Ggra9118.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9118.t1
Unique NameGgra9118.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length138
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:30695..31108 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9118Ggra9118Gracilaria gracilis GNS1m malegenetig00000075_pilon 30695..31108 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9118.t1.stop1Ggra9118.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000075_pilon 30695..30697 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9118.t1.CDS1Ggra9118.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000075_pilon 30695..31108 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9118.t1.exon1Ggra9118.t1.exon1Gracilaria gracilis GNS1m maleexontig00000075_pilon 30695..31108 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9118.t1.start1Ggra9118.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000075_pilon 31106..31108 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9118.t1Ggra9118.t1Gracilaria gracilis GNS1m malepolypeptidetig00000075_pilon 30695..31108 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9118.t1 ID=Ggra9118.t1|Name=Ggra9118.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=138bp
MKPVAVHEANYVNATGYWLAFHEAVVRLLQDAIKADSKENADRYDVWGLL
AVRYGLRTLGLRTEFYKLAADDPVTAKMIIPRLERQLDMPAANNMVHAMD
TLDSHMMTQLMNAVATLKTSNAKNKAGGNRGSAADGT*
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spliced messenger RNA

>Ggra9118.t1 ID=Ggra9118.t1|Name=Ggra9118.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=414bp|location=Sequence derived from alignment at tig00000075_pilon:30695..31108- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAACCAGTTGCAGTCCATGAAGCTAATTATGTAAACGCCACTGGGTA
TTGGCTTGCCTTTCACGAGGCAGTAGTACGGCTACTTCAGGATGCTATCA
AAGCCGACAGCAAGGAGAACGCCGATCGCTACGATGTATGGGGTCTTTTG
GCTGTTCGCTATGGCCTAAGAACGTTAGGGCTCCGAACGGAGTTCTACAA
ATTAGCTGCTGATGACCCGGTTACCGCGAAGATGATAATACCAAGATTAG
AACGCCAACTAGACATGCCCGCCGCCAATAACATGGTGCACGCAATGGAC
ACGTTAGATTCCCACATGATGACGCAACTAATGAACGCAGTTGCTACTCT
GAAAACCAGCAACGCAAAGAACAAAGCTGGAGGAAACAGAGGTAGCGCTG
CCGACGGCACGTAA
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protein sequence of Ggra9118.t1

>Ggra9118.t1 ID=Ggra9118.t1|Name=Ggra9118.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=138bp
MKPVAVHEANYVNATGYWLAFHEAVVRLLQDAIKADSKENADRYDVWGLL
AVRYGLRTLGLRTEFYKLAADDPVTAKMIIPRLERQLDMPAANNMVHAMD
TLDSHMMTQLMNAVATLKTSNAKNKAGGNRGSAADGT*
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mRNA from alignment at tig00000075_pilon:30695..31108-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9118.t1 ID=Ggra9118.t1|Name=Ggra9118.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=414bp|location=Sequence derived from alignment at tig00000075_pilon:30695..31108- (Gracilaria gracilis GNS1m male)
ATGAAACCAGTTGCAGTCCATGAAGCTAATTATGTAAACGCCACTGGGTA
TTGGCTTGCCTTTCACGAGGCAGTAGTACGGCTACTTCAGGATGCTATCA
AAGCCGACAGCAAGGAGAACGCCGATCGCTACGATGTATGGGGTCTTTTG
GCTGTTCGCTATGGCCTAAGAACGTTAGGGCTCCGAACGGAGTTCTACAA
ATTAGCTGCTGATGACCCGGTTACCGCGAAGATGATAATACCAAGATTAG
AACGCCAACTAGACATGCCCGCCGCCAATAACATGGTGCACGCAATGGAC
ACGTTAGATTCCCACATGATGACGCAACTAATGAACGCAGTTGCTACTCT
GAAAACCAGCAACGCAAAGAACAAAGCTGGAGGAAACAGAGGTAGCGCTG
CCGACGGCACGTAA
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Coding sequence (CDS) from alignment at tig00000075_pilon:30695..31108-

>Ggra9118.t1 ID=Ggra9118.t1|Name=Ggra9118.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=414bp|location=Sequence derived from alignment at tig00000075_pilon:30695..31108- (Gracilaria gracilis GNS1m male)
ATGAAACCAGTTGCAGTCCATGAAGCTAATTATGTAAACGCCACTGGGTA
TTGGCTTGCCTTTCACGAGGCAGTAGTACGGCTACTTCAGGATGCTATCA
AAGCCGACAGCAAGGAGAACGCCGATCGCTACGATGTATGGGGTCTTTTG
GCTGTTCGCTATGGCCTAAGAACGTTAGGGCTCCGAACGGAGTTCTACAA
ATTAGCTGCTGATGACCCGGTTACCGCGAAGATGATAATACCAAGATTAG
AACGCCAACTAGACATGCCCGCCGCCAATAACATGGTGCACGCAATGGAC
ACGTTAGATTCCCACATGATGACGCAACTAATGAACGCAGTTGCTACTCT
GAAAACCAGCAACGCAAAGAACAAAGCTGGAGGAAACAGAGGTAGCGCTG
CCGACGGCACGTAA
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