Ggra9067.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9067.t1
Unique NameGgra9067.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length492
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:86785..88260 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005708566.1
Preferred nameAHCYL1
PFAMsAdoHcyase,AdoHcyase_NAD
Max annot lvl2759|Eukaryota
KEGG rclassRC00041,RC00056,RC00069,RC00475,RC00476,RC01161,RC01243,RC02264
KEGG koko:K01251,ko:K03927
KEGG ReactionR00192,R04936,R08220,R08255,R08258
KEGG Pathwayko00270,ko00983,ko01100,map00270,map00983,map01100
KEGG ModuleM00035
GOsGO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002028,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005856,GO:0005886,GO:0005938,GO:0006082,GO:0006139,GO:0006152,GO:0006378,GO:0006396,GO:0006397,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006611,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006644,GO:0006650,GO:0006656,GO:0006725,GO:0006732,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007154,GO:0007163,GO:0007165,GO:0007186,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008016,GO:0008104,GO:0008150,GO:0008152,GO:0008610,GO:0008652,GO:0008654,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009719,GO:0009725,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010467,GO:0010468,GO:0010765,GO:0010959,GO:0012505,GO:0015031,GO:0015629,GO:0015833,GO:0016020,GO:0016053,GO:0016054,GO:0016070,GO:0016071,GO:0016259,GO:0016324,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019219,GO:0019222,GO:0019439,GO:0019510,GO:0019637,GO:0019752,GO:0022898,GO:0023051,GO:0023052,GO:0030551,GO:0030552,GO:0030554,GO:0031002,GO:0031012,GO:0031123,GO:0031124,GO:0031323,GO:0031440,GO:0031667,GO:0031984,GO:0032259,GO:0032409,GO:0032412,GO:0032432,GO:0032553,GO:0032555,GO:0032559,GO:0032870,GO:0032879,GO:0033036,GO:0033353,GO:0034613,GO:0034641,GO:0034655,GO:0034656,GO:0034762,GO:0034765,GO:0036094,GO:0036293,GO:0038166,GO:0042044,GO:0042045,GO:0042175,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042886,GO:0042995,GO:0043005,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043269,GO:0043270,GO:0043434,GO:0043436,GO:0043621,GO:0043631,GO:0044057,GO:0044070,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045017,GO:0045177,GO:0045184,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046470,GO:0046474,GO:0046483,GO:0046486,GO:0046498,GO:0046500,GO:0046700,GO:0046872,GO:0046907,GO:0046914,GO:0048037,GO:0048511,GO:0048512,GO:0048518,GO:0050662,GO:0050667,GO:0050684,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051168,GO:0051169,GO:0051171,GO:0051179,GO:0051186,GO:0051187,GO:0051234,GO:0051239,GO:0051252,GO:0051287,GO:0051592,GO:0051641,GO:0051649,GO:0051716,GO:0055086,GO:0060255,GO:0062039,GO:0062040,GO:0065007,GO:0065009,GO:0070482,GO:0070633,GO:0070727,GO:0070887,GO:0071268,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072521,GO:0072523,GO:0080090,GO:0090304,GO:0090407,GO:0097159,GO:0097164,GO:0097367,GO:0097458,GO:0098590,GO:0098604,GO:0098827,GO:0099568,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901652,GO:1901653,GO:1901657,GO:1901658,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1903311,GO:1903522,GO:1903779,GO:1904385,GO:1990776
Evalue1.03e-278
EggNOG OGsCOG0499@1|root,KOG1370@2759|Eukaryota
EC3.1.1.1,3.1.1.56,3.1.1.84,3.3.1.1
Descriptionadenosylhomocysteinase activity
COG categoryH
CAZyCE10
BiGG ReactioniRC1080.CRv4_Au5_s3_g11226_t1
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko04147
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9067Ggra9067Gracilaria gracilis GNS1m malegenetig00000176_pilon 86785..88260 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9067.t1.stop1Ggra9067.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000176_pilon 86785..86787 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9067.t1.CDS1Ggra9067.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000176_pilon 86785..88260 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9067.t1.exon1Ggra9067.t1.exon1Gracilaria gracilis GNS1m maleexontig00000176_pilon 86785..88260 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9067.t1.start1Ggra9067.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000176_pilon 88258..88260 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9067.t1Ggra9067.t1Gracilaria gracilis GNS1m malepolypeptidetig00000176_pilon 86785..88260 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9067.t1 ID=Ggra9067.t1|Name=Ggra9067.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=492bp
MTATKVATTKAVSPLPESEYKVKDMSLAEFGRKEMDMAEVEMPGLMACRE
DIGAKKPLAGAKVMGSLHMTIQTAVLIETLKELGADIRWCSCNIFSTQDH
AASAVVAKGTASVFAWKGESLEEYWWCTERALTWPDGSGPDIIVDDGGDA
TLLIHEGFKAEIAFEKDGTMPDPESTDNAEFKVVLSTIRDGLKKNPKRWH
DVVDKMVGVSEETTTGVHRLIERARDGTLLFPAINVNDSVTKSKFDNVYG
CRHSLPDGIMRATDVMLAGKTIMICGYGDVGKGSAQAMKAAGARCLVAEI
DPICALQATMEGFQVARLEDVISEVDIVITATGNKDIVLVKHMEKMKNNA
IVGNIGHFDNEIDIAGLENYEGITKIEIKPQVHRWVFPDGHGIIMLAEGR
LMNLGCATGHPSFVMSCSFTNQTLAQVELWENRASGKYENNVYILPKVLD
EKVARMHLKHLNAKLTELSPHQAEYIGIGSNGPFKPESYRY*
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spliced messenger RNA

>Ggra9067.t1 ID=Ggra9067.t1|Name=Ggra9067.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1476bp|location=Sequence derived from alignment at tig00000176_pilon:86785..88260- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTGCTACTAAAGTGGCGACTACCAAGGCGGTTTCACCGCTGCCGGA
GTCGGAGTACAAAGTCAAGGACATGAGTCTTGCCGAGTTCGGGCGCAAGG
AAATGGACATGGCCGAGGTGGAGATGCCCGGTCTGATGGCCTGCCGCGAG
GATATCGGCGCCAAGAAGCCGCTCGCCGGCGCGAAGGTCATGGGGTCATT
GCACATGACCATTCAGACCGCCGTCCTCATCGAGACGCTCAAGGAACTTG
GCGCCGACATTCGTTGGTGCTCTTGCAATATTTTCTCCACCCAGGATCAT
GCTGCCTCCGCCGTGGTTGCAAAGGGAACTGCTTCGGTGTTTGCCTGGAA
GGGAGAGTCTCTTGAGGAGTATTGGTGGTGCACCGAGAGGGCCCTTACCT
GGCCGGATGGCTCTGGACCGGATATCATCGTCGATGATGGTGGTGATGCT
ACTCTTTTGATTCATGAAGGATTTAAGGCTGAGATCGCATTTGAGAAGGA
CGGTACTATGCCGGACCCTGAATCTACCGATAACGCTGAGTTCAAGGTTG
TTTTGAGCACAATTCGTGACGGGCTCAAGAAGAACCCGAAGCGCTGGCAC
GATGTGGTGGATAAGATGGTGGGCGTGTCTGAGGAGACTACCACTGGTGT
ACATCGTCTGATCGAACGTGCCAGAGACGGTACTTTGTTGTTCCCGGCTA
TCAACGTGAACGACAGTGTGACTAAGAGCAAGTTTGACAACGTGTACGGA
TGCCGTCACTCGCTTCCCGACGGCATTATGAGAGCTACTGACGTTATGCT
TGCCGGTAAGACAATTATGATTTGTGGCTACGGTGACGTGGGAAAGGGAT
CCGCGCAGGCCATGAAGGCTGCGGGTGCACGCTGTCTGGTGGCTGAAATC
GATCCGATCTGCGCGTTGCAGGCTACCATGGAAGGGTTCCAGGTGGCGCG
GCTGGAGGACGTGATTTCCGAGGTTGATATCGTGATCACGGCCACCGGAA
ACAAGGACATTGTTCTGGTAAAGCACATGGAGAAGATGAAGAACAATGCG
ATTGTGGGTAACATTGGTCACTTTGACAACGAGATTGACATTGCCGGGCT
GGAGAACTACGAAGGCATCACCAAGATCGAGATCAAGCCGCAGGTGCACA
GGTGGGTGTTCCCGGACGGTCACGGCATCATCATGCTTGCCGAAGGGCGT
CTGATGAACCTCGGGTGCGCCACCGGTCACCCCAGCTTTGTGATGAGCTG
CTCGTTCACCAACCAGACGCTGGCGCAGGTGGAGTTGTGGGAGAACCGCG
CGTCCGGCAAGTACGAGAACAACGTGTACATCCTGCCCAAGGTTCTGGAT
GAGAAGGTGGCGCGTATGCACTTGAAGCATCTGAATGCCAAGCTGACGGA
GCTGTCGCCGCATCAGGCCGAGTACATTGGCATTGGCTCAAACGGCCCGT
TCAAGCCGGAGAGCTACAGGTATTAA
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protein sequence of Ggra9067.t1

>Ggra9067.t1 ID=Ggra9067.t1|Name=Ggra9067.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=492bp
MTATKVATTKAVSPLPESEYKVKDMSLAEFGRKEMDMAEVEMPGLMACRE
DIGAKKPLAGAKVMGSLHMTIQTAVLIETLKELGADIRWCSCNIFSTQDH
AASAVVAKGTASVFAWKGESLEEYWWCTERALTWPDGSGPDIIVDDGGDA
TLLIHEGFKAEIAFEKDGTMPDPESTDNAEFKVVLSTIRDGLKKNPKRWH
DVVDKMVGVSEETTTGVHRLIERARDGTLLFPAINVNDSVTKSKFDNVYG
CRHSLPDGIMRATDVMLAGKTIMICGYGDVGKGSAQAMKAAGARCLVAEI
DPICALQATMEGFQVARLEDVISEVDIVITATGNKDIVLVKHMEKMKNNA
IVGNIGHFDNEIDIAGLENYEGITKIEIKPQVHRWVFPDGHGIIMLAEGR
LMNLGCATGHPSFVMSCSFTNQTLAQVELWENRASGKYENNVYILPKVLD
EKVARMHLKHLNAKLTELSPHQAEYIGIGSNGPFKPESYRY*
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mRNA from alignment at tig00000176_pilon:86785..88260-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9067.t1 ID=Ggra9067.t1|Name=Ggra9067.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1476bp|location=Sequence derived from alignment at tig00000176_pilon:86785..88260- (Gracilaria gracilis GNS1m male)
ATGACTGCTACTAAAGTGGCGACTACCAAGGCGGTTTCACCGCTGCCGGA
GTCGGAGTACAAAGTCAAGGACATGAGTCTTGCCGAGTTCGGGCGCAAGG
AAATGGACATGGCCGAGGTGGAGATGCCCGGTCTGATGGCCTGCCGCGAG
GATATCGGCGCCAAGAAGCCGCTCGCCGGCGCGAAGGTCATGGGGTCATT
GCACATGACCATTCAGACCGCCGTCCTCATCGAGACGCTCAAGGAACTTG
GCGCCGACATTCGTTGGTGCTCTTGCAATATTTTCTCCACCCAGGATCAT
GCTGCCTCCGCCGTGGTTGCAAAGGGAACTGCTTCGGTGTTTGCCTGGAA
GGGAGAGTCTCTTGAGGAGTATTGGTGGTGCACCGAGAGGGCCCTTACCT
GGCCGGATGGCTCTGGACCGGATATCATCGTCGATGATGGTGGTGATGCT
ACTCTTTTGATTCATGAAGGATTTAAGGCTGAGATCGCATTTGAGAAGGA
CGGTACTATGCCGGACCCTGAATCTACCGATAACGCTGAGTTCAAGGTTG
TTTTGAGCACAATTCGTGACGGGCTCAAGAAGAACCCGAAGCGCTGGCAC
GATGTGGTGGATAAGATGGTGGGCGTGTCTGAGGAGACTACCACTGGTGT
ACATCGTCTGATCGAACGTGCCAGAGACGGTACTTTGTTGTTCCCGGCTA
TCAACGTGAACGACAGTGTGACTAAGAGCAAGTTTGACAACGTGTACGGA
TGCCGTCACTCGCTTCCCGACGGCATTATGAGAGCTACTGACGTTATGCT
TGCCGGTAAGACAATTATGATTTGTGGCTACGGTGACGTGGGAAAGGGAT
CCGCGCAGGCCATGAAGGCTGCGGGTGCACGCTGTCTGGTGGCTGAAATC
GATCCGATCTGCGCGTTGCAGGCTACCATGGAAGGGTTCCAGGTGGCGCG
GCTGGAGGACGTGATTTCCGAGGTTGATATCGTGATCACGGCCACCGGAA
ACAAGGACATTGTTCTGGTAAAGCACATGGAGAAGATGAAGAACAATGCG
ATTGTGGGTAACATTGGTCACTTTGACAACGAGATTGACATTGCCGGGCT
GGAGAACTACGAAGGCATCACCAAGATCGAGATCAAGCCGCAGGTGCACA
GGTGGGTGTTCCCGGACGGTCACGGCATCATCATGCTTGCCGAAGGGCGT
CTGATGAACCTCGGGTGCGCCACCGGTCACCCCAGCTTTGTGATGAGCTG
CTCGTTCACCAACCAGACGCTGGCGCAGGTGGAGTTGTGGGAGAACCGCG
CGTCCGGCAAGTACGAGAACAACGTGTACATCCTGCCCAAGGTTCTGGAT
GAGAAGGTGGCGCGTATGCACTTGAAGCATCTGAATGCCAAGCTGACGGA
GCTGTCGCCGCATCAGGCCGAGTACATTGGCATTGGCTCAAACGGCCCGT
TCAAGCCGGAGAGCTACAGGTATTAA
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Coding sequence (CDS) from alignment at tig00000176_pilon:86785..88260-

>Ggra9067.t1 ID=Ggra9067.t1|Name=Ggra9067.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1476bp|location=Sequence derived from alignment at tig00000176_pilon:86785..88260- (Gracilaria gracilis GNS1m male)
ATGACTGCTACTAAAGTGGCGACTACCAAGGCGGTTTCACCGCTGCCGGA
GTCGGAGTACAAAGTCAAGGACATGAGTCTTGCCGAGTTCGGGCGCAAGG
AAATGGACATGGCCGAGGTGGAGATGCCCGGTCTGATGGCCTGCCGCGAG
GATATCGGCGCCAAGAAGCCGCTCGCCGGCGCGAAGGTCATGGGGTCATT
GCACATGACCATTCAGACCGCCGTCCTCATCGAGACGCTCAAGGAACTTG
GCGCCGACATTCGTTGGTGCTCTTGCAATATTTTCTCCACCCAGGATCAT
GCTGCCTCCGCCGTGGTTGCAAAGGGAACTGCTTCGGTGTTTGCCTGGAA
GGGAGAGTCTCTTGAGGAGTATTGGTGGTGCACCGAGAGGGCCCTTACCT
GGCCGGATGGCTCTGGACCGGATATCATCGTCGATGATGGTGGTGATGCT
ACTCTTTTGATTCATGAAGGATTTAAGGCTGAGATCGCATTTGAGAAGGA
CGGTACTATGCCGGACCCTGAATCTACCGATAACGCTGAGTTCAAGGTTG
TTTTGAGCACAATTCGTGACGGGCTCAAGAAGAACCCGAAGCGCTGGCAC
GATGTGGTGGATAAGATGGTGGGCGTGTCTGAGGAGACTACCACTGGTGT
ACATCGTCTGATCGAACGTGCCAGAGACGGTACTTTGTTGTTCCCGGCTA
TCAACGTGAACGACAGTGTGACTAAGAGCAAGTTTGACAACGTGTACGGA
TGCCGTCACTCGCTTCCCGACGGCATTATGAGAGCTACTGACGTTATGCT
TGCCGGTAAGACAATTATGATTTGTGGCTACGGTGACGTGGGAAAGGGAT
CCGCGCAGGCCATGAAGGCTGCGGGTGCACGCTGTCTGGTGGCTGAAATC
GATCCGATCTGCGCGTTGCAGGCTACCATGGAAGGGTTCCAGGTGGCGCG
GCTGGAGGACGTGATTTCCGAGGTTGATATCGTGATCACGGCCACCGGAA
ACAAGGACATTGTTCTGGTAAAGCACATGGAGAAGATGAAGAACAATGCG
ATTGTGGGTAACATTGGTCACTTTGACAACGAGATTGACATTGCCGGGCT
GGAGAACTACGAAGGCATCACCAAGATCGAGATCAAGCCGCAGGTGCACA
GGTGGGTGTTCCCGGACGGTCACGGCATCATCATGCTTGCCGAAGGGCGT
CTGATGAACCTCGGGTGCGCCACCGGTCACCCCAGCTTTGTGATGAGCTG
CTCGTTCACCAACCAGACGCTGGCGCAGGTGGAGTTGTGGGAGAACCGCG
CGTCCGGCAAGTACGAGAACAACGTGTACATCCTGCCCAAGGTTCTGGAT
GAGAAGGTGGCGCGTATGCACTTGAAGCATCTGAATGCCAAGCTGACGGA
GCTGTCGCCGCATCAGGCCGAGTACATTGGCATTGGCTCAAACGGCCCGT
TCAAGCCGGAGAGCTACAGGTATTAA
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