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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 31033.ENSTRUP00000020588 |
| PFAMs | Trypsin |
| Max annot lvl | 33208|Metazoa |
| KEGG ko | ko:K08664,ko:K09628,ko:K09630 |
| Evalue | 2.5e-31 |
| EggNOG OGs | COG5640@1|root,KOG3627@2759|Eukaryota,39U11@33154|Opisthokonta,3BDTB@33208|Metazoa,3D0T5@33213|Bilateria,482CU@7711|Chordata,48ZVH@7742|Vertebrata,49QD9@7898|Actinopterygii |
| Description | Transmembrane protease serine 9-like |
| COG category | E |
| BRITE | ko00000,ko00537,ko01000,ko01002 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra9135.t1.start1 | Ggra9135.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000075_pilon 78822..78824 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra9135.t1 ID=Ggra9135.t1|Name=Ggra9135.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=594bp MGRQLAVFATVAMGALIRILVPRLPFSSKPRHPQNSDPPKVEEVTDDEDK EPGIESEIPKRLRNEDLDNFQDTNELGIRVLCDVIPFYYIWTNYIACPFT LDSENVRPQETHSQSSKRTTFISKQNANAEKSLLAQVLNQFVKEHPKDDD VLLGIGHTKVSYPPRNRAQGTLALFALRSTSWSRLSSTNSISFLRFRFSL VNQSVCTCFAFLVLIVIVNAGKPDLKGRPMAANLKVDKQTCDTILPTLSR QQQQSDRPDRIVNGEDAPAMRFYMAGLAARNGGIFCSATLLSEYWVLTAA HCPIALPDEIVRVGAANENEGTDIEIEEDSQFFLINTDPSYPASFSFTRT AGYGVSLGTSNPNGGVLRRVDVPIVGNKRCKRQYKDIFNIRKRMHICAGY DEGGCDSCQGDSGGPLFSFTKDRKLVQIGVVSFGFNCAEAQKPGVYARVS QYVDWMKSVGAEFTTTADGMNVVGADDLASEDATPTPSPSPAAVAVPTTT ATPSASPTPTPSAAAELSFFDQLINCFTRNVFVSTENGKQKSITELSAGE RVRFGKKGDSKLFEFEEEDNGTLKFMQIECEVCEALILPFCSA* back to topspliced messenger RNA >Ggra9135.t1 ID=Ggra9135.t1|Name=Ggra9135.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1782bp|location=Sequence derived from alignment at tig00000075_pilon:74776..78824- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGGACGTCAACTGGCCGTGTTTGCTACGGTGGCGATGGGCGCCTTGAT TCGAATCTTGGTCCCGCGTCTACCATTCTCCTCAAAGCCGCGTCATCCAC AAAACTCCGATCCCCCCAAGGTTGAGGAGGTGACGGATGATGAGGACAAG GAACCTGGGATCGAGAGTGAAATTCCAAAGCGCCTGCGAAATGAAGATTT GGACAACTTCCAGGACACCAACGAACTTGGAATCCGGGTTCTCTGTGATG TTATTCCTTTCTATTACATATGGACCAACTATATTGCGTGCCCTTTCACG CTGGACTCTGAAAACGTTCGGCCGCAAGAAACTCATTCACAATCGAGCAA ACGAACAACTTTCATTAGTAAGCAGAATGCCAATGCCGAGAAGTCGCTTC TGGCTCAAGTACTTAATCAATTCGTGAAAGAGCACCCGAAAGATGATGAT GTGTTGCTGGGTATCGGGCATACGAAGGTGAGCTATCCACCTCGTAACCG CGCGCAGGGAACTCTCGCTTTGTTTGCACTTCGAAGCACTAGTTGGAGTC GTCTATCCTCCACCAATTCCATATCATTTCTGCGTTTCAGGTTTTCTTTG GTCAACCAAAGCGTATGCACTTGTTTTGCGTTTCTGGTTCTCATCGTCAT CGTCAATGCTGGAAAACCAGACCTAAAAGGCAGGCCGATGGCCGCTAATT TGAAGGTTGATAAGCAGACATGTGACACAATTCTCCCGACTCTTTCCCGC CAGCAACAGCAATCAGACCGACCCGACCGAATCGTTAACGGAGAGGATGC GCCGGCCATGAGGTTTTATATGGCTGGCTTGGCAGCGCGCAACGGAGGAA TTTTTTGTTCAGCTACCTTGCTCTCTGAGTACTGGGTCTTAACGGCTGCA CATTGTCCGATTGCGCTTCCGGATGAAATAGTCCGAGTGGGAGCCGCCAA CGAGAATGAAGGAACAGATATCGAAATCGAAGAAGATTCCCAGTTCTTCT TGATCAACACCGATCCTTCGTACCCTGCTTCTTTCTCTTTCACTCGTACT GCCGGGTATGGTGTTTCTCTGGGCACTTCCAATCCCAACGGAGGTGTTTT GCGCCGAGTTGACGTCCCGATTGTGGGAAACAAACGTTGTAAAAGGCAAT ACAAGGACATCTTCAACATTCGGAAGAGAATGCACATATGTGCCGGGTAT GATGAGGGTGGATGCGACTCCTGCCAGGGTGACAGCGGTGGCCCGTTGTT TTCGTTCACAAAAGATCGCAAGCTAGTACAGATAGGAGTTGTTTCTTTTG GTTTCAATTGTGCTGAAGCTCAGAAACCTGGCGTTTACGCACGGGTTTCG CAGTACGTGGATTGGATGAAATCGGTTGGCGCTGAGTTCACGACGACGGC GGATGGAATGAATGTTGTTGGCGCTGACGATTTAGCTTCTGAGGACGCTA CCCCTACTCCCTCTCCCTCCCCTGCGGCTGTTGCGGTGCCAACTACAACT GCCACTCCAAGTGCGTCCCCTACGCCAACTCCGTCTGCTGCGGCCGAATT GTCGTTCTTTGATCAACTGATTAACTGCTTCACACGAAATGTGTTCGTGA GCACTGAAAACGGCAAGCAGAAGAGTATTACGGAGCTATCGGCTGGAGAG CGAGTGAGATTTGGAAAGAAAGGAGACTCGAAACTTTTCGAATTTGAGGA GGAAGACAATGGAACACTTAAGTTTATGCAGATCGAATGCGAAGTGTGTG AGGCTCTGATACTGCCCTTCTGCAGTGCTTAG back to topprotein sequence of Ggra9135.t1 >Ggra9135.t1 ID=Ggra9135.t1|Name=Ggra9135.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=594bp
MGRQLAVFATVAMGALIRILVPRLPFSSKPRHPQNSDPPKVEEVTDDEDK EPGIESEIPKRLRNEDLDNFQDTNELGIRVLCDVIPFYYIWTNYIACPFT LDSENVRPQETHSQSSKRTTFISKQNANAEKSLLAQVLNQFVKEHPKDDD VLLGIGHTKVSYPPRNRAQGTLALFALRSTSWSRLSSTNSISFLRFRFSL VNQSVCTCFAFLVLIVIVNAGKPDLKGRPMAANLKVDKQTCDTILPTLSR QQQQSDRPDRIVNGEDAPAMRFYMAGLAARNGGIFCSATLLSEYWVLTAA HCPIALPDEIVRVGAANENEGTDIEIEEDSQFFLINTDPSYPASFSFTRT AGYGVSLGTSNPNGGVLRRVDVPIVGNKRCKRQYKDIFNIRKRMHICAGY DEGGCDSCQGDSGGPLFSFTKDRKLVQIGVVSFGFNCAEAQKPGVYARVS QYVDWMKSVGAEFTTTADGMNVVGADDLASEDATPTPSPSPAAVAVPTTT ATPSASPTPTPSAAAELSFFDQLINCFTRNVFVSTENGKQKSITELSAGE RVRFGKKGDSKLFEFEEEDNGTLKFMQIECEVCEALILPFCSA* back to topmRNA from alignment at tig00000075_pilon:74776..78824- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra9135.t1 ID=Ggra9135.t1|Name=Ggra9135.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=4049bp|location=Sequence derived from alignment at tig00000075_pilon:74776..78824- (Gracilaria gracilis GNS1m male) ATGGGACGTCAACTGGCCGTGTTTGCTACGGTGGCGATGGGCGCCTTGAT
TCGAATCTTGGTCCCGCGTCTACCATTCTCCTCAAAGCCGCGTCATCCAC
AAAACTCCGATCCCCCCAAGGTTGAGGAGGTGACGGATGATGAGGACAGT
ACGTCAACGTCTTCACAGCGTCCATCGGCGTCGCGCCGCGCGGTCAGAGC
AAGCAGGCCGGTCCTTTGTTCAGCAGATGTGTTGGCGGGGCTCGATTCCA
TCGCACCTCACGCTCATCGCTGTCCACAGTCTGTAACTTGCGTATGTTGC
CACCAGACCATCACAGCGAAACAATTTCCAAGGATCACGCCCTGTCATCA
CCACTTCCATTCGCATTGCTTGCAAAAGCTGGCGTTGGAGGCTACCAACA
AGTTGATGAATTCTGACATGTACTCTGTAGCTCGTGACGGAACGGTACGT
TTTGAGGGTCAATTTCTAAGTTGCCCTGAGTGCCGTGAAGTTTTGGACGT
GGTGCCACGGCGGGTGTGGATTTGGTATCTGCTCTCAGCCGTGGCACAGT
CGCTACAGGTCGAGGGCCGTATCGCTACACACATGTATCGCAACGGTATG
GTCATTCGGGACAACGCTTTGCGTGGTCTGCATGTGAGGATTCCAAACGA
TCAAGTAGGAACCTTGTGCAGCTCGATTGATTTGGTGGGCGAGCACGAAA
GAGACAGGGTCCGGGCAACTGGACTGACCCCTGTTTTCTGTTTTCCCGCA
CGCACTCGATCGGAACAGCGCGGCTTTGGGAGGGCCGACACGTACTTGGC
TGCATCCGAAGGGGTAAACTCCACATGGTGTGGGGATACTGAATAAGGTT
TTCAATAGGTAAAGGCAAAATGTAGTAGCCACTCACTAAAATCTGTTTGC
TGGGTACTCAACAACTTGAGCGACCCTTCAAATAGCTTTCGGTGGGTGGC
TATTGCATATTCCGACAAGCAACTATTGCTAGAATAACCGAAGCCTACAC
AACTGAATATAAGCTCAACATCATTGACCTCAAGGGCTGATCGGCGCGTA
ATGGATCTCATAATCTGCCTTTCGGGTTATCGTCTTGCATAACCCGCGTT
TGAATACAATGAACTTGTAAATACTAATGAGATTAAGAGAGTCCGTCTCC
ACTTGATATAGAGCGTAGAAACATCTTCGTTGGCCACTTTACACCATACC
ATTCCGTCAGTGTCAGTTTCCCGCGGACGTGGGGGGTACCAACGAGGTAC
AGCCTGTCCCGCTCTGAAGATCTCCGCACCGGATGGCTCCCCAACTCTAC
TTCACAGGATTGAAGTAGGCTGTCATGGTTGTAGAGAACCCTCACCAACG
CACCGCTTTAGGGCTCGCCGCGTACTGGTTCATGGGACTGCAGCACTACA
TGTGGGCCACCACTGCGATACCACGTAAGTAGAATGACACTAATAGCATT
GTATGCTTTACCTGGCCAGATCTAATAAATGGAACGAAGGTACCGTTGGT
ACCCAACAACAGCATGTTGTCCCATGCAACACGCTCAAAACCGGCATGTA
GTCGGCAGCAAACAAATGCAAAATGGCGTGATGCCTCTAGCCCCGGAAGA
AACCCGAAATGAAATGTAACTCACACCCCGAAGGAGGCTGCGATGTGGCT
CATAGGTCGAGAGGACTAACGCTGTGAGAACGTTGCATAACATCATGATG
CGCGCACGTCAGCCGAGGGTTGGCATGGTATGCAGATAGCACGGGGTTGT
TGTTTTGAGGGCCAACGGATGAGAGGGCAAACCTTTAGACATATTGAACC
CCTGTTTTTCCACGACCGAGAGAGGATTTTTGCCCTGCAATACTCGGTGT
TGTATGGAGAAGTCTTCTTTACAACGTGTATGATTCAACAGCTATTGTAC
TTTGAGGCCTGTGTTGGCCGGTAAAAGGGCTAATGGTTATAAACCGTTGC
CTTTAAACTGAAGGGCATGCTGGTTTCATAGGAAGGTATTGGAGTCGAAG
TTTTCAAAAATGTCAACCGATTGTTGATTCATTGTCCTTCTTTGTGTTAT
GCTTTCCAAACCCCATCTTTCCTCAACAAAGTATGACACTGTCTCAAACT
ATGTCGCCTGCCGAAGAGGAACCTGGGATCGAGAGTGAAATTCCAAAGCG
CCTGCGAAATGAAGATTTGGACAACTTCCAGGACACCAACGAACTTGGAA
TCCGTATGATATACCTTTTTCAGCTGTAGGCCAAAATATAGAGTACCGAG
TGGTTCCTTTTTCAATCCCGTTTAACCTCGGCCCCATCTTATCTGATAGT
CTGATAGGTTTATGTGTCCGCCCTCGAAAGAAGAGCCTATTGAGGGGTTC
TCTGTGATGTTATTCCTTTCTATTACATATGGACCAACTATATTGCGTGC
CCTTTCACGCTGGACTCTGAAAACGTTCGGCCGCAAGAAACTCATTCACA
ATCGAGCAAACGAACAACTTTCATTAGTAAGCAGAATGCCAATGCCGAGA
AGTCGCTTCTGGCTCAAGTACTTAATCAATTCGTGAAAGAGCACCCGAAA
GATGATGATGTGTTGCTGGGTATCGGGCATACGAAGGTGAGCTATCCACC
TCGTAACCGCGCGCAGGGAACTCTCGCTTTGTTTGCACTTCGAAGCACTA
GTTGGAGTCGTCTATCCTCCACCAATTCCATATCATTTCTGCGTTTCAGG
TTTGTCCGTTTGTGATCGCTCGTACTAATCTCCAAAACCAATTTCCGCAC
AATGTCCTTCGCCTTCAAACAGTCTTTGGTCAACCAAAGCGTATGCACTT
GTTTTGCGTTTCTGGTTCTCATCGTCATCGTCAATGCTGGAAAACCAGAC
CTAAAAGGCAGGCCGATGGCCGCTAATTTGAAGGTTGATAAGCAGACATG
TGACACAATTCTCCCGACTCTTTCCCGCCAGCAACAGCAATCAGACCGAC
CCGACCGAATCGTTAACGGAGAGGATGCGCCGGCCATGAGGTTTTATATG
GCTGGCTTGGCAGCGCGCAACGGAGGAATTTTTTGTTCAGCTACCTTGCT
CTCTGAGTACTGGGTCTTAACGGCTGCACATTGTCCGATTGCGCTTCCGG
ATGAAATAGTCCGAGTGGGAGCCGCCAACGAGAATGAAGGAACAGATATC
GAAATCGAAGAAGTATTCGTTCATCCCAATTACAAGGAGGATGGATTGGG
AACGTTAAAGAACGACGTGCAGTTGGTTAAGTTGAAAGCGCCGTCCCGAA
GGATTCCCAGTTCTTCTTGATCAACACCGATCCTTCGTACCCTGCTTCTT
TCTCTTTCACTCGTACTGCCGGGTATGGTGTTTCTCTGGGCACTTCCAAT
CCCAACGGAGGTGTTTTGCGCCGAGTTGACGTCCCGATTGTGGGAAACAA
ACGTTGTAAAAGGCAATACAAGGACATCTTCAACATTCGGAAGAGAATGC
ACATATGTGCCGGGTATGATGAGGGTGGATGCGACTCCTGCCAGGGTGAC
AGCGGTGGCCCGTTGTTTTCGTTCACAAAAGATCGCAAGCTAGTACAGAT
AGGAGTTGTTTCTTTTGGTTTCAATTGTGCTGAAGCTCAGAAACCTGGCG
TTTACGCACGGGTTTCGCAGTACGTGGATTGGATGAAATCGGTTGGCGCT
GAGTTCACGACGACGGCGGATGGAATGAATGTTGTTGGCGCTGACGATTT
AGCTTCTGAGGACGCTACCCCTACTCCCTCTCCCTCCCCTGCGGCTGTTG
CGGTGCCAACTACAACTGCCACTCCAAGTGCGTCCCCTACGCCAACTCCG
TCTGCTGCGGCCGAATTGTCGTTCTTTGATCAACTGATTAACTGCTTCAC
ACGAAATGTGTTCGTGAGCACTGAAAACGGCAAGCAGAAGAGTATTACGG
AGCTATCGGCTGGAGAGCGAGTGAGATTTGGAAAGAAAGGAGACTCGAAA
CTTTTCGAATTTGAGGAGGAAGACAATGGAACACTTAAGTTTATGCAGAT
CGAATGCGAAGTGTGTGAGGCTCTGATACTGCCCTTCTGCAGTGCTTAG back to topCoding sequence (CDS) from alignment at tig00000075_pilon:74776..78824- >Ggra9135.t1 ID=Ggra9135.t1|Name=Ggra9135.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1782bp|location=Sequence derived from alignment at tig00000075_pilon:74776..78824- (Gracilaria gracilis GNS1m male) ATGGGACGTCAACTGGCCGTGTTTGCTACGGTGGCGATGGGCGCCTTGAT TCGAATCTTGGTCCCGCGTCTACCATTCTCCTCAAAGCCGCGTCATCCAC AAAACTCCGATCCCCCCAAGGTTGAGGAGGTGACGGATGATGAGGACAAG GAACCTGGGATCGAGAGTGAAATTCCAAAGCGCCTGCGAAATGAAGATTT GGACAACTTCCAGGACACCAACGAACTTGGAATCCGGGTTCTCTGTGATG TTATTCCTTTCTATTACATATGGACCAACTATATTGCGTGCCCTTTCACG CTGGACTCTGAAAACGTTCGGCCGCAAGAAACTCATTCACAATCGAGCAA ACGAACAACTTTCATTAGTAAGCAGAATGCCAATGCCGAGAAGTCGCTTC TGGCTCAAGTACTTAATCAATTCGTGAAAGAGCACCCGAAAGATGATGAT GTGTTGCTGGGTATCGGGCATACGAAGGTGAGCTATCCACCTCGTAACCG CGCGCAGGGAACTCTCGCTTTGTTTGCACTTCGAAGCACTAGTTGGAGTC GTCTATCCTCCACCAATTCCATATCATTTCTGCGTTTCAGGTTTTCTTTG GTCAACCAAAGCGTATGCACTTGTTTTGCGTTTCTGGTTCTCATCGTCAT CGTCAATGCTGGAAAACCAGACCTAAAAGGCAGGCCGATGGCCGCTAATT TGAAGGTTGATAAGCAGACATGTGACACAATTCTCCCGACTCTTTCCCGC CAGCAACAGCAATCAGACCGACCCGACCGAATCGTTAACGGAGAGGATGC GCCGGCCATGAGGTTTTATATGGCTGGCTTGGCAGCGCGCAACGGAGGAA TTTTTTGTTCAGCTACCTTGCTCTCTGAGTACTGGGTCTTAACGGCTGCA CATTGTCCGATTGCGCTTCCGGATGAAATAGTCCGAGTGGGAGCCGCCAA CGAGAATGAAGGAACAGATATCGAAATCGAAGAAGATTCCCAGTTCTTCT TGATCAACACCGATCCTTCGTACCCTGCTTCTTTCTCTTTCACTCGTACT GCCGGGTATGGTGTTTCTCTGGGCACTTCCAATCCCAACGGAGGTGTTTT GCGCCGAGTTGACGTCCCGATTGTGGGAAACAAACGTTGTAAAAGGCAAT ACAAGGACATCTTCAACATTCGGAAGAGAATGCACATATGTGCCGGGTAT GATGAGGGTGGATGCGACTCCTGCCAGGGTGACAGCGGTGGCCCGTTGTT TTCGTTCACAAAAGATCGCAAGCTAGTACAGATAGGAGTTGTTTCTTTTG GTTTCAATTGTGCTGAAGCTCAGAAACCTGGCGTTTACGCACGGGTTTCG CAGTACGTGGATTGGATGAAATCGGTTGGCGCTGAGTTCACGACGACGGC GGATGGAATGAATGTTGTTGGCGCTGACGATTTAGCTTCTGAGGACGCTA CCCCTACTCCCTCTCCCTCCCCTGCGGCTGTTGCGGTGCCAACTACAACT GCCACTCCAAGTGCGTCCCCTACGCCAACTCCGTCTGCTGCGGCCGAATT GTCGTTCTTTGATCAACTGATTAACTGCTTCACACGAAATGTGTTCGTGA GCACTGAAAACGGCAAGCAGAAGAGTATTACGGAGCTATCGGCTGGAGAG CGAGTGAGATTTGGAAAGAAAGGAGACTCGAAACTTTTCGAATTTGAGGA GGAAGACAATGGAACACTTAAGTTTATGCAGATCGAATGCGAAGTGTGTG AGGCTCTGATACTGCCCTTCTGCAGTGCTTAG back to top
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