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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005705938.1 |
| PFAMs | tRNA-synt_1c,tRNA-synt_1c_C,tRNA_synt_1c_R1 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00055,RC00523 |
| KEGG ko | ko:K01886 |
| KEGG Reaction | R03652 |
| KEGG Pathway | ko00970,ko01100,map00970,map01100 |
| KEGG Module | M00359,M00360 |
| GOs | GO:0003674,GO:0003824,GO:0004812,GO:0004819,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006425,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 |
| Evalue | 4.25e-244 |
| EggNOG OGs | COG0008@1|root,KOG1148@2759|Eukaryota |
| EC | 6.1.1.18 |
| Description | glutaminyl-tRNA aminoacylation |
| COG category | J |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra9096.t1.stop1 | Ggra9096.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000176_pilon 178399..178401 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra9096.t1.start1 | Ggra9096.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000176_pilon 180748..180750 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra9096.t1 ID=Ggra9096.t1|Name=Ggra9096.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=784bp MPSNSVKELTPDAQERVSTLEEYGLESRLAHTVGKSEKTTNTLLDAFTCA SLSPKPQHGALKAALLYTATTKLNSLVGKNGRTLLYSAVGDGKLDDSPHV EAAAAWLNSVYKKAGGSVPDTKVKLDDITIDEKEFEHAAGVGVVVSEADI EAAVSEAIELNKPELLEKRYRFNSGLMQRKVMEKLRFADGKVINSLIRSR IQNLLGPKTEADLAKPPKVKKQKTKKAPAAKKVEEGTEEVADPFEGVPNR FEARGLSSAENTPELLEKHRKATGGKVVTRFPPEPNGYLHVGHAKAMFID FGYAKKMAGECVLRFDDTNPTVEKTEYIDAIIEMVKWMGHEPVRITYSSD YFGELYDLAVELIKRGKAYVCHQTGDEISKGRKDGADSPWRDRTVEENIR LFDDMRKGKYGEGEATLRMKIDMKHPNLVMRDPVAYRVIHAPHPHVGDKW CVYPSYDYTHCIVDSLEWITHSLCTLEFEIRRDSYYWLLEALDLYRPFVW ESSRLNLEYTVMSKRKLKQLVEQGYVRGWDDPRMPTLVGMSRRGYSPNSL NRFCNAIGVSRANNVIGMHVLEHWVRTEHDSNSKRVLAVLRPLKITISNF KENEVLSVSNHPKKEGMGKREVLLTKTVYIERTDFRMVDEKGYYGLAPGK SAMLRYAYPIKVMDVIKEGEEVVELVAEMDYSKSTKPKGVLHWVGENAIS FEARLYSTLFKSPDPSVLKDDWLNDLNEEGEVVLKNCLIEESVKDSKAGE TFQFERKGYFTVDSDSSTDKMVFNMTVSLRDSR* back to topspliced messenger RNA >Ggra9096.t1 ID=Ggra9096.t1|Name=Ggra9096.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2352bp|location=Sequence derived from alignment at tig00000176_pilon:178399..180750- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCCTTCAAACTCTGTGAAAGAACTCACGCCGGATGCCCAGGAGCGAGT TTCAACTCTGGAAGAGTACGGCTTGGAATCACGCCTGGCTCACACCGTTG GAAAAAGTGAGAAAACTACAAACACGCTCCTTGATGCGTTTACTTGCGCC TCACTGAGTCCAAAACCACAACATGGAGCGCTCAAAGCGGCCTTGTTATA CACCGCAACAACAAAGCTGAACTCCCTCGTTGGCAAGAACGGACGCACTC TTCTTTATAGCGCAGTTGGAGATGGGAAGCTAGATGATTCGCCTCATGTG GAAGCCGCCGCTGCGTGGTTGAACAGCGTATACAAGAAAGCCGGTGGCTC TGTTCCGGATACGAAAGTGAAACTAGACGATATCACAATTGACGAAAAGG AATTTGAGCATGCTGCCGGCGTTGGGGTAGTAGTTTCTGAAGCCGACATT GAGGCTGCTGTTAGCGAAGCAATCGAATTGAACAAGCCCGAGCTTTTGGA AAAGCGATATCGCTTCAACTCAGGTTTGATGCAGAGAAAAGTGATGGAAA AGCTTCGGTTTGCGGACGGAAAGGTTATCAATAGCCTCATTCGTTCCCGC ATACAAAATTTACTTGGTCCTAAAACTGAAGCAGATCTTGCCAAACCGCC AAAGGTCAAGAAACAGAAAACAAAGAAGGCACCTGCTGCAAAGAAAGTAG AGGAGGGAACAGAAGAGGTTGCAGATCCATTTGAGGGTGTACCAAATAGA TTTGAGGCACGAGGGCTTTCAAGCGCTGAGAACACACCTGAGCTCCTCGA GAAGCATCGCAAGGCGACTGGGGGCAAGGTGGTGACAAGGTTCCCCCCAG AGCCAAACGGATACTTGCATGTTGGTCATGCAAAAGCAATGTTCATCGAT TTTGGGTACGCGAAGAAAATGGCAGGAGAATGTGTGCTGCGCTTTGATGA CACCAATCCAACGGTGGAGAAGACCGAGTACATTGATGCAATCATAGAAA TGGTGAAGTGGATGGGACACGAGCCAGTCCGCATCACATACAGCTCAGAC TATTTTGGAGAATTGTATGATCTTGCTGTCGAGCTTATCAAGAGAGGCAA AGCTTATGTGTGCCATCAGACAGGTGACGAAATCTCAAAGGGGCGAAAAG ATGGTGCAGACTCGCCCTGGCGAGACAGGACTGTGGAGGAAAACATTCGT CTTTTCGACGATATGCGGAAAGGAAAGTACGGTGAAGGCGAAGCAACTCT TCGTATGAAGATTGACATGAAGCATCCGAACTTGGTCATGCGTGATCCCG TTGCGTACCGCGTTATTCACGCGCCACACCCCCATGTGGGAGACAAATGG TGCGTGTATCCATCCTATGATTACACGCATTGCATCGTTGACTCTCTGGA ATGGATTACACATTCTCTATGCACTTTGGAGTTTGAGATTAGACGTGATT CTTATTACTGGCTGTTAGAAGCGCTTGACCTTTACCGGCCATTTGTCTGG GAGTCTTCTAGACTTAACCTGGAATACACGGTGATGTCAAAGAGAAAGCT GAAGCAGCTGGTAGAACAGGGATACGTCCGCGGATGGGATGATCCTCGAA TGCCAACCTTAGTTGGAATGAGTCGTCGCGGTTATTCTCCGAACTCGCTC AACCGCTTCTGCAACGCCATCGGCGTTTCTCGGGCGAATAATGTGATCGG CATGCACGTTTTAGAACATTGGGTACGAACTGAACATGATTCCAATTCCA AGAGAGTGTTGGCCGTGTTAAGGCCGTTGAAGATAACTATCAGCAACTTT AAGGAAAACGAAGTACTTAGCGTCTCTAATCACCCGAAGAAAGAGGGAAT GGGCAAGCGCGAAGTTTTGCTGACTAAGACTGTTTACATTGAGCGGACTG ATTTCAGAATGGTTGATGAGAAAGGGTATTATGGCCTTGCACCTGGAAAG AGTGCAATGTTGCGCTACGCGTATCCAATCAAGGTCATGGATGTGATTAA AGAAGGCGAAGAGGTTGTGGAACTGGTGGCCGAAATGGACTACAGTAAGT CTACGAAGCCAAAGGGCGTTCTTCATTGGGTCGGGGAGAATGCAATCTCC TTCGAGGCTCGTCTGTATAGTACCCTTTTCAAGAGTCCAGACCCTTCAGT TCTAAAGGACGATTGGCTAAACGATTTGAACGAGGAAGGTGAAGTTGTTT TGAAGAACTGTTTGATAGAAGAAAGCGTTAAGGATTCAAAGGCGGGGGAA ACATTCCAGTTTGAACGAAAAGGATACTTCACAGTTGATTCAGATAGCTC TACTGATAAGATGGTATTCAATATGACAGTTTCACTACGGGACTCGCGTT AA back to topprotein sequence of Ggra9096.t1 >Ggra9096.t1 ID=Ggra9096.t1|Name=Ggra9096.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=784bp
MPSNSVKELTPDAQERVSTLEEYGLESRLAHTVGKSEKTTNTLLDAFTCA SLSPKPQHGALKAALLYTATTKLNSLVGKNGRTLLYSAVGDGKLDDSPHV EAAAAWLNSVYKKAGGSVPDTKVKLDDITIDEKEFEHAAGVGVVVSEADI EAAVSEAIELNKPELLEKRYRFNSGLMQRKVMEKLRFADGKVINSLIRSR IQNLLGPKTEADLAKPPKVKKQKTKKAPAAKKVEEGTEEVADPFEGVPNR FEARGLSSAENTPELLEKHRKATGGKVVTRFPPEPNGYLHVGHAKAMFID FGYAKKMAGECVLRFDDTNPTVEKTEYIDAIIEMVKWMGHEPVRITYSSD YFGELYDLAVELIKRGKAYVCHQTGDEISKGRKDGADSPWRDRTVEENIR LFDDMRKGKYGEGEATLRMKIDMKHPNLVMRDPVAYRVIHAPHPHVGDKW CVYPSYDYTHCIVDSLEWITHSLCTLEFEIRRDSYYWLLEALDLYRPFVW ESSRLNLEYTVMSKRKLKQLVEQGYVRGWDDPRMPTLVGMSRRGYSPNSL NRFCNAIGVSRANNVIGMHVLEHWVRTEHDSNSKRVLAVLRPLKITISNF KENEVLSVSNHPKKEGMGKREVLLTKTVYIERTDFRMVDEKGYYGLAPGK SAMLRYAYPIKVMDVIKEGEEVVELVAEMDYSKSTKPKGVLHWVGENAIS FEARLYSTLFKSPDPSVLKDDWLNDLNEEGEVVLKNCLIEESVKDSKAGE TFQFERKGYFTVDSDSSTDKMVFNMTVSLRDSR* back to topmRNA from alignment at tig00000176_pilon:178399..180750- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra9096.t1 ID=Ggra9096.t1|Name=Ggra9096.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2352bp|location=Sequence derived from alignment at tig00000176_pilon:178399..180750- (Gracilaria gracilis GNS1m male) ATGCCTTCAAACTCTGTGAAAGAACTCACGCCGGATGCCCAGGAGCGAGT
TTCAACTCTGGAAGAGTACGGCTTGGAATCACGCCTGGCTCACACCGTTG
GAAAAAGTGAGAAAACTACAAACACGCTCCTTGATGCGTTTACTTGCGCC
TCACTGAGTCCAAAACCACAACATGGAGCGCTCAAAGCGGCCTTGTTATA
CACCGCAACAACAAAGCTGAACTCCCTCGTTGGCAAGAACGGACGCACTC
TTCTTTATAGCGCAGTTGGAGATGGGAAGCTAGATGATTCGCCTCATGTG
GAAGCCGCCGCTGCGTGGTTGAACAGCGTATACAAGAAAGCCGGTGGCTC
TGTTCCGGATACGAAAGTGAAACTAGACGATATCACAATTGACGAAAAGG
AATTTGAGCATGCTGCCGGCGTTGGGGTAGTAGTTTCTGAAGCCGACATT
GAGGCTGCTGTTAGCGAAGCAATCGAATTGAACAAGCCCGAGCTTTTGGA
AAAGCGATATCGCTTCAACTCAGGTTTGATGCAGAGAAAAGTGATGGAAA
AGCTTCGGTTTGCGGACGGAAAGGTTATCAATAGCCTCATTCGTTCCCGC
ATACAAAATTTACTTGGTCCTAAAACTGAAGCAGATCTTGCCAAACCGCC
AAAGGTCAAGAAACAGAAAACAAAGAAGGCACCTGCTGCAAAGAAAGTAG
AGGAGGGAACAGAAGAGGTTGCAGATCCATTTGAGGGTGTACCAAATAGA
TTTGAGGCACGAGGGCTTTCAAGCGCTGAGAACACACCTGAGCTCCTCGA
GAAGCATCGCAAGGCGACTGGGGGCAAGGTGGTGACAAGGTTCCCCCCAG
AGCCAAACGGATACTTGCATGTTGGTCATGCAAAAGCAATGTTCATCGAT
TTTGGGTACGCGAAGAAAATGGCAGGAGAATGTGTGCTGCGCTTTGATGA
CACCAATCCAACGGTGGAGAAGACCGAGTACATTGATGCAATCATAGAAA
TGGTGAAGTGGATGGGACACGAGCCAGTCCGCATCACATACAGCTCAGAC
TATTTTGGAGAATTGTATGATCTTGCTGTCGAGCTTATCAAGAGAGGCAA
AGCTTATGTGTGCCATCAGACAGGTGACGAAATCTCAAAGGGGCGAAAAG
ATGGTGCAGACTCGCCCTGGCGAGACAGGACTGTGGAGGAAAACATTCGT
CTTTTCGACGATATGCGGAAAGGAAAGTACGGTGAAGGCGAAGCAACTCT
TCGTATGAAGATTGACATGAAGCATCCGAACTTGGTCATGCGTGATCCCG
TTGCGTACCGCGTTATTCACGCGCCACACCCCCATGTGGGAGACAAATGG
TGCGTGTATCCATCCTATGATTACACGCATTGCATCGTTGACTCTCTGGA
ATGGATTACACATTCTCTATGCACTTTGGAGTTTGAGATTAGACGTGATT
CTTATTACTGGCTGTTAGAAGCGCTTGACCTTTACCGGCCATTTGTCTGG
GAGTCTTCTAGACTTAACCTGGAATACACGGTGATGTCAAAGAGAAAGCT
GAAGCAGCTGGTAGAACAGGGATACGTCCGCGGATGGGATGATCCTCGAA
TGCCAACCTTAGTTGGAATGAGTCGTCGCGGTTATTCTCCGAACTCGCTC
AACCGCTTCTGCAACGCCATCGGCGTTTCTCGGGCGAATAATGTGATCGG
CATGCACGTTTTAGAACATTGGGTACGAACTGAACATGATTCCAATTCCA
AGAGAGTGTTGGCCGTGTTAAGGCCGTTGAAGATAACTATCAGCAACTTT
AAGGAAAACGAAGTACTTAGCGTCTCTAATCACCCGAAGAAAGAGGGAAT
GGGCAAGCGCGAAGTTTTGCTGACTAAGACTGTTTACATTGAGCGGACTG
ATTTCAGAATGGTTGATGAGAAAGGGTATTATGGCCTTGCACCTGGAAAG
AGTGCAATGTTGCGCTACGCGTATCCAATCAAGGTCATGGATGTGATTAA
AGAAGGCGAAGAGGTTGTGGAACTGGTGGCCGAAATGGACTACAGTAAGT
CTACGAAGCCAAAGGGCGTTCTTCATTGGGTCGGGGAGAATGCAATCTCC
TTCGAGGCTCGTCTGTATAGTACCCTTTTCAAGAGTCCAGACCCTTCAGT
TCTAAAGGACGATTGGCTAAACGATTTGAACGAGGAAGGTGAAGTTGTTT
TGAAGAACTGTTTGATAGAAGAAAGCGTTAAGGATTCAAAGGCGGGGGAA
ACATTCCAGTTTGAACGAAAAGGATACTTCACAGTTGATTCAGATAGCTC
TACTGATAAGATGGTATTCAATATGACAGTTTCACTACGGGACTCGCGTT
AA back to topCoding sequence (CDS) from alignment at tig00000176_pilon:178399..180750- >Ggra9096.t1 ID=Ggra9096.t1|Name=Ggra9096.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2352bp|location=Sequence derived from alignment at tig00000176_pilon:178399..180750- (Gracilaria gracilis GNS1m male) ATGCCTTCAAACTCTGTGAAAGAACTCACGCCGGATGCCCAGGAGCGAGT TTCAACTCTGGAAGAGTACGGCTTGGAATCACGCCTGGCTCACACCGTTG GAAAAAGTGAGAAAACTACAAACACGCTCCTTGATGCGTTTACTTGCGCC TCACTGAGTCCAAAACCACAACATGGAGCGCTCAAAGCGGCCTTGTTATA CACCGCAACAACAAAGCTGAACTCCCTCGTTGGCAAGAACGGACGCACTC TTCTTTATAGCGCAGTTGGAGATGGGAAGCTAGATGATTCGCCTCATGTG GAAGCCGCCGCTGCGTGGTTGAACAGCGTATACAAGAAAGCCGGTGGCTC TGTTCCGGATACGAAAGTGAAACTAGACGATATCACAATTGACGAAAAGG AATTTGAGCATGCTGCCGGCGTTGGGGTAGTAGTTTCTGAAGCCGACATT GAGGCTGCTGTTAGCGAAGCAATCGAATTGAACAAGCCCGAGCTTTTGGA AAAGCGATATCGCTTCAACTCAGGTTTGATGCAGAGAAAAGTGATGGAAA AGCTTCGGTTTGCGGACGGAAAGGTTATCAATAGCCTCATTCGTTCCCGC ATACAAAATTTACTTGGTCCTAAAACTGAAGCAGATCTTGCCAAACCGCC AAAGGTCAAGAAACAGAAAACAAAGAAGGCACCTGCTGCAAAGAAAGTAG AGGAGGGAACAGAAGAGGTTGCAGATCCATTTGAGGGTGTACCAAATAGA TTTGAGGCACGAGGGCTTTCAAGCGCTGAGAACACACCTGAGCTCCTCGA GAAGCATCGCAAGGCGACTGGGGGCAAGGTGGTGACAAGGTTCCCCCCAG AGCCAAACGGATACTTGCATGTTGGTCATGCAAAAGCAATGTTCATCGAT TTTGGGTACGCGAAGAAAATGGCAGGAGAATGTGTGCTGCGCTTTGATGA CACCAATCCAACGGTGGAGAAGACCGAGTACATTGATGCAATCATAGAAA TGGTGAAGTGGATGGGACACGAGCCAGTCCGCATCACATACAGCTCAGAC TATTTTGGAGAATTGTATGATCTTGCTGTCGAGCTTATCAAGAGAGGCAA AGCTTATGTGTGCCATCAGACAGGTGACGAAATCTCAAAGGGGCGAAAAG ATGGTGCAGACTCGCCCTGGCGAGACAGGACTGTGGAGGAAAACATTCGT CTTTTCGACGATATGCGGAAAGGAAAGTACGGTGAAGGCGAAGCAACTCT TCGTATGAAGATTGACATGAAGCATCCGAACTTGGTCATGCGTGATCCCG TTGCGTACCGCGTTATTCACGCGCCACACCCCCATGTGGGAGACAAATGG TGCGTGTATCCATCCTATGATTACACGCATTGCATCGTTGACTCTCTGGA ATGGATTACACATTCTCTATGCACTTTGGAGTTTGAGATTAGACGTGATT CTTATTACTGGCTGTTAGAAGCGCTTGACCTTTACCGGCCATTTGTCTGG GAGTCTTCTAGACTTAACCTGGAATACACGGTGATGTCAAAGAGAAAGCT GAAGCAGCTGGTAGAACAGGGATACGTCCGCGGATGGGATGATCCTCGAA TGCCAACCTTAGTTGGAATGAGTCGTCGCGGTTATTCTCCGAACTCGCTC AACCGCTTCTGCAACGCCATCGGCGTTTCTCGGGCGAATAATGTGATCGG CATGCACGTTTTAGAACATTGGGTACGAACTGAACATGATTCCAATTCCA AGAGAGTGTTGGCCGTGTTAAGGCCGTTGAAGATAACTATCAGCAACTTT AAGGAAAACGAAGTACTTAGCGTCTCTAATCACCCGAAGAAAGAGGGAAT GGGCAAGCGCGAAGTTTTGCTGACTAAGACTGTTTACATTGAGCGGACTG ATTTCAGAATGGTTGATGAGAAAGGGTATTATGGCCTTGCACCTGGAAAG AGTGCAATGTTGCGCTACGCGTATCCAATCAAGGTCATGGATGTGATTAA AGAAGGCGAAGAGGTTGTGGAACTGGTGGCCGAAATGGACTACAGTAAGT CTACGAAGCCAAAGGGCGTTCTTCATTGGGTCGGGGAGAATGCAATCTCC TTCGAGGCTCGTCTGTATAGTACCCTTTTCAAGAGTCCAGACCCTTCAGT TCTAAAGGACGATTGGCTAAACGATTTGAACGAGGAAGGTGAAGTTGTTT TGAAGAACTGTTTGATAGAAGAAAGCGTTAAGGATTCAAAGGCGGGGGAA ACATTCCAGTTTGAACGAAAAGGATACTTCACAGTTGATTCAGATAGCTC TACTGATAAGATGGTATTCAATATGACAGTTTCACTACGGGACTCGCGTT AA back to top
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