGAAAAAACTCCAGCAGGTCTCC
GTTTCTTGGACGATCGAGCGGAGATGTTCGTGGCCAATACCGATGTTCTC
TGTCTGCATGCGGCGGTACTGAACGCCAtaactgtccaccgcattaatgg
tcccaacaaatattaa
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protein sequence of Ggra9315.t1

>Ggra9315.t1 ID=Ggra9315.t1|Name=Ggra9315.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=272bp
MDGNNDENGVVRKSRRQRRSRFLAQYSSDDESEPWNKADDIAWIARRDEN
GRERYVVCRTNCTLRTFGSVQFDRLMGSDAKRWCYLRPNKKLTSEVAFRW
GIMEDEGYEEVWAIDEVMFISVERIVQRPCGRTQLSRNSYVGRSRDDPEW
GGYPIQLHTMAGLDLVNALIAENVWHGRVNFSTGASEETGTVSISGEAPA
EVLDALDSHCVAHPNTPVRVSVPGRREKTPAGLRFLDDRAEMFVANTDVL
CLHAAVLNAITVHRINGPNKY*
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mRNA from alignment at tig00000863_pilon:585511..586326+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9315.t1 ID=Ggra9315.t1|Name=Ggra9315.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=816bp|location=Sequence derived from alignment at tig00000863_pilon:585511..586326+ (Gracilaria gracilis GNS1m male)
ATGGATGGAAATAACGATGAGAACGGCGTTGTCCGTAAATCCAGGCGGCA
AAGAAGGTCGCGTTTTCTTGCACAGTACTCGTCGGATGACGAGTCGGAAC
CGTGGAACAAGGCTGATGATATCGCATGGATCGCCCGAAGAGACGAGAAC
GGACGTGAGCGATACGTAGTGTGCAGGACAAATTGCACATTGCGCACATT
CGGATCCGTACAATTTGATAGACTCATGGGAAGCGACGCGAAGCGATGGT
GCTATCTGCGCCCAAACAAGAAATTAACGTCAGAGGTTGCGTTTCGCTGG
GGAATCATGGAAGATGAAGGTTACGAGGAGGTTTGGGCCATAGACGAAGT
AATGTTCATCTCAGTAGAACGCATCGTGCAAAGGCCGTGTGGTCGCACGC
AGCTGTCGCGCAACTCGTACGTTGGCAGAAGTCGTGATGATCCGGAGTGG
GGCGGGTATCCTATTCAGCTCCATACCATGGCTGGATTGGATCTTGTGAA
CGCCTTGATTGCCGAGAACGTGTGGCATGGTCGAGTTAATTTCAGCACAG
GTGCGAGCGAGGAAACGGGAACAGTGTCCATTTCTGGCGAGGCCCCCGCG
GAGGTGCTTGACGCGTTGGATTCTCATTGTGTCGCGCACCCGAACACCCC
AGTTCGAGTATCGGTTCCGGGCAGGAGGGAAAAAACTCCAGCAGGTCTCC
GTTTCTTGGACGATCGAGCGGAGATGTTCGTGGCCAATACCGATGTTCTC
TGTCTGCATGCGGCGGTACTGAACGCCAtaactgtccaccgcattaatgg
tcccaacaaatattaa
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Coding sequence (CDS) from alignment at tig00000863_pilon:585511..586326+

>Ggra9315.t1 ID=Ggra9315.t1|Name=Ggra9315.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=816bp|location=Sequence derived from alignment at tig00000863_pilon:585511..586326+ (Gracilaria gracilis GNS1m male)
ATGGATGGAAATAACGATGAGAACGGCGTTGTCCGTAAATCCAGGCGGCA
AAGAAGGTCGCGTTTTCTTGCACAGTACTCGTCGGATGACGAGTCGGAAC
CGTGGAACAAGGCTGATGATATCGCATGGATCGCCCGAAGAGACGAGAAC
GGACGTGAGCGATACGTAGTGTGCAGGACAAATTGCACATTGCGCACATT
CGGATCCGTACAATTTGATAGACTCATGGGAAGCGACGCGAAGCGATGGT
GCTATCTGCGCCCAAACAAGAAATTAACGTCAGAGGTTGCGTTTCGCTGG
GGAATCATGGAAGATGAAGGTTACGAGGAGGTTTGGGCCATAGACGAAGT
AATGTTCATCTCAGTAGAACGCATCGTGCAAAGGCCGTGTGGTCGCACGC
AGCTGTCGCGCAACTCGTACGTTGGCAGAAGTCGTGATGATCCGGAGTGG
GGCGGGTATCCTATTCAGCTCCATACCATGGCTGGATTGGATCTTGTGAA
CGCCTTGATTGCCGAGAACGTGTGGCATGGTCGAGTTAATTTCAGCACAG
GTGCGAGCGAGGAAACGGGAACAGTGTCCATTTCTGGCGAGGCCCCCGCG
GAGGTGCTTGACGCGTTGGATTCTCATTGTGTCGCGCACCCGAACACCCC
AGTTCGAGTATCGGTTCCGGGCAGGAGGGAAAAAACTCCAGCAGGTCTCC
GTTTCTTGGACGATCGAGCGGAGATGTTCGTGGCCAATACCGATGTTCTC
TGTCTGCATGCGGCGGTACTGAACGCCAtaactgtccaccgcattaatgg
tcccaacaaatattaa
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