|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 1122222.AXWR01000004_gene1697 |
| PFAMs | Inhibitor_I9,Peptidase_S8 |
| Max annot lvl | 1297|Deinococcus-Thermus |
| KEGG ko | ko:K20754 |
| Evalue | 7.04e-67 |
| EggNOG OGs | COG1404@1|root,COG1404@2|Bacteria,1WIDU@1297|Deinococcus-Thermus |
| EC | 3.4.21.111 |
| Description | peptidase S8 and S53, subtilisin, kexin, sedolisin |
| COG category | O |
| BRITE | ko00000,ko01000,ko01002 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra9176.t1.start1 | Ggra9176.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000075_pilon 302746..302748 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra9176.t1.stop1 | Ggra9176.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000075_pilon 305272..305274 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra9176.t1 ID=Ggra9176.t1|Name=Ggra9176.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=843bp MLLASALSGNINDIPTLHPGSAIENSTMGLPRTIEVDGVTKGGQFLFKVD AHQLNALQGEEVRSIVSVTTCSDKYDLDTILLAYGENPLAADDPNELQPV EMNDNDCGLQSTIELLTVSLPVYVLLTGYGGAEGGFELQVNDMKRTPAGV TPWGLDRIDQRRLPLDGQFSVHRGGYGVFVYVLDSGIRTSHREFKNGKGT SRVIPGVDVVDRKHTFSDETGHGTHVAAIVAGTSFGVAKNATLISVRVID RNGRGYTSRLIEGLQWTLDDIQSNNHTPALVVMSLNTKYSASLNEAVEKA NEFGVVVITAAGNSGNDSCLFSPASSKSSISVGATRKDDSRADYSNVGRC LNIYAPGESITSAWHTSDEAERTLSGTSASCPHVAGTVAVLLAENPTMSP ADIQSVLFSTATFSVVGNHTTDKTLNTTSNEVSLTESNRLVYVRAIPSLP TDGDPKEGTMFIYVIYALATSRFLTDACDLSHAKSSSITELFKSHRIASS IDTTVNIKVCCTYASDRRNGCDVEELGNVTRMIVRLQTGDILAGAVFDFL HDFATSQEKTMMLETVLQTKVKLLAEPWVVDARGLKYWTAPTIMQPMQTR LPTSVIISISVAVSVFLFVGFLACAYMYYRRKKAREAAEQEAFRDMATKF ELSDGRHSNLADLEPGACIEYQKEGLKRTNTEINEGMFRHANPDLALPTP RQPLAFSPVGPQSVRSNRKQRSTLSSILGEWGQHSQSTTRERGIGSFSLR RLSFSSKKFPSFITKLTTPRNTKSQKQTSDKKERSILTPVSKQRAGETDS EIDPKISGCEESSRTCELTETPCESVMMSKDDKVRPPLRNKE* back to topspliced messenger RNA >Ggra9176.t1 ID=Ggra9176.t1|Name=Ggra9176.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2529bp|location=Sequence derived from alignment at tig00000075_pilon:302746..305274+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGTTACTTGCCTCAGCTTTGTCCGGGAATATCAATGACATTCCAACTCT GCACCCGGGCTCTGCAATTGAGAATTCTACTATGGGATTGCCGAGGACCA TAGAAGTCGACGGCGTCACTAAAGGTGGTCAGTTTCTCTTCAAAGTTGAT GCCCATCAATTAAATGCCCTTCAGGGTGAAGAAGTACGTAGCATTGTTTC GGTCACTACTTGCTCGGACAAGTACGATTTGGATACTATTCTGTTAGCCT ATGGAGAAAATCCGCTCGCCGCAGATGATCCAAATGAACTGCAACCAGTT GAGATGAACGACAATGACTGTGGACTCCAGTCTACTATAGAGCTTTTGAC TGTTTCTCTTCCAGTCTATGTTCTTCTAACTGGTTATGGGGGTGCAGAGG GCGGGTTTGAACTACAAGTCAACGACATGAAGCGCACTCCAGCCGGAGTT ACTCCCTGGGGTTTGGATCGAATTGATCAGAGGCGTCTCCCTTTGGATGG ACAATTTTCTGTTCATAGAGGCGGATACGGCGTATTTGTATATGTATTGG ACTCGGGAATACGAACGTCGCACAGAGAATTCAAAAATGGAAAAGGAACA TCACGAGTCATCCCAGGAGTTGATGTGGTCGATCGGAAACATACATTTTC GGATGAAACTGGTCATGGTACTCATGTTGCGGCAATTGTCGCTGGAACTT CTTTTGGTGTCGCGAAGAACGCGACTCTAATATCGGTACGCGTCATTGAT CGAAACGGGCGTGGATACACTAGTCGCCTTATTGAAGGACTTCAGTGGAC CTTGGATGACATTCAAAGTAACAATCACACACCAGCTCTGGTCGTGATGT CGTTAAATACGAAGTATTCAGCATCTTTGAATGAAGCTGTCGAAAAAGCG AACGAATTTGGTGTGGTGGTCATCACAGCCGCTGGGAACTCAGGAAATGA CAGTTGTTTGTTTTCACCAGCTTCGAGCAAGTCATCTATATCTGTTGGTG CAACAAGAAAAGATGATAGTCGCGCAGACTATTCAAATGTCGGACGTTGT CTCAACATATATGCACCAGGAGAGTCTATTACTTCTGCCTGGCATACGAG TGATGAGGCAGAAAGGACACTATCAGGGACTTCTGCGTCCTGTCCTCATG TAGCGGGAACGGTCGCAGTGCTGCTTGCAGAAAATCCCACAATGAGTCCA GCCGATATACAATCAGTGCTTTTCTCCACAGCTACATTTTCAGTAGTTGG GAATCACACCACAGATAAAACGCTCAACACTACGAGCAATGAAGTGAGTC TCACTGAAAGTAACAGACTGGTATACGTCAGGGCTATTCCCTCTTTACCT ACTGATGGAGACCCAAAGGAAGGAACAATGTTTATATACGTGATATATGC CCTCGCCACATCAAGATTCTTGACAGATGCTTGCGATCTCTCTCATGCCA AGAGTTCATCCATCACTGAACTCTTCAAGTCCCATAGAATTGCATCATCA ATCGATACTACGGTGAACATCAAAGTATGTTGCACATATGCTTCCGACCG TCGCAATGGCTGTGATGTCGAAGAGCTTGGGAATGTCACTCGAATGATTG TTCGCCTGCAGACTGGTGATATTCTTGCCGGCGCTGTGTTTGACTTTCTT CATGATTTCGCCACGTCTCAAGAAAAAACCATGATGCTGGAGACGGTACT ACAGACGAAGGTGAAACTGTTGGCAGAACCATGGGTTGTTGACGCTAGAG GCCTGAAGTACTGGACAGCTCCTACAATTATGCAGCCTATGCAAACCAGG CTCCCGACATCAGTAATAATTTCAATCTCCGTGGCGGTTAGTGTGTTCTT GTTTGTAGGGTTCTTGGCCTGCGCATACATGTACTACAGGAGGAAGAAAG CTAGGGAAGCTGCTGAACAAGAAGCCTTCCGGGACATGGCGACGAAATTT GAACTGTCCGACGGGCGACATAGCAATCTAGCTGATCTTGAACCTGGAGC TTGTATCGAGTATCAGAAAGAAGGCTTAAAGCGAACAAACACAGAAATCA ACGAAGGGATGTTCAGACATGCCAACCCAGATTTGGCATTGCCAACCCCA CGGCAACCACTCGCCTTTTCACCTGTGGGACCTCAGAGTGTAAGGTCAAA CCGAAAGCAGAGGAGCACGCTATCTAGCATCTTAGGGGAATGGGGCCAAC ACAGTCAAAGCACTACCAGAGAAAGAGGCATAGGTTCTTTTTCATTACGA CGTCTATCCTTTAGTTCGAAGAAGTTCCCGTCGTTTATAACGAAATTAAC CACACCCCGAAATACGAAGTCACAGAAGCAAACATCAGATAAGAAAGAAC GGAGTATCCTCACTCCTGTATCAAAGCAAAGAGCAGGCGAGACCGACTCG GAAATCGACCCCAAGATATCCGGGTGTGAGGAGAGTTCGAGAACTTGCGA ATTAACAGAAACTCCATGTGAATCAGTCATGATGAGCAAAGACGACAAAG TTCGGccaccgcttcgaaataaggagtaa back to topprotein sequence of Ggra9176.t1 >Ggra9176.t1 ID=Ggra9176.t1|Name=Ggra9176.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=843bp
MLLASALSGNINDIPTLHPGSAIENSTMGLPRTIEVDGVTKGGQFLFKVD AHQLNALQGEEVRSIVSVTTCSDKYDLDTILLAYGENPLAADDPNELQPV EMNDNDCGLQSTIELLTVSLPVYVLLTGYGGAEGGFELQVNDMKRTPAGV TPWGLDRIDQRRLPLDGQFSVHRGGYGVFVYVLDSGIRTSHREFKNGKGT SRVIPGVDVVDRKHTFSDETGHGTHVAAIVAGTSFGVAKNATLISVRVID RNGRGYTSRLIEGLQWTLDDIQSNNHTPALVVMSLNTKYSASLNEAVEKA NEFGVVVITAAGNSGNDSCLFSPASSKSSISVGATRKDDSRADYSNVGRC LNIYAPGESITSAWHTSDEAERTLSGTSASCPHVAGTVAVLLAENPTMSP ADIQSVLFSTATFSVVGNHTTDKTLNTTSNEVSLTESNRLVYVRAIPSLP TDGDPKEGTMFIYVIYALATSRFLTDACDLSHAKSSSITELFKSHRIASS IDTTVNIKVCCTYASDRRNGCDVEELGNVTRMIVRLQTGDILAGAVFDFL HDFATSQEKTMMLETVLQTKVKLLAEPWVVDARGLKYWTAPTIMQPMQTR LPTSVIISISVAVSVFLFVGFLACAYMYYRRKKAREAAEQEAFRDMATKF ELSDGRHSNLADLEPGACIEYQKEGLKRTNTEINEGMFRHANPDLALPTP RQPLAFSPVGPQSVRSNRKQRSTLSSILGEWGQHSQSTTRERGIGSFSLR RLSFSSKKFPSFITKLTTPRNTKSQKQTSDKKERSILTPVSKQRAGETDS EIDPKISGCEESSRTCELTETPCESVMMSKDDKVRPPLRNKE* back to topmRNA from alignment at tig00000075_pilon:302746..305274+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra9176.t1 ID=Ggra9176.t1|Name=Ggra9176.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2529bp|location=Sequence derived from alignment at tig00000075_pilon:302746..305274+ (Gracilaria gracilis GNS1m male) ATGTTACTTGCCTCAGCTTTGTCCGGGAATATCAATGACATTCCAACTCT
GCACCCGGGCTCTGCAATTGAGAATTCTACTATGGGATTGCCGAGGACCA
TAGAAGTCGACGGCGTCACTAAAGGTGGTCAGTTTCTCTTCAAAGTTGAT
GCCCATCAATTAAATGCCCTTCAGGGTGAAGAAGTACGTAGCATTGTTTC
GGTCACTACTTGCTCGGACAAGTACGATTTGGATACTATTCTGTTAGCCT
ATGGAGAAAATCCGCTCGCCGCAGATGATCCAAATGAACTGCAACCAGTT
GAGATGAACGACAATGACTGTGGACTCCAGTCTACTATAGAGCTTTTGAC
TGTTTCTCTTCCAGTCTATGTTCTTCTAACTGGTTATGGGGGTGCAGAGG
GCGGGTTTGAACTACAAGTCAACGACATGAAGCGCACTCCAGCCGGAGTT
ACTCCCTGGGGTTTGGATCGAATTGATCAGAGGCGTCTCCCTTTGGATGG
ACAATTTTCTGTTCATAGAGGCGGATACGGCGTATTTGTATATGTATTGG
ACTCGGGAATACGAACGTCGCACAGAGAATTCAAAAATGGAAAAGGAACA
TCACGAGTCATCCCAGGAGTTGATGTGGTCGATCGGAAACATACATTTTC
GGATGAAACTGGTCATGGTACTCATGTTGCGGCAATTGTCGCTGGAACTT
CTTTTGGTGTCGCGAAGAACGCGACTCTAATATCGGTACGCGTCATTGAT
CGAAACGGGCGTGGATACACTAGTCGCCTTATTGAAGGACTTCAGTGGAC
CTTGGATGACATTCAAAGTAACAATCACACACCAGCTCTGGTCGTGATGT
CGTTAAATACGAAGTATTCAGCATCTTTGAATGAAGCTGTCGAAAAAGCG
AACGAATTTGGTGTGGTGGTCATCACAGCCGCTGGGAACTCAGGAAATGA
CAGTTGTTTGTTTTCACCAGCTTCGAGCAAGTCATCTATATCTGTTGGTG
CAACAAGAAAAGATGATAGTCGCGCAGACTATTCAAATGTCGGACGTTGT
CTCAACATATATGCACCAGGAGAGTCTATTACTTCTGCCTGGCATACGAG
TGATGAGGCAGAAAGGACACTATCAGGGACTTCTGCGTCCTGTCCTCATG
TAGCGGGAACGGTCGCAGTGCTGCTTGCAGAAAATCCCACAATGAGTCCA
GCCGATATACAATCAGTGCTTTTCTCCACAGCTACATTTTCAGTAGTTGG
GAATCACACCACAGATAAAACGCTCAACACTACGAGCAATGAAGTGAGTC
TCACTGAAAGTAACAGACTGGTATACGTCAGGGCTATTCCCTCTTTACCT
ACTGATGGAGACCCAAAGGAAGGAACAATGTTTATATACGTGATATATGC
CCTCGCCACATCAAGATTCTTGACAGATGCTTGCGATCTCTCTCATGCCA
AGAGTTCATCCATCACTGAACTCTTCAAGTCCCATAGAATTGCATCATCA
ATCGATACTACGGTGAACATCAAAGTATGTTGCACATATGCTTCCGACCG
TCGCAATGGCTGTGATGTCGAAGAGCTTGGGAATGTCACTCGAATGATTG
TTCGCCTGCAGACTGGTGATATTCTTGCCGGCGCTGTGTTTGACTTTCTT
CATGATTTCGCCACGTCTCAAGAAAAAACCATGATGCTGGAGACGGTACT
ACAGACGAAGGTGAAACTGTTGGCAGAACCATGGGTTGTTGACGCTAGAG
GCCTGAAGTACTGGACAGCTCCTACAATTATGCAGCCTATGCAAACCAGG
CTCCCGACATCAGTAATAATTTCAATCTCCGTGGCGGTTAGTGTGTTCTT
GTTTGTAGGGTTCTTGGCCTGCGCATACATGTACTACAGGAGGAAGAAAG
CTAGGGAAGCTGCTGAACAAGAAGCCTTCCGGGACATGGCGACGAAATTT
GAACTGTCCGACGGGCGACATAGCAATCTAGCTGATCTTGAACCTGGAGC
TTGTATCGAGTATCAGAAAGAAGGCTTAAAGCGAACAAACACAGAAATCA
ACGAAGGGATGTTCAGACATGCCAACCCAGATTTGGCATTGCCAACCCCA
CGGCAACCACTCGCCTTTTCACCTGTGGGACCTCAGAGTGTAAGGTCAAA
CCGAAAGCAGAGGAGCACGCTATCTAGCATCTTAGGGGAATGGGGCCAAC
ACAGTCAAAGCACTACCAGAGAAAGAGGCATAGGTTCTTTTTCATTACGA
CGTCTATCCTTTAGTTCGAAGAAGTTCCCGTCGTTTATAACGAAATTAAC
CACACCCCGAAATACGAAGTCACAGAAGCAAACATCAGATAAGAAAGAAC
GGAGTATCCTCACTCCTGTATCAAAGCAAAGAGCAGGCGAGACCGACTCG
GAAATCGACCCCAAGATATCCGGGTGTGAGGAGAGTTCGAGAACTTGCGA
ATTAACAGAAACTCCATGTGAATCAGTCATGATGAGCAAAGACGACAAAG
TTCGGccaccgcttcgaaataaggagtaa back to topCoding sequence (CDS) from alignment at tig00000075_pilon:302746..305274+ >Ggra9176.t1 ID=Ggra9176.t1|Name=Ggra9176.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2529bp|location=Sequence derived from alignment at tig00000075_pilon:302746..305274+ (Gracilaria gracilis GNS1m male) ATGTTACTTGCCTCAGCTTTGTCCGGGAATATCAATGACATTCCAACTCT GCACCCGGGCTCTGCAATTGAGAATTCTACTATGGGATTGCCGAGGACCA TAGAAGTCGACGGCGTCACTAAAGGTGGTCAGTTTCTCTTCAAAGTTGAT GCCCATCAATTAAATGCCCTTCAGGGTGAAGAAGTACGTAGCATTGTTTC GGTCACTACTTGCTCGGACAAGTACGATTTGGATACTATTCTGTTAGCCT ATGGAGAAAATCCGCTCGCCGCAGATGATCCAAATGAACTGCAACCAGTT GAGATGAACGACAATGACTGTGGACTCCAGTCTACTATAGAGCTTTTGAC TGTTTCTCTTCCAGTCTATGTTCTTCTAACTGGTTATGGGGGTGCAGAGG GCGGGTTTGAACTACAAGTCAACGACATGAAGCGCACTCCAGCCGGAGTT ACTCCCTGGGGTTTGGATCGAATTGATCAGAGGCGTCTCCCTTTGGATGG ACAATTTTCTGTTCATAGAGGCGGATACGGCGTATTTGTATATGTATTGG ACTCGGGAATACGAACGTCGCACAGAGAATTCAAAAATGGAAAAGGAACA TCACGAGTCATCCCAGGAGTTGATGTGGTCGATCGGAAACATACATTTTC GGATGAAACTGGTCATGGTACTCATGTTGCGGCAATTGTCGCTGGAACTT CTTTTGGTGTCGCGAAGAACGCGACTCTAATATCGGTACGCGTCATTGAT CGAAACGGGCGTGGATACACTAGTCGCCTTATTGAAGGACTTCAGTGGAC CTTGGATGACATTCAAAGTAACAATCACACACCAGCTCTGGTCGTGATGT CGTTAAATACGAAGTATTCAGCATCTTTGAATGAAGCTGTCGAAAAAGCG AACGAATTTGGTGTGGTGGTCATCACAGCCGCTGGGAACTCAGGAAATGA CAGTTGTTTGTTTTCACCAGCTTCGAGCAAGTCATCTATATCTGTTGGTG CAACAAGAAAAGATGATAGTCGCGCAGACTATTCAAATGTCGGACGTTGT CTCAACATATATGCACCAGGAGAGTCTATTACTTCTGCCTGGCATACGAG TGATGAGGCAGAAAGGACACTATCAGGGACTTCTGCGTCCTGTCCTCATG TAGCGGGAACGGTCGCAGTGCTGCTTGCAGAAAATCCCACAATGAGTCCA GCCGATATACAATCAGTGCTTTTCTCCACAGCTACATTTTCAGTAGTTGG GAATCACACCACAGATAAAACGCTCAACACTACGAGCAATGAAGTGAGTC TCACTGAAAGTAACAGACTGGTATACGTCAGGGCTATTCCCTCTTTACCT ACTGATGGAGACCCAAAGGAAGGAACAATGTTTATATACGTGATATATGC CCTCGCCACATCAAGATTCTTGACAGATGCTTGCGATCTCTCTCATGCCA AGAGTTCATCCATCACTGAACTCTTCAAGTCCCATAGAATTGCATCATCA ATCGATACTACGGTGAACATCAAAGTATGTTGCACATATGCTTCCGACCG TCGCAATGGCTGTGATGTCGAAGAGCTTGGGAATGTCACTCGAATGATTG TTCGCCTGCAGACTGGTGATATTCTTGCCGGCGCTGTGTTTGACTTTCTT CATGATTTCGCCACGTCTCAAGAAAAAACCATGATGCTGGAGACGGTACT ACAGACGAAGGTGAAACTGTTGGCAGAACCATGGGTTGTTGACGCTAGAG GCCTGAAGTACTGGACAGCTCCTACAATTATGCAGCCTATGCAAACCAGG CTCCCGACATCAGTAATAATTTCAATCTCCGTGGCGGTTAGTGTGTTCTT GTTTGTAGGGTTCTTGGCCTGCGCATACATGTACTACAGGAGGAAGAAAG CTAGGGAAGCTGCTGAACAAGAAGCCTTCCGGGACATGGCGACGAAATTT GAACTGTCCGACGGGCGACATAGCAATCTAGCTGATCTTGAACCTGGAGC TTGTATCGAGTATCAGAAAGAAGGCTTAAAGCGAACAAACACAGAAATCA ACGAAGGGATGTTCAGACATGCCAACCCAGATTTGGCATTGCCAACCCCA CGGCAACCACTCGCCTTTTCACCTGTGGGACCTCAGAGTGTAAGGTCAAA CCGAAAGCAGAGGAGCACGCTATCTAGCATCTTAGGGGAATGGGGCCAAC ACAGTCAAAGCACTACCAGAGAAAGAGGCATAGGTTCTTTTTCATTACGA CGTCTATCCTTTAGTTCGAAGAAGTTCCCGTCGTTTATAACGAAATTAAC CACACCCCGAAATACGAAGTCACAGAAGCAAACATCAGATAAGAAAGAAC GGAGTATCCTCACTCCTGTATCAAAGCAAAGAGCAGGCGAGACCGACTCG GAAATCGACCCCAAGATATCCGGGTGTGAGGAGAGTTCGAGAACTTGCGA ATTAACAGAAACTCCATGTGAATCAGTCATGATGAGCAAAGACGACAAAG TTCGGccaccgcttcgaaataaggagtaa back to top
|