Ggra908.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra908.t1
Unique NameGgra908.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length491
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:301471..302943 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra908Ggra908Gracilaria gracilis GNS1m malegenetig00000049_pilon 301471..302943 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra908.t1.stop1Ggra908.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000049_pilon 301471..301473 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra908.t1.CDS1Ggra908.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000049_pilon 301471..302943 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra908.t1.exon1Ggra908.t1.exon1Gracilaria gracilis GNS1m maleexontig00000049_pilon 301471..302943 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra908.t1.start1Ggra908.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000049_pilon 302941..302943 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra908.t1Ggra908.t1Gracilaria gracilis GNS1m malepolypeptidetig00000049_pilon 301471..302943 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra908.t1 ID=Ggra908.t1|Name=Ggra908.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=491bp
MCTIPVDSRFINAIVFILIDVICVMVIISDYFHRVQAIHTAHLLRKGRLL
QLRESRLSAFLPPILSDGHLLTRFLQIFYFVLVAVVFGLTLSVNGVTSTR
LSVIHPRYLTELQPASHLYTAPRLDPSIFSACIVDNGQSIQYFSTSFDTV
LDQTIFDGRALLSENQQPVSIEPSSVSCQSFGNLNPLIQISPCGSEKFEC
FNVFWSPSVSYSVRPSFETDVPQQKTIRVRLGNRPNGLLLLLLNVRLNNT
DLSANDSDTRLICLERPLQGSRASPLFASLNCLLGRWNSDATAFTFRVGF
GTISRPNWNEYLESDSVPNLISFTAFSSELELAWAASEGAEDALSDGLGL
LKEDVVTAREFVDGVFARATVVRQATEQETLLRASEVSVTKITPIGSWSY
TIILLLSSLILVSQCVFRNRFGLNLRDGAQEQVRLDVSDYSGLLTLIASQ
SRDENNVRPEALPFGTVDGEIRPLETREGLRRVPTVHIHV*
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spliced messenger RNA

>Ggra908.t1 ID=Ggra908.t1|Name=Ggra908.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1473bp|location=Sequence derived from alignment at tig00000049_pilon:301471..302943- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGTACCATCCCGGTGGACTCGCGGTTCATCAATGCTATCGTGTTCAT
TCTCATCGACGTCATTTGCGTCATGGTCATCATCTCCGACTACTTTCATC
GAGTCCAAGCTATACACACAGCGCACCTTCTGCGCAAAGGTCGTCTCCTT
CAACTGCGAGAGTCGCGTCTCTCCGCCTTTCTTCCCCCGATTCTCTCGGA
CGGCCATTTACTCACTCGCTTCTTACAGATATTCTATTTTGTACTTGTCG
CTGTCGTCTTCGGTCTAACTCTATCCGTTAACGGTGTCACTAGCACTCGT
CTCTCTGTCATTCATCCTCGCTATCTTACTGAACTGCAGCCAGCATCGCA
TCTGTACACTGCACCGCGTCTCGACCCATCCATATTCTCCGCATGTATTG
TCGACAATGGCCAATCGATACAATACTTCTCAACTTCCTTCGACACAGTG
CTCGACCAAACCATATTCGACGGCCGAGCACTCCTTTCCGAGAATCAACA
ACCTGTATCAATAGAACCAAGCAGTGTATCATGTCAGAGCTTTGGCAATC
TTAACCCTCTTATACAAATATCTCCTTGCGGCTCTGAGAAATTCGAATGC
TTCAATGTGTTTTGGTCGCCATCCGTGTCGTATAGCGTTCGGCCAAGTTT
CGAAACCGATGTTCCCCAGCAAAAAACCATTCGTGTTCGATTGGGCAATC
GGCCAAATGGCCTTTTGCTCCTCCTTCTTAACGTACGATTGAACAACACC
GATTTATCCGCCAACGACAGCGACACTCGTCTCATATGTTTAGAGCGACC
GCTACAAGGAAGTCGTGCATCCCCCTTGTTTGCCAGCCTTAACTGCCTGC
TAGGACGGTGGAATTCGGATGCAACTGCGTTCACTTTTCGTGTCGGCTTT
GGCACAATATCCCGTCCCAATTGGAATGAGTACCTCGAGAGCGACAGCGT
GCCGAACTTGATATCTTTCACAGCGTTTTCGAGTGAGCTAGAGTTAGCGT
GGGCAGCGTCAGAAGGTGCTGAAGATGCTTTGAGTGATGGACTTGGGCTT
CTTAAGGAAGACGTCGTGACCGCTCGAGAGTTTGTGGACGGCGTTTTCGC
GCGTGCAACTGTTGTGCGACAAGCAACCGAGCAGGAAACGCTTCTGCGAG
CGTCTGAGGTTTCGGTTACGAAAATCACGCCGATCGGTTCGTGGTCGTAC
ACCATCATTTTGCTGCTGTCAAGTTTGATACTGGTTTCCCAATGTGTTTT
CCGTAACAGGTTTGGTTTGAACCTAAGAGACGGTGCTCAAGAGCAAGTAC
GACTTGACGTGAGCGACTATAGCGGGCTTTTGACATTGATTGCCTCGCAA
AGTCGAGATGAGAATAATGTGCGACCAGAAGCTTTGCCGTTTGGTACGGT
CGATGGCGAGATTCGACCACTTGAAACAAGAGAGGGATTACGAAGGGTAC
CAACGGTACACATACACGTTTAG
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protein sequence of Ggra908.t1

>Ggra908.t1 ID=Ggra908.t1|Name=Ggra908.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=491bp
MCTIPVDSRFINAIVFILIDVICVMVIISDYFHRVQAIHTAHLLRKGRLL
QLRESRLSAFLPPILSDGHLLTRFLQIFYFVLVAVVFGLTLSVNGVTSTR
LSVIHPRYLTELQPASHLYTAPRLDPSIFSACIVDNGQSIQYFSTSFDTV
LDQTIFDGRALLSENQQPVSIEPSSVSCQSFGNLNPLIQISPCGSEKFEC
FNVFWSPSVSYSVRPSFETDVPQQKTIRVRLGNRPNGLLLLLLNVRLNNT
DLSANDSDTRLICLERPLQGSRASPLFASLNCLLGRWNSDATAFTFRVGF
GTISRPNWNEYLESDSVPNLISFTAFSSELELAWAASEGAEDALSDGLGL
LKEDVVTAREFVDGVFARATVVRQATEQETLLRASEVSVTKITPIGSWSY
TIILLLSSLILVSQCVFRNRFGLNLRDGAQEQVRLDVSDYSGLLTLIASQ
SRDENNVRPEALPFGTVDGEIRPLETREGLRRVPTVHIHV*
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mRNA from alignment at tig00000049_pilon:301471..302943-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra908.t1 ID=Ggra908.t1|Name=Ggra908.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1473bp|location=Sequence derived from alignment at tig00000049_pilon:301471..302943- (Gracilaria gracilis GNS1m male)
ATGTGTACCATCCCGGTGGACTCGCGGTTCATCAATGCTATCGTGTTCAT
TCTCATCGACGTCATTTGCGTCATGGTCATCATCTCCGACTACTTTCATC
GAGTCCAAGCTATACACACAGCGCACCTTCTGCGCAAAGGTCGTCTCCTT
CAACTGCGAGAGTCGCGTCTCTCCGCCTTTCTTCCCCCGATTCTCTCGGA
CGGCCATTTACTCACTCGCTTCTTACAGATATTCTATTTTGTACTTGTCG
CTGTCGTCTTCGGTCTAACTCTATCCGTTAACGGTGTCACTAGCACTCGT
CTCTCTGTCATTCATCCTCGCTATCTTACTGAACTGCAGCCAGCATCGCA
TCTGTACACTGCACCGCGTCTCGACCCATCCATATTCTCCGCATGTATTG
TCGACAATGGCCAATCGATACAATACTTCTCAACTTCCTTCGACACAGTG
CTCGACCAAACCATATTCGACGGCCGAGCACTCCTTTCCGAGAATCAACA
ACCTGTATCAATAGAACCAAGCAGTGTATCATGTCAGAGCTTTGGCAATC
TTAACCCTCTTATACAAATATCTCCTTGCGGCTCTGAGAAATTCGAATGC
TTCAATGTGTTTTGGTCGCCATCCGTGTCGTATAGCGTTCGGCCAAGTTT
CGAAACCGATGTTCCCCAGCAAAAAACCATTCGTGTTCGATTGGGCAATC
GGCCAAATGGCCTTTTGCTCCTCCTTCTTAACGTACGATTGAACAACACC
GATTTATCCGCCAACGACAGCGACACTCGTCTCATATGTTTAGAGCGACC
GCTACAAGGAAGTCGTGCATCCCCCTTGTTTGCCAGCCTTAACTGCCTGC
TAGGACGGTGGAATTCGGATGCAACTGCGTTCACTTTTCGTGTCGGCTTT
GGCACAATATCCCGTCCCAATTGGAATGAGTACCTCGAGAGCGACAGCGT
GCCGAACTTGATATCTTTCACAGCGTTTTCGAGTGAGCTAGAGTTAGCGT
GGGCAGCGTCAGAAGGTGCTGAAGATGCTTTGAGTGATGGACTTGGGCTT
CTTAAGGAAGACGTCGTGACCGCTCGAGAGTTTGTGGACGGCGTTTTCGC
GCGTGCAACTGTTGTGCGACAAGCAACCGAGCAGGAAACGCTTCTGCGAG
CGTCTGAGGTTTCGGTTACGAAAATCACGCCGATCGGTTCGTGGTCGTAC
ACCATCATTTTGCTGCTGTCAAGTTTGATACTGGTTTCCCAATGTGTTTT
CCGTAACAGGTTTGGTTTGAACCTAAGAGACGGTGCTCAAGAGCAAGTAC
GACTTGACGTGAGCGACTATAGCGGGCTTTTGACATTGATTGCCTCGCAA
AGTCGAGATGAGAATAATGTGCGACCAGAAGCTTTGCCGTTTGGTACGGT
CGATGGCGAGATTCGACCACTTGAAACAAGAGAGGGATTACGAAGGGTAC
CAACGGTACACATACACGTTTAG
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Coding sequence (CDS) from alignment at tig00000049_pilon:301471..302943-

>Ggra908.t1 ID=Ggra908.t1|Name=Ggra908.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1473bp|location=Sequence derived from alignment at tig00000049_pilon:301471..302943- (Gracilaria gracilis GNS1m male)
ATGTGTACCATCCCGGTGGACTCGCGGTTCATCAATGCTATCGTGTTCAT
TCTCATCGACGTCATTTGCGTCATGGTCATCATCTCCGACTACTTTCATC
GAGTCCAAGCTATACACACAGCGCACCTTCTGCGCAAAGGTCGTCTCCTT
CAACTGCGAGAGTCGCGTCTCTCCGCCTTTCTTCCCCCGATTCTCTCGGA
CGGCCATTTACTCACTCGCTTCTTACAGATATTCTATTTTGTACTTGTCG
CTGTCGTCTTCGGTCTAACTCTATCCGTTAACGGTGTCACTAGCACTCGT
CTCTCTGTCATTCATCCTCGCTATCTTACTGAACTGCAGCCAGCATCGCA
TCTGTACACTGCACCGCGTCTCGACCCATCCATATTCTCCGCATGTATTG
TCGACAATGGCCAATCGATACAATACTTCTCAACTTCCTTCGACACAGTG
CTCGACCAAACCATATTCGACGGCCGAGCACTCCTTTCCGAGAATCAACA
ACCTGTATCAATAGAACCAAGCAGTGTATCATGTCAGAGCTTTGGCAATC
TTAACCCTCTTATACAAATATCTCCTTGCGGCTCTGAGAAATTCGAATGC
TTCAATGTGTTTTGGTCGCCATCCGTGTCGTATAGCGTTCGGCCAAGTTT
CGAAACCGATGTTCCCCAGCAAAAAACCATTCGTGTTCGATTGGGCAATC
GGCCAAATGGCCTTTTGCTCCTCCTTCTTAACGTACGATTGAACAACACC
GATTTATCCGCCAACGACAGCGACACTCGTCTCATATGTTTAGAGCGACC
GCTACAAGGAAGTCGTGCATCCCCCTTGTTTGCCAGCCTTAACTGCCTGC
TAGGACGGTGGAATTCGGATGCAACTGCGTTCACTTTTCGTGTCGGCTTT
GGCACAATATCCCGTCCCAATTGGAATGAGTACCTCGAGAGCGACAGCGT
GCCGAACTTGATATCTTTCACAGCGTTTTCGAGTGAGCTAGAGTTAGCGT
GGGCAGCGTCAGAAGGTGCTGAAGATGCTTTGAGTGATGGACTTGGGCTT
CTTAAGGAAGACGTCGTGACCGCTCGAGAGTTTGTGGACGGCGTTTTCGC
GCGTGCAACTGTTGTGCGACAAGCAACCGAGCAGGAAACGCTTCTGCGAG
CGTCTGAGGTTTCGGTTACGAAAATCACGCCGATCGGTTCGTGGTCGTAC
ACCATCATTTTGCTGCTGTCAAGTTTGATACTGGTTTCCCAATGTGTTTT
CCGTAACAGGTTTGGTTTGAACCTAAGAGACGGTGCTCAAGAGCAAGTAC
GACTTGACGTGAGCGACTATAGCGGGCTTTTGACATTGATTGCCTCGCAA
AGTCGAGATGAGAATAATGTGCGACCAGAAGCTTTGCCGTTTGGTACGGT
CGATGGCGAGATTCGACCACTTGAAACAAGAGAGGGATTACGAAGGGTAC
CAACGGTACACATACACGTTTAG
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