Ggra8995.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8995.t1
Unique NameGgra8995.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length342
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1078813..1079838 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8995Ggra8995Gracilaria gracilis GNS1m malegenetig00000860_pilon 1078813..1079838 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8995.t1.stop1Ggra8995.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000860_pilon 1078813..1078815 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8995.t1.CDS1Ggra8995.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000860_pilon 1078813..1079838 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8995.t1.exon1Ggra8995.t1.exon1Gracilaria gracilis GNS1m maleexontig00000860_pilon 1078813..1079838 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8995.t1.start1Ggra8995.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000860_pilon 1079836..1079838 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8995.t1Ggra8995.t1Gracilaria gracilis GNS1m malepolypeptidetig00000860_pilon 1078813..1079838 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8995.t1 ID=Ggra8995.t1|Name=Ggra8995.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=342bp
MSQAQPLGALLALTLLALQTLRAHSAPLQATIRTNQSASKLSVTITGTLN
LTTTIHLPASQRAHLRRGATPWKLSTSLHIAAQHGPLSLSLRAAAAAAAH
NRSAAAVAPHAALAMADAAANASAAALSVRASVRGPRADDDAAATTELVA
VRALSVGTAAGVALAGRSGCASLGVQQRASARARRACVQQRSQRLQSRAA
ARALRRNVSGSFAAADAPPSTDGRAAAATAAAAAASGRNSSARASASGAD
GAAAARNGSSVRAAAVRNGAAGAAGASGDAASSSSHARAARGDGDGAALA
LGSGGGGGSGAAAGGRGARATGRSGQLATAVAPRHSARRGR*
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spliced messenger RNA

>Ggra8995.t1 ID=Ggra8995.t1|Name=Ggra8995.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1026bp|location=Sequence derived from alignment at tig00000860_pilon:1078813..1079838- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGCAAGCACAACCGCTCGGAGCGCTGCTCGCGCTCACGCTACTAGC
GTTGCAGACGCTGCGCGCGCACAGCGCGCCGCTGCAAGCGACGATCCGCA
CCAACCAAAGCGCCAGCAAGCTGAGCGTGACAATAACCGGCACGCTCAAC
CTGACCACCACCATCCACCTGCCGGCGTCGCAGCGCGCGCATCTACGGCG
CGGCGCGACGCCATGGAAGCTGTCCACCTCGCTGCACATCGCGGCGCAGC
ACGGGCCGCTGTCGCTGTCACTACGCGCGGCGGCGGCCGCCGCCGCGCAC
AACCGCTCCGCGGCCGCGGTCGCGCCGCACGCCGCGCTGGCGATGGCGGA
CGCCGCCGCCAACGCCAGCGCCGCCGCGCTGTCCGTGCGCGCCAGCGTGC
GCGGCCCGCGCGCCGACGACGACGCCGCCGCGACGACGGAGCTGGTCGCC
GTGCGCGCGCTCTCGGTGGGCACGGCGGCCGGCGTGGCGCTGGCGGGCCG
CTCCGGCTGCGCGTCGCTCGGCGTGCAGCAGCGCGCTTCGGCGCGTGCGC
GCCGCGCCTGTGTGCAGCAGCGTTCGCAGCGCCTGCAGTCGCGGGCGGCG
GCGCGCGCGCTGCGGCGCAACGTGAGCGGCTCGTTCGCCGCGGCTGACGC
GCCGCCGTCAACGGACGGCCGCGCGGCGGCGGCAACGGCGGCGGCGGCGG
CGGCGTCGGGGCGCAACTCCAGCGCGCGCGCGTCGGCAAGCGGCGCAGAT
GGGGCGGCGGCGGCGCGCAACGGCAGCAGCGTGCGCGCGGCGGCGGTGCG
CAACGGCGCGGCCGGAGCGGCGGGCGCGTCGGGCGACGCGGCCAGCAGCA
GCTCGCACGCGCGCGCGGCGCGCGGTGACGGCGATGGCGCGGCGCTCGCG
CTGGGCAGCGGCGGCGGCGGCGGCAGCGGCGCGGCGGCTGGCGGGCGCGG
CGCGCGCGCGACGGGGCGTAGCGGACAGTTAGCCACGGCCGTGGCGCCGC
GTCATTCGGCGCGCCGCGGCCGGTAA
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protein sequence of Ggra8995.t1

>Ggra8995.t1 ID=Ggra8995.t1|Name=Ggra8995.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=342bp
MSQAQPLGALLALTLLALQTLRAHSAPLQATIRTNQSASKLSVTITGTLN
LTTTIHLPASQRAHLRRGATPWKLSTSLHIAAQHGPLSLSLRAAAAAAAH
NRSAAAVAPHAALAMADAAANASAAALSVRASVRGPRADDDAAATTELVA
VRALSVGTAAGVALAGRSGCASLGVQQRASARARRACVQQRSQRLQSRAA
ARALRRNVSGSFAAADAPPSTDGRAAAATAAAAAASGRNSSARASASGAD
GAAAARNGSSVRAAAVRNGAAGAAGASGDAASSSSHARAARGDGDGAALA
LGSGGGGGSGAAAGGRGARATGRSGQLATAVAPRHSARRGR*
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mRNA from alignment at tig00000860_pilon:1078813..1079838-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8995.t1 ID=Ggra8995.t1|Name=Ggra8995.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1026bp|location=Sequence derived from alignment at tig00000860_pilon:1078813..1079838- (Gracilaria gracilis GNS1m male)
ATGTCGCAAGCACAACCGCTCGGAGCGCTGCTCGCGCTCACGCTACTAGC
GTTGCAGACGCTGCGCGCGCACAGCGCGCCGCTGCAAGCGACGATCCGCA
CCAACCAAAGCGCCAGCAAGCTGAGCGTGACAATAACCGGCACGCTCAAC
CTGACCACCACCATCCACCTGCCGGCGTCGCAGCGCGCGCATCTACGGCG
CGGCGCGACGCCATGGAAGCTGTCCACCTCGCTGCACATCGCGGCGCAGC
ACGGGCCGCTGTCGCTGTCACTACGCGCGGCGGCGGCCGCCGCCGCGCAC
AACCGCTCCGCGGCCGCGGTCGCGCCGCACGCCGCGCTGGCGATGGCGGA
CGCCGCCGCCAACGCCAGCGCCGCCGCGCTGTCCGTGCGCGCCAGCGTGC
GCGGCCCGCGCGCCGACGACGACGCCGCCGCGACGACGGAGCTGGTCGCC
GTGCGCGCGCTCTCGGTGGGCACGGCGGCCGGCGTGGCGCTGGCGGGCCG
CTCCGGCTGCGCGTCGCTCGGCGTGCAGCAGCGCGCTTCGGCGCGTGCGC
GCCGCGCCTGTGTGCAGCAGCGTTCGCAGCGCCTGCAGTCGCGGGCGGCG
GCGCGCGCGCTGCGGCGCAACGTGAGCGGCTCGTTCGCCGCGGCTGACGC
GCCGCCGTCAACGGACGGCCGCGCGGCGGCGGCAACGGCGGCGGCGGCGG
CGGCGTCGGGGCGCAACTCCAGCGCGCGCGCGTCGGCAAGCGGCGCAGAT
GGGGCGGCGGCGGCGCGCAACGGCAGCAGCGTGCGCGCGGCGGCGGTGCG
CAACGGCGCGGCCGGAGCGGCGGGCGCGTCGGGCGACGCGGCCAGCAGCA
GCTCGCACGCGCGCGCGGCGCGCGGTGACGGCGATGGCGCGGCGCTCGCG
CTGGGCAGCGGCGGCGGCGGCGGCAGCGGCGCGGCGGCTGGCGGGCGCGG
CGCGCGCGCGACGGGGCGTAGCGGACAGTTAGCCACGGCCGTGGCGCCGC
GTCATTCGGCGCGCCGCGGCCGGTAA
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Coding sequence (CDS) from alignment at tig00000860_pilon:1078813..1079838-

>Ggra8995.t1 ID=Ggra8995.t1|Name=Ggra8995.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1026bp|location=Sequence derived from alignment at tig00000860_pilon:1078813..1079838- (Gracilaria gracilis GNS1m male)
ATGTCGCAAGCACAACCGCTCGGAGCGCTGCTCGCGCTCACGCTACTAGC
GTTGCAGACGCTGCGCGCGCACAGCGCGCCGCTGCAAGCGACGATCCGCA
CCAACCAAAGCGCCAGCAAGCTGAGCGTGACAATAACCGGCACGCTCAAC
CTGACCACCACCATCCACCTGCCGGCGTCGCAGCGCGCGCATCTACGGCG
CGGCGCGACGCCATGGAAGCTGTCCACCTCGCTGCACATCGCGGCGCAGC
ACGGGCCGCTGTCGCTGTCACTACGCGCGGCGGCGGCCGCCGCCGCGCAC
AACCGCTCCGCGGCCGCGGTCGCGCCGCACGCCGCGCTGGCGATGGCGGA
CGCCGCCGCCAACGCCAGCGCCGCCGCGCTGTCCGTGCGCGCCAGCGTGC
GCGGCCCGCGCGCCGACGACGACGCCGCCGCGACGACGGAGCTGGTCGCC
GTGCGCGCGCTCTCGGTGGGCACGGCGGCCGGCGTGGCGCTGGCGGGCCG
CTCCGGCTGCGCGTCGCTCGGCGTGCAGCAGCGCGCTTCGGCGCGTGCGC
GCCGCGCCTGTGTGCAGCAGCGTTCGCAGCGCCTGCAGTCGCGGGCGGCG
GCGCGCGCGCTGCGGCGCAACGTGAGCGGCTCGTTCGCCGCGGCTGACGC
GCCGCCGTCAACGGACGGCCGCGCGGCGGCGGCAACGGCGGCGGCGGCGG
CGGCGTCGGGGCGCAACTCCAGCGCGCGCGCGTCGGCAAGCGGCGCAGAT
GGGGCGGCGGCGGCGCGCAACGGCAGCAGCGTGCGCGCGGCGGCGGTGCG
CAACGGCGCGGCCGGAGCGGCGGGCGCGTCGGGCGACGCGGCCAGCAGCA
GCTCGCACGCGCGCGCGGCGCGCGGTGACGGCGATGGCGCGGCGCTCGCG
CTGGGCAGCGGCGGCGGCGGCGGCAGCGGCGCGGCGGCTGGCGGGCGCGG
CGCGCGCGCGACGGGGCGTAGCGGACAGTTAGCCACGGCCGTGGCGCCGC
GTCATTCGGCGCGCCGCGGCCGGTAA
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