Ggra9157.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9157.t1
Unique NameGgra9157.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length378
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:261175..262308 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9157Ggra9157Gracilaria gracilis GNS1m malegenetig00000075_pilon 261175..262308 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9157.t1.stop1Ggra9157.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000075_pilon 261175..261177 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9157.t1.CDS1Ggra9157.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000075_pilon 261175..262308 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9157.t1.exon1Ggra9157.t1.exon1Gracilaria gracilis GNS1m maleexontig00000075_pilon 261175..262308 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9157.t1.start1Ggra9157.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000075_pilon 262306..262308 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9157.t1Ggra9157.t1Gracilaria gracilis GNS1m malepolypeptidetig00000075_pilon 261175..262308 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9157.t1 ID=Ggra9157.t1|Name=Ggra9157.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=378bp
MQRENPQTIRRIHARRDQLRMPKAGHGLGAITRLRTATLLLAFTLVVLLI
GRSVFTKPVPCSSNPQQSHCAHPVECRDHAQVVETPHPLVVVSAGASRAS
STLLYNALRILLRMRDPNTVAGWYLDLLHLYDAYAQPMVRNGTLANKEKA
SRIDAFKALGSVLIKVHTVRDWHVFVGGGDVEPEMEGVVDAVFVTHRDVR
QAVRSIRDMGWGKRISEGERAHADFCRKNQPNARKGFLQREDFEQESTWV
NVARTQLRCREVMLRTSGSKLAMDLKSEHMVRASKGGLTALLRQLGSHLD
MHYTDAMLALAARELSLLRPVRCDSGYAVEMSVNPQTHLHKAHVHAASTP
SAAERRGFAAVAKDELCGAWLREHDYA*
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spliced messenger RNA

>Ggra9157.t1 ID=Ggra9157.t1|Name=Ggra9157.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1134bp|location=Sequence derived from alignment at tig00000075_pilon:261175..262308- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAACGGGAAAATCCTCAGACCATTCGCCGTATACATGCACGGCGCGA
CCAACTACGTATGCCAAAAGCCGGACACGGACTCGGAGCGATAACGCGCC
TCCGCACGGCAACACTGCTGTTGGCGTTCACACTGGTGGTTTTGCTCATT
GGCAGATCTGTGTTCACAAAGCCTGTTCCCTGCAGTAGCAATCCGCAACA
ATCGCATTGTGCACACCCTGTGGAGTGCAGAGATCACGCCCAGGTTGTGG
AAACCCCGCATCCGCTGGTGGTAGTATCAGCCGGAGCGTCGCGGGCGTCT
TCAACACTTCTATACAACGCGCTACGCATTCTGCTCAGAATGCGCGACCC
TAACACCGTGGCTGGATGGTACTTAGACTTGCTGCATCTGTACGACGCGT
ACGCACAGCCCATGGTGAGAAATGGCACGCTGGCGAACAAAGAGAAAGCA
AGCCGCATCGACGCGTTCAAAGCGTTAGGCAGCGTGCTGATCAAGGTGCA
CACAGTTCGTGATTGGCATGTGTTCGTCGGCGGCGGCGACGTGGAGCCCG
AAATGGAGGGCGTGGTGGACGCAGTGTTCGTAACGCATCGCGATGTGAGA
CAAGCCGTGCGCTCGATCCGCGACATGGGTTGGGGCAAGCGCATATCAGA
AGGCGAGCGAGCGCACGCGGACTTCTGCCGAAAGAACCAACCAAACGCTC
GAAAAGGATTTCTGCAGCGCGAGGACTTTGAGCAAGAAAGCACGTGGGTG
AACGTGGCTCGCACGCAGTTGAGATGCCGAGAAGTGATGCTGCGAACGTC
CGGGAGCAAACTGGCGATGGACCTCAAGTCAGAGCACATGGTACGCGCCA
GCAAAGGCGGGCTGACGGCGTTGCTAAGGCAGCTGGGCTCCCATCTGGAC
ATGCACTACACGGACGCCATGCTGGCGCTGGCCGCTCGCGAGCTGTCGCT
GCTCCGACCGGTGCGCTGCGACAGCGGCTACGCCGTGGAGATGAGCGTCA
ACCCGCAGACGCACCTGCACAAGGCGCACGTGCACGCAGCTAGTACGCCG
TCTGCCGCCGAAAGGCGCGGCTTCGCGGCCGTGGCCAAAGACGAGCTCTG
CGGGGCGTGGCTTCGTGAACACGACTACGCGTGA
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protein sequence of Ggra9157.t1

>Ggra9157.t1 ID=Ggra9157.t1|Name=Ggra9157.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=378bp
MQRENPQTIRRIHARRDQLRMPKAGHGLGAITRLRTATLLLAFTLVVLLI
GRSVFTKPVPCSSNPQQSHCAHPVECRDHAQVVETPHPLVVVSAGASRAS
STLLYNALRILLRMRDPNTVAGWYLDLLHLYDAYAQPMVRNGTLANKEKA
SRIDAFKALGSVLIKVHTVRDWHVFVGGGDVEPEMEGVVDAVFVTHRDVR
QAVRSIRDMGWGKRISEGERAHADFCRKNQPNARKGFLQREDFEQESTWV
NVARTQLRCREVMLRTSGSKLAMDLKSEHMVRASKGGLTALLRQLGSHLD
MHYTDAMLALAARELSLLRPVRCDSGYAVEMSVNPQTHLHKAHVHAASTP
SAAERRGFAAVAKDELCGAWLREHDYA*
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mRNA from alignment at tig00000075_pilon:261175..262308-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9157.t1 ID=Ggra9157.t1|Name=Ggra9157.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1134bp|location=Sequence derived from alignment at tig00000075_pilon:261175..262308- (Gracilaria gracilis GNS1m male)
ATGCAACGGGAAAATCCTCAGACCATTCGCCGTATACATGCACGGCGCGA
CCAACTACGTATGCCAAAAGCCGGACACGGACTCGGAGCGATAACGCGCC
TCCGCACGGCAACACTGCTGTTGGCGTTCACACTGGTGGTTTTGCTCATT
GGCAGATCTGTGTTCACAAAGCCTGTTCCCTGCAGTAGCAATCCGCAACA
ATCGCATTGTGCACACCCTGTGGAGTGCAGAGATCACGCCCAGGTTGTGG
AAACCCCGCATCCGCTGGTGGTAGTATCAGCCGGAGCGTCGCGGGCGTCT
TCAACACTTCTATACAACGCGCTACGCATTCTGCTCAGAATGCGCGACCC
TAACACCGTGGCTGGATGGTACTTAGACTTGCTGCATCTGTACGACGCGT
ACGCACAGCCCATGGTGAGAAATGGCACGCTGGCGAACAAAGAGAAAGCA
AGCCGCATCGACGCGTTCAAAGCGTTAGGCAGCGTGCTGATCAAGGTGCA
CACAGTTCGTGATTGGCATGTGTTCGTCGGCGGCGGCGACGTGGAGCCCG
AAATGGAGGGCGTGGTGGACGCAGTGTTCGTAACGCATCGCGATGTGAGA
CAAGCCGTGCGCTCGATCCGCGACATGGGTTGGGGCAAGCGCATATCAGA
AGGCGAGCGAGCGCACGCGGACTTCTGCCGAAAGAACCAACCAAACGCTC
GAAAAGGATTTCTGCAGCGCGAGGACTTTGAGCAAGAAAGCACGTGGGTG
AACGTGGCTCGCACGCAGTTGAGATGCCGAGAAGTGATGCTGCGAACGTC
CGGGAGCAAACTGGCGATGGACCTCAAGTCAGAGCACATGGTACGCGCCA
GCAAAGGCGGGCTGACGGCGTTGCTAAGGCAGCTGGGCTCCCATCTGGAC
ATGCACTACACGGACGCCATGCTGGCGCTGGCCGCTCGCGAGCTGTCGCT
GCTCCGACCGGTGCGCTGCGACAGCGGCTACGCCGTGGAGATGAGCGTCA
ACCCGCAGACGCACCTGCACAAGGCGCACGTGCACGCAGCTAGTACGCCG
TCTGCCGCCGAAAGGCGCGGCTTCGCGGCCGTGGCCAAAGACGAGCTCTG
CGGGGCGTGGCTTCGTGAACACGACTACGCGTGA
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Coding sequence (CDS) from alignment at tig00000075_pilon:261175..262308-

>Ggra9157.t1 ID=Ggra9157.t1|Name=Ggra9157.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1134bp|location=Sequence derived from alignment at tig00000075_pilon:261175..262308- (Gracilaria gracilis GNS1m male)
ATGCAACGGGAAAATCCTCAGACCATTCGCCGTATACATGCACGGCGCGA
CCAACTACGTATGCCAAAAGCCGGACACGGACTCGGAGCGATAACGCGCC
TCCGCACGGCAACACTGCTGTTGGCGTTCACACTGGTGGTTTTGCTCATT
GGCAGATCTGTGTTCACAAAGCCTGTTCCCTGCAGTAGCAATCCGCAACA
ATCGCATTGTGCACACCCTGTGGAGTGCAGAGATCACGCCCAGGTTGTGG
AAACCCCGCATCCGCTGGTGGTAGTATCAGCCGGAGCGTCGCGGGCGTCT
TCAACACTTCTATACAACGCGCTACGCATTCTGCTCAGAATGCGCGACCC
TAACACCGTGGCTGGATGGTACTTAGACTTGCTGCATCTGTACGACGCGT
ACGCACAGCCCATGGTGAGAAATGGCACGCTGGCGAACAAAGAGAAAGCA
AGCCGCATCGACGCGTTCAAAGCGTTAGGCAGCGTGCTGATCAAGGTGCA
CACAGTTCGTGATTGGCATGTGTTCGTCGGCGGCGGCGACGTGGAGCCCG
AAATGGAGGGCGTGGTGGACGCAGTGTTCGTAACGCATCGCGATGTGAGA
CAAGCCGTGCGCTCGATCCGCGACATGGGTTGGGGCAAGCGCATATCAGA
AGGCGAGCGAGCGCACGCGGACTTCTGCCGAAAGAACCAACCAAACGCTC
GAAAAGGATTTCTGCAGCGCGAGGACTTTGAGCAAGAAAGCACGTGGGTG
AACGTGGCTCGCACGCAGTTGAGATGCCGAGAAGTGATGCTGCGAACGTC
CGGGAGCAAACTGGCGATGGACCTCAAGTCAGAGCACATGGTACGCGCCA
GCAAAGGCGGGCTGACGGCGTTGCTAAGGCAGCTGGGCTCCCATCTGGAC
ATGCACTACACGGACGCCATGCTGGCGCTGGCCGCTCGCGAGCTGTCGCT
GCTCCGACCGGTGCGCTGCGACAGCGGCTACGCCGTGGAGATGAGCGTCA
ACCCGCAGACGCACCTGCACAAGGCGCACGTGCACGCAGCTAGTACGCCG
TCTGCCGCCGAAAGGCGCGGCTTCGCGGCCGTGGCCAAAGACGAGCTCTG
CGGGGCGTGGCTTCGTGAACACGACTACGCGTGA
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