Ggra920.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra920.t1
Unique NameGgra920.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length213
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:462653..463291 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra920Ggra920Gracilaria gracilis GNS1m malegenetig00000049_pilon 462653..463291 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra920.t1.stop1Ggra920.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000049_pilon 462653..462655 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra920.t1.CDS1Ggra920.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000049_pilon 462653..463291 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra920.t1.exon1Ggra920.t1.exon1Gracilaria gracilis GNS1m maleexontig00000049_pilon 462653..463291 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra920.t1.start1Ggra920.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000049_pilon 463289..463291 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra920.t1Ggra920.t1Gracilaria gracilis GNS1m malepolypeptidetig00000049_pilon 462653..463291 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra920.t1 ID=Ggra920.t1|Name=Ggra920.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=213bp
MVGEMGGVVLSVSEIGVPMDLISKIWKRMKLAGVGSGRHVSGMVECVGKE
VVKLRRENRQLRGRGEVLEAQVGQGEKAYQLLLEGKEMVTEGGFGRREER
EKESPVTPGPRGRCGRVRGRSGEGDGGEVGVVRLGKRRKGGVMVDEDGKV
CVPRQLLGGASLAGVGSSAAAVRTAELILEEQEKKRLEGIGSRFGARRVY
ENGESVRLESST*
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spliced messenger RNA

>Ggra920.t1 ID=Ggra920.t1|Name=Ggra920.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=639bp|location=Sequence derived from alignment at tig00000049_pilon:462653..463291- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGGGTGAAATGGGAGGGGTGGTGCTGAGTGTGTCTGAGATTGGGGT
GCCAATGGATTTGATTTCGAAGATTTGGAAAAGGATGAAGTTGGCTGGAG
TGGGGAGTGGAAGGCATGTGAGTGGGATGGTAGAGTGCGTTGGGAAGGAG
GTGGTGAAGCTGAGAAGGGAGAATAGGCAGCTGAGGGGTCGTGGGGAGGT
GTTGGAAGCGCAAGTGGGGCAGGGGGAGAAGGCGTACCAATTGTTGTTGG
AGGGGAAGGAGATGGTGACGGAAGGAGGCTTTGGGAGGAGGGAGGAAAGA
GAGAAAGAGTCACCAGTGACGCCAGGTCCTCGTGGTAGATGTGGGCGTGT
GAGGGGGAGGAGCGGAGAAGGGGATGGAGGGGAGGTTGGGGTAGTCCGGC
TGGGAAAGAGGCGAAAGGGTGGGGTGATGGTGGACGAGGATGGGAAGGTG
TGTGTTCCGCGGCAGCTTCTGGGTGGAGCGTCACTAGCTGGGGTTGGTAG
TTCGGCGGCGGCGGTACGAACGGCGGAGCTCATACTGGAGGAGCAGGAAA
AGAAGAGGCTAGAAGGGATTGGGAGCCGCTTTGGGGCCAGAAGGGTGTAC
GAGAATGGAGAGAGTGTTCGGTTAGAGTCTTCAACTTGA
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protein sequence of Ggra920.t1

>Ggra920.t1 ID=Ggra920.t1|Name=Ggra920.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=213bp
MVGEMGGVVLSVSEIGVPMDLISKIWKRMKLAGVGSGRHVSGMVECVGKE
VVKLRRENRQLRGRGEVLEAQVGQGEKAYQLLLEGKEMVTEGGFGRREER
EKESPVTPGPRGRCGRVRGRSGEGDGGEVGVVRLGKRRKGGVMVDEDGKV
CVPRQLLGGASLAGVGSSAAAVRTAELILEEQEKKRLEGIGSRFGARRVY
ENGESVRLESST*
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mRNA from alignment at tig00000049_pilon:462653..463291-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra920.t1 ID=Ggra920.t1|Name=Ggra920.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=639bp|location=Sequence derived from alignment at tig00000049_pilon:462653..463291- (Gracilaria gracilis GNS1m male)
ATGGTGGGTGAAATGGGAGGGGTGGTGCTGAGTGTGTCTGAGATTGGGGT
GCCAATGGATTTGATTTCGAAGATTTGGAAAAGGATGAAGTTGGCTGGAG
TGGGGAGTGGAAGGCATGTGAGTGGGATGGTAGAGTGCGTTGGGAAGGAG
GTGGTGAAGCTGAGAAGGGAGAATAGGCAGCTGAGGGGTCGTGGGGAGGT
GTTGGAAGCGCAAGTGGGGCAGGGGGAGAAGGCGTACCAATTGTTGTTGG
AGGGGAAGGAGATGGTGACGGAAGGAGGCTTTGGGAGGAGGGAGGAAAGA
GAGAAAGAGTCACCAGTGACGCCAGGTCCTCGTGGTAGATGTGGGCGTGT
GAGGGGGAGGAGCGGAGAAGGGGATGGAGGGGAGGTTGGGGTAGTCCGGC
TGGGAAAGAGGCGAAAGGGTGGGGTGATGGTGGACGAGGATGGGAAGGTG
TGTGTTCCGCGGCAGCTTCTGGGTGGAGCGTCACTAGCTGGGGTTGGTAG
TTCGGCGGCGGCGGTACGAACGGCGGAGCTCATACTGGAGGAGCAGGAAA
AGAAGAGGCTAGAAGGGATTGGGAGCCGCTTTGGGGCCAGAAGGGTGTAC
GAGAATGGAGAGAGTGTTCGGTTAGAGTCTTCAACTTGA
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Coding sequence (CDS) from alignment at tig00000049_pilon:462653..463291-

>Ggra920.t1 ID=Ggra920.t1|Name=Ggra920.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=639bp|location=Sequence derived from alignment at tig00000049_pilon:462653..463291- (Gracilaria gracilis GNS1m male)
ATGGTGGGTGAAATGGGAGGGGTGGTGCTGAGTGTGTCTGAGATTGGGGT
GCCAATGGATTTGATTTCGAAGATTTGGAAAAGGATGAAGTTGGCTGGAG
TGGGGAGTGGAAGGCATGTGAGTGGGATGGTAGAGTGCGTTGGGAAGGAG
GTGGTGAAGCTGAGAAGGGAGAATAGGCAGCTGAGGGGTCGTGGGGAGGT
GTTGGAAGCGCAAGTGGGGCAGGGGGAGAAGGCGTACCAATTGTTGTTGG
AGGGGAAGGAGATGGTGACGGAAGGAGGCTTTGGGAGGAGGGAGGAAAGA
GAGAAAGAGTCACCAGTGACGCCAGGTCCTCGTGGTAGATGTGGGCGTGT
GAGGGGGAGGAGCGGAGAAGGGGATGGAGGGGAGGTTGGGGTAGTCCGGC
TGGGAAAGAGGCGAAAGGGTGGGGTGATGGTGGACGAGGATGGGAAGGTG
TGTGTTCCGCGGCAGCTTCTGGGTGGAGCGTCACTAGCTGGGGTTGGTAG
TTCGGCGGCGGCGGTACGAACGGCGGAGCTCATACTGGAGGAGCAGGAAA
AGAAGAGGCTAGAAGGGATTGGGAGCCGCTTTGGGGCCAGAAGGGTGTAC
GAGAATGGAGAGAGTGTTCGGTTAGAGTCTTCAACTTGA
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