Ggra8900.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8900.t1
Unique NameGgra8900.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1756
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:746012..751279 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005708607.1
PFAMsSec7,Sec7_N
Max annot lvl2759|Eukaryota
KEGG koko:K18442,ko:K18443
KEGG Pathwayko04144,map04144
GOsGO:0000137,GO:0003674,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005795,GO:0005798,GO:0005802,GO:0005829,GO:0006810,GO:0006888,GO:0006890,GO:0006891,GO:0006914,GO:0006996,GO:0007010,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016236,GO:0019898,GO:0019899,GO:0030029,GO:0030036,GO:0031410,GO:0031982,GO:0031984,GO:0031985,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048193,GO:0051020,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061919,GO:0065007,GO:0065009,GO:0071840,GO:0097708,GO:0098772,GO:0098791
Evalue4.42e-172
EggNOG OGsCOG5307@1|root,KOG0928@2759|Eukaryota
Descriptionregulation of ARF protein signal transduction
COG categoryL
BRITEko00000,ko00001,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8900Ggra8900Gracilaria gracilis GNS1m malegenetig00000860_pilon 746012..751279 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8900.t1.stop1Ggra8900.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000860_pilon 746012..746014 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8900.t1.CDS1Ggra8900.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000860_pilon 746012..751279 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8900.t1.exon1Ggra8900.t1.exon1Gracilaria gracilis GNS1m maleexontig00000860_pilon 746012..751279 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8900.t1.start1Ggra8900.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000860_pilon 751277..751279 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8900.t1Ggra8900.t1Gracilaria gracilis GNS1m malepolypeptidetig00000860_pilon 746012..751279 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8900.t1 ID=Ggra8900.t1|Name=Ggra8900.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1756bp
MPDTPISLSVVLLGEARELLSALRRNRRFGYLLSFASTPQPAEHPLVKEV
KSLREVVRVPVSAVLPNQSSPAWSDKSLIPPDALLNALDPFFEVVRSRDA
SGIITGVALKSLDTIAAHIILLAKGKQLLHEYAPALSSIIDAAAACRFDA
TDPASDEVVLSRITRVLTTVICSAALPMLADASVLRSVEACMGIASGRRR
ASILLKSTADAALVEICSAIGEQTHTIITHNKLQQSDVPSIFAHGMSGPA
FGYAFDSDSFNQHGPASVAMIAALVELVSRMADPLYAQSSAERILGLELI
SSLLAAAGSNLRSHPVLKRYLLRDCSRGILRTLGNYQSEPGIIAAAFTIA
TQLVHVLEENGAPLLFALLDRVYPYYISGYENVLPPAMGGNKHRADDQSK
GNPATSQSTLGSSGSLAPVPVELDPVIREIGLESLAALFSTPGLLCVMYR
LADCEMKRTDMVHPLLEALGQAAKTNRFRRRSKRLRASSSGTHRLADATG
DPESDDEDSILPVSGGHPEASRFGRACALLCAEAVLAIIDTISDRLKLET
TGLSSPPSMDYESQKLGRQVRREKKRLQRAGEEFNTSDKINKAAKLIPIL
RSHGFIFKNSDSDGTVSEDLEGDVKAIVRFLRDTPGLSKEKIGVILGEPD
NLSRRVLADYTATFKFAGRPFTESLRVFLESFRLPGEAQKISRIVQSFAD
RYFAQYQESPGAAGSSPENSTDEAGAISFSNDPKQESGSPASTGAPTPEK
PERAQTEESYPGGAVLKSADAAYVLSYSVVMLNTDLHNDSIRNKMTLEDF
VRNCRGLNDKSDFPRWFLSEVYNSIAEVEIRMSDEAGIGALTDLLWDEQV
NRMESEVSDFPTAQSSLVFEEDLFFLSWEAAVVATNSILNEAGDANSVQK
ALEGFLSVTRCATSFRIGRPTDAVISSLCTATTIREGPLHGAAVRFGTDI
KAQMASVALSGVSRQCGDWLQADGWQALVSYLLRLHALCLLPPELEQQLG
GYGPELIVSSAEQPYQSSLIPSWWPSQSSKAGQPFEEEKPKRTTRANGFF
AAILAASIGSELDSDDEDYDDHEDDGAVHGHTRRKVSHIAPSYLRMKTRE
ETEALDLARRCIASCRIEEVVIKEAKVLQSSALEFLSQAIARSAIRVMST
KTDDDGKGTDAPPNTVSVNGNLSVIDWAEIAPQSPTNDSSIIAGVNPRQS
SRATAESDSDYPSFGLSQSWEGSLRERDERKARELIISFCVDALCELTFQ
NRDRLHIPWPALHSLLVRIIAPATYPSSVLERAVVALLRVGVRLLNRPEL
RDDVLRGLNLLVRLPTDTAEALSVPIVIGVHNMIEVHGAIIRSTSGWHAI
LSILENAAHYQPKAREIGLATLTGILRGQYSTEAISSESFAPLLDAILAY
TSSSSVDVSIRALDLLYLLAQRVPTFKEKIEVRKADFESSIVSALGTEQI
DAKPEESMWSEYWSPLFLGFAASIRDSRGKVRNHALGVVERVLALGGSAK
FLSATEWGQTLTSVILPLMTQLFMTHGFLSATIEAEKAAQRKLLAEKSAA
ASVRRSRPRSFAVSAEHDEQLLKSVIAACNRTRMRAIFLTSKSFLQHHSV
IASGLTETAFTELWMAILEVFRVAYNSSVAPEKEILFIKSEIRTPEQDEV
LEHIPETVKNVLLVMCGCGLLSKSDEVRWNATFTMVRDFIPDIDEIVTAA
TQGPLTTNNKQSNSSRENGTGDSVPLRQNDQIEVNAERDGSESIVLSPQE
PVVST*
back to top

spliced messenger RNA

>Ggra8900.t1 ID=Ggra8900.t1|Name=Ggra8900.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=5268bp|location=Sequence derived from alignment at tig00000860_pilon:746012..751279- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTGACACACCTATATCTCTATCCGTCGTTCTTCTCGGCGAAGCCAG
GGAGCTTCTGAGTGCTCTGCGCAGAAATCGCCGTTTCGGCTATCTTCTCT
CGTTCGCCTCTACGCCCCAGCCAGCGGAGCATCCTCTTGTCAAAGAAGTC
AAGTCGCTTCGCGAAGTTGTACGCGTACCAGTGTCTGCCGTCCTTCCGAA
CCAGTCCAGTCCCGCCTGGTCTGACAAGTCCCTCATCCCCCCAGATGCTC
TTCTAAACGCCTTGGATCCCTTTTTTGAGGTGGTGCGCTCCCGCGATGCC
TCAGGCATAATCACCGGTGTGGCGCTAAAGTCATTGGATACAATTGCCGC
GCACATCATTCTGTTAGCCAAAGGGAAACAGTTGCTCCATGAGTATGCAC
CAGCACTCAGTTCTATCATAGATGCTGCTGCCGCCTGCCGCTTCGACGCC
ACTGATCCAGCCTCAGATGAGGTCGTACTGTCACGTATAACGCGAGTGCT
AACTACTGTTATTTGCTCGGCCGCGCTGCCTATGCTCGCGGATGCGTCCG
TTCTGCGATCAGTTGAGGCTTGCATGGGAATCGCATCTGGCAGGCGTCGT
GCATCAATACTGTTGAAGAGCACTGCTGATGCCGCCCTTGTTGAAATTTG
TTCAGCTATTGGCGAGCAGACACATACTATCATAACTCATAACAAACTTC
AACAAAGCGATGTCCCGTCAATATTTGCTCATGGTATGAGTGGGCCGGCC
TTTGGCTATGCTTTTGATTCGGATTCCTTCAATCAGCACGGTCCGGCTTC
TGTGGCGATGATCGCAGCTCTTGTCGAGCTTGTTTCGCGAATGGCGGATC
CTCTTTATGCTCAGTCATCAGCGGAAAGGATTTTGGGATTGGAACTCATA
TCCTCCCTTCTAGCAGCTGCGGGTTCAAATCTCAGGTCACATCCCGTTCT
AAAACGATATTTGCTTAGAGACTGCTCTCGTGGCATTCTACGGACACTTG
GTAACTATCAATCTGAACCAGGCATAATCGCCGCAGCGTTTACAATAGCG
ACTCAACTGGTTCATGTCTTAGAAGAAAACGGAGCCCCGCTTCTGTTTGC
GTTGCTTGACCGTGTGTACCCGTATTATATATCAGGCTACGAGAACGTGT
TACCTCCTGCGATGGGGGGAAATAAACACCGCGCTGATGACCAATCGAAA
GGCAATCCTGCAACCTCACAATCCACGCTTGGAAGCAGCGGCTCGCTTGC
ACCGGTTCCTGTCGAGTTGGATCCTGTTATCAGGGAAATTGGATTGGAAT
CGTTGGCAGCCCTCTTTTCTACACCAGGTCTGCTTTGCGTTATGTATCGA
TTGGCGGACTGCGAAATGAAGAGGACAGATATGGTTCATCCCTTGTTAGA
AGCGCTTGGTCAGGCTGCGAAGACCAATAGATTTCGTCGACGGAGCAAAC
GGCTCCGTGCGTCTTCCAGTGGTACACATCGGCTGGCGGATGCGACAGGG
GATCCTGAGAGTGATGACGAAGACTCCATTTTACCCGTCAGCGGGGGACA
TCCTGAGGCGTCGCGATTTGGAAGAGCTTGCGCTTTGTTATGTGCAGAAG
CTGTGTTAGCTATAATTGACACGATTAGTGACAGGCTGAAGCTGGAAACC
ACTGGACTATCAAGCCCCCCGTCCATGGATTACGAGTCGCAGAAGCTTGG
ACGGCAAGTGCGAAGAGAGAAGAAACGCTTACAGCGAGCCGGAGAAGAGT
TCAACACATCAGACAAAATTAACAAGGCTGCGAAGCTAATACCAATCCTT
CGTAGCCATGGATTCATTTTCAAGAACTCTGACTCGGACGGGACAGTGAG
CGAAGACCTAGAAGGAGACGTCAAGGCTATCGTGCGTTTCCTAAGGGATA
CGCCAGGTCTGAGTAAGGAGAAAATCGGGGTCATTCTTGGGGAACCTGAC
AACCTCTCCAGGCGCGTTCTTGCCGACTACACTGCCACTTTCAAGTTTGC
AGGCAGGCCGTTTACCGAGTCACTCCGAGTGTTTCTTGAAAGTTTCCGTC
TTCCAGGTGAAGCCCAGAAGATAAGCAGAATTGTTCAATCCTTCGCTGAT
AGATACTTCGCCCAGTATCAAGAAAGTCCCGGAGCTGCAGGCTCAAGTCC
AGAAAACTCGACAGATGAAGCTGGAGCCATTAGCTTTTCAAATGACCCTA
AACAAGAATCAGGGAGCCCAGCCAGCACAGGAGCTCCCACGCCTGAGAAG
CCAGAAAGAGCGCAGACAGAAGAGAGTTATCCTGGTGGAGCTGTGCTAAA
GAGCGCCGATGCTGCTTATGTGTTGAGCTACTCGGTAGTTATGCTGAACA
CAGACCTGCACAACGACTCCATCAGGAATAAGATGACTCTGGAAGATTTC
GTGAGAAACTGTCGAGGTCTCAATGATAAGTCCGACTTCCCTCGGTGGTT
CTTGTCTGAGGTATACAATTCTATAGCTGAAGTGGAAATCCGTATGAGTG
ACGAGGCTGGCATCGGGGCACTAACCGACCTTCTCTGGGACGAGCAAGTC
AACCGCATGGAGTCCGAAGTGTCAGATTTCCCGACGGCTCAGAGTTCGCT
TGTGTTTGAGGAGGACCTCTTCTTCCTGTCATGGGAAGCTGCAGTTGTGG
CAACAAACTCAATTCTCAACGAGGCTGGAGACGCCAATTCTGTTCAGAAA
GCCCTTGAAGGATTTCTATCCGTGACAAGATGTGCCACATCGTTTAGGAT
TGGACGGCCAACTGATGCAGTTATTTCCTCTTTGTGCACCGCCACAACTA
TTCGAGAAGGGCCCTTGCATGGTGCTGCTGTACGATTTGGGACGGACATT
AAGGCCCAGATGGCCTCCGTAGCTTTGTCAGGGGTATCTCGTCAGTGTGG
CGACTGGCTGCAAGCCGATGGGTGGCAGGCTCTTGTTTCATATTTGCTAC
GATTGCATGCGCTTTGCCTTCTACCGCCAGAGCTGGAGCAACAACTTGGA
GGATACGGACCAGAATTGATAGTATCCTCTGCTGAACAGCCGTACCAGTC
TTCTCTGATCCCTTCTTGGTGGCCCTCACAATCTTCAAAAGCTGGCCAAC
CCTTCGAAGAAGAGAAGCCGAAACGGACGACAAGGGCGAATGGGTTTTTT
GCTGCAATTCTAGCCGCATCTATTGGTTCTGAGTTGGACTCAGATGACGA
AGATTATGACGATCACGAAGATGATGGTGCGGTACACGGCCATACTCGAA
GGAAGGTGTCGCATATCGCGCCATCATACTTAAGAATGAAAACTCGTGAA
GAAACAGAGGCGTTGGATCTTGCTCGAAGATGCATCGCGAGCTGCCGGAT
AGAAGAGGTGGTAATTAAGGAAGCCAAAGTTTTGCAGTCATCCGCATTGG
AGTTCTTATCTCAAGCAATAGCTCGGTCTGCAATAAGAGTCATGAGTACC
AAAACGGATGACGATGGCAAAGGAACTGATGCGCCTCCCAATACGGTATC
CGTGAATGGCAATCTCTCTGTTATCGACTGGGCAGAAATAGCTCCCCAAA
GTCCAACCAATGATTCCTCCATAATTGCAGGTGTGAATCCAAGACAGTCA
TCAAGGGCCACCGCCGAGTCGGACTCCGACTACCCGTCTTTTGGTTTATC
ACAAAGTTGGGAAGGCTCACTCCGAGAAAGAGATGAAAGAAAAGCGCGAG
AACTTATCATTTCCTTCTGCGTAGACGCACTATGTGAACTAACTTTTCAA
AATCGCGATCGATTGCACATTCCGTGGCCGGCCCTGCACAGCTTGTTGGT
TCGAATTATTGCTCCTGCTACATATCCGTCCTCGGTTCTGGAAAGAGCTG
TTGTAGCCCTACTACGCGTTGGCGTTCGTCTCTTGAATCGTCCAGAACTG
CGAGATGATGTCCTCCGTGGGTTGAATCTTTTGGTTCGCTTGCCTACAGA
TACGGCAGAGGCTCTTTCAGTGCCCATCGTAATAGGTGTTCACAATATGA
TTGAAGTTCATGGTGCTATCATTCGATCCACTTCCGGGTGGCATGCTATC
CTTTCCATTCTCGAAAACGCAGCCCACTACCAACCCAAAGCCAGAGAAAT
TGGTCTTGCAACGTTAACTGGTATACTTCGGGGCCAGTATTCGACTGAGG
CGATATCATCGGAATCATTTGCACCTTTACTGGACGCCATATTGGCATAT
ACATCCAGCTCTTCGGTCGATGTATCTATTCGAGCTCTTGATCTTTTATA
TCTTCTGGCGCAACGGGTTCCTACTTTCAAAGAGAAGATCGAGGTTAGAA
AGGCGGACTTTGAATCTTCAATAGTGTCTGCATTAGGGACTGAACAGATT
GATGCGAAGCCCGAGGAAAGCATGTGGTCTGAATATTGGAGTCCTTTGTT
CTTGGGCTTTGCGGCTTCCATCCGAGATTCTCGGGGCAAAGTGCGCAACC
ATGCACTTGGTGTCGTGGAACGAGTTCTTGCGCTTGGTGGATCTGCTAAG
TTTTTGTCTGCGACAGAATGGGGTCAAACTTTGACGTCTGTCATACTTCC
TTTGATGACACAACTGTTTATGACTCATGGATTTCTTTCGGCTACGATTG
AGGCAGAAAAGGCCGCACAAAGGAAACTACTCGCCGAGAAAAGCGCAGCC
GCGTCTGTCCGAAGGAGCAGACCAAGGTCTTTCGCTGTGTCTGCGGAACA
CGATGAACAATTGTTGAAATCAGTTATTGCTGCCTGCAATCGGACCAGAA
TGCGAGCCATCTTTCTTACTTCAAAGAGTTTTTTACAACACCATTCAGTA
ATAGCAAGTGGTCTCACGGAAACGGCTTTCACTGAGCTTTGGATGGCGAT
ATTGGAAGTATTTCGAGTAGCATACAATAGTAGTGTTGCCCCTGAGAAGG
AAATCCTATTCATTAAGTCGGAGATCAGGACACCAGAACAGGATGAAGTT
CTAGAACATATCCCAGAAACCGTGAAGAACGTATTATTGGTTATGTGTGG
TTGCGGATTGTTGTCAAAATCTGACGAAGTTAGGTGGAACGCCACATTCA
CAATGGTGCGAGATTTCATTCCTGACATTGACGAAATTGTTACGGCTGCC
ACTCAAGGCCCACTAACTACCAACAACAAACAAAGTAACTCATCCAGGGA
AAACGGAACTGGTGACTCCGTGCCACTGAGGCAAAACGACCAAATCGAGG
TGAACGCTGAACGCGACGGATCAGAAAGTATTGTTCTGTCACCGCAAGAA
CCGGTTGTTTCGACCTAA
back to top

protein sequence of Ggra8900.t1

>Ggra8900.t1 ID=Ggra8900.t1|Name=Ggra8900.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1756bp
MPDTPISLSVVLLGEARELLSALRRNRRFGYLLSFASTPQPAEHPLVKEV
KSLREVVRVPVSAVLPNQSSPAWSDKSLIPPDALLNALDPFFEVVRSRDA
SGIITGVALKSLDTIAAHIILLAKGKQLLHEYAPALSSIIDAAAACRFDA
TDPASDEVVLSRITRVLTTVICSAALPMLADASVLRSVEACMGIASGRRR
ASILLKSTADAALVEICSAIGEQTHTIITHNKLQQSDVPSIFAHGMSGPA
FGYAFDSDSFNQHGPASVAMIAALVELVSRMADPLYAQSSAERILGLELI
SSLLAAAGSNLRSHPVLKRYLLRDCSRGILRTLGNYQSEPGIIAAAFTIA
TQLVHVLEENGAPLLFALLDRVYPYYISGYENVLPPAMGGNKHRADDQSK
GNPATSQSTLGSSGSLAPVPVELDPVIREIGLESLAALFSTPGLLCVMYR
LADCEMKRTDMVHPLLEALGQAAKTNRFRRRSKRLRASSSGTHRLADATG
DPESDDEDSILPVSGGHPEASRFGRACALLCAEAVLAIIDTISDRLKLET
TGLSSPPSMDYESQKLGRQVRREKKRLQRAGEEFNTSDKINKAAKLIPIL
RSHGFIFKNSDSDGTVSEDLEGDVKAIVRFLRDTPGLSKEKIGVILGEPD
NLSRRVLADYTATFKFAGRPFTESLRVFLESFRLPGEAQKISRIVQSFAD
RYFAQYQESPGAAGSSPENSTDEAGAISFSNDPKQESGSPASTGAPTPEK
PERAQTEESYPGGAVLKSADAAYVLSYSVVMLNTDLHNDSIRNKMTLEDF
VRNCRGLNDKSDFPRWFLSEVYNSIAEVEIRMSDEAGIGALTDLLWDEQV
NRMESEVSDFPTAQSSLVFEEDLFFLSWEAAVVATNSILNEAGDANSVQK
ALEGFLSVTRCATSFRIGRPTDAVISSLCTATTIREGPLHGAAVRFGTDI
KAQMASVALSGVSRQCGDWLQADGWQALVSYLLRLHALCLLPPELEQQLG
GYGPELIVSSAEQPYQSSLIPSWWPSQSSKAGQPFEEEKPKRTTRANGFF
AAILAASIGSELDSDDEDYDDHEDDGAVHGHTRRKVSHIAPSYLRMKTRE
ETEALDLARRCIASCRIEEVVIKEAKVLQSSALEFLSQAIARSAIRVMST
KTDDDGKGTDAPPNTVSVNGNLSVIDWAEIAPQSPTNDSSIIAGVNPRQS
SRATAESDSDYPSFGLSQSWEGSLRERDERKARELIISFCVDALCELTFQ
NRDRLHIPWPALHSLLVRIIAPATYPSSVLERAVVALLRVGVRLLNRPEL
RDDVLRGLNLLVRLPTDTAEALSVPIVIGVHNMIEVHGAIIRSTSGWHAI
LSILENAAHYQPKAREIGLATLTGILRGQYSTEAISSESFAPLLDAILAY
TSSSSVDVSIRALDLLYLLAQRVPTFKEKIEVRKADFESSIVSALGTEQI
DAKPEESMWSEYWSPLFLGFAASIRDSRGKVRNHALGVVERVLALGGSAK
FLSATEWGQTLTSVILPLMTQLFMTHGFLSATIEAEKAAQRKLLAEKSAA
ASVRRSRPRSFAVSAEHDEQLLKSVIAACNRTRMRAIFLTSKSFLQHHSV
IASGLTETAFTELWMAILEVFRVAYNSSVAPEKEILFIKSEIRTPEQDEV
LEHIPETVKNVLLVMCGCGLLSKSDEVRWNATFTMVRDFIPDIDEIVTAA
TQGPLTTNNKQSNSSRENGTGDSVPLRQNDQIEVNAERDGSESIVLSPQE
PVVST*
back to top

mRNA from alignment at tig00000860_pilon:746012..751279-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8900.t1 ID=Ggra8900.t1|Name=Ggra8900.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=5268bp|location=Sequence derived from alignment at tig00000860_pilon:746012..751279- (Gracilaria gracilis GNS1m male)
ATGCCTGACACACCTATATCTCTATCCGTCGTTCTTCTCGGCGAAGCCAG GGAGCTTCTGAGTGCTCTGCGCAGAAATCGCCGTTTCGGCTATCTTCTCT CGTTCGCCTCTACGCCCCAGCCAGCGGAGCATCCTCTTGTCAAAGAAGTC AAGTCGCTTCGCGAAGTTGTACGCGTACCAGTGTCTGCCGTCCTTCCGAA CCAGTCCAGTCCCGCCTGGTCTGACAAGTCCCTCATCCCCCCAGATGCTC TTCTAAACGCCTTGGATCCCTTTTTTGAGGTGGTGCGCTCCCGCGATGCC TCAGGCATAATCACCGGTGTGGCGCTAAAGTCATTGGATACAATTGCCGC GCACATCATTCTGTTAGCCAAAGGGAAACAGTTGCTCCATGAGTATGCAC CAGCACTCAGTTCTATCATAGATGCTGCTGCCGCCTGCCGCTTCGACGCC ACTGATCCAGCCTCAGATGAGGTCGTACTGTCACGTATAACGCGAGTGCT AACTACTGTTATTTGCTCGGCCGCGCTGCCTATGCTCGCGGATGCGTCCG TTCTGCGATCAGTTGAGGCTTGCATGGGAATCGCATCTGGCAGGCGTCGT GCATCAATACTGTTGAAGAGCACTGCTGATGCCGCCCTTGTTGAAATTTG TTCAGCTATTGGCGAGCAGACACATACTATCATAACTCATAACAAACTTC AACAAAGCGATGTCCCGTCAATATTTGCTCATGGTATGAGTGGGCCGGCC TTTGGCTATGCTTTTGATTCGGATTCCTTCAATCAGCACGGTCCGGCTTC TGTGGCGATGATCGCAGCTCTTGTCGAGCTTGTTTCGCGAATGGCGGATC CTCTTTATGCTCAGTCATCAGCGGAAAGGATTTTGGGATTGGAACTCATA TCCTCCCTTCTAGCAGCTGCGGGTTCAAATCTCAGGTCACATCCCGTTCT AAAACGATATTTGCTTAGAGACTGCTCTCGTGGCATTCTACGGACACTTG GTAACTATCAATCTGAACCAGGCATAATCGCCGCAGCGTTTACAATAGCG ACTCAACTGGTTCATGTCTTAGAAGAAAACGGAGCCCCGCTTCTGTTTGC GTTGCTTGACCGTGTGTACCCGTATTATATATCAGGCTACGAGAACGTGT TACCTCCTGCGATGGGGGGAAATAAACACCGCGCTGATGACCAATCGAAA GGCAATCCTGCAACCTCACAATCCACGCTTGGAAGCAGCGGCTCGCTTGC ACCGGTTCCTGTCGAGTTGGATCCTGTTATCAGGGAAATTGGATTGGAAT CGTTGGCAGCCCTCTTTTCTACACCAGGTCTGCTTTGCGTTATGTATCGA TTGGCGGACTGCGAAATGAAGAGGACAGATATGGTTCATCCCTTGTTAGA AGCGCTTGGTCAGGCTGCGAAGACCAATAGATTTCGTCGACGGAGCAAAC GGCTCCGTGCGTCTTCCAGTGGTACACATCGGCTGGCGGATGCGACAGGG GATCCTGAGAGTGATGACGAAGACTCCATTTTACCCGTCAGCGGGGGACA TCCTGAGGCGTCGCGATTTGGAAGAGCTTGCGCTTTGTTATGTGCAGAAG CTGTGTTAGCTATAATTGACACGATTAGTGACAGGCTGAAGCTGGAAACC ACTGGACTATCAAGCCCCCCGTCCATGGATTACGAGTCGCAGAAGCTTGG ACGGCAAGTGCGAAGAGAGAAGAAACGCTTACAGCGAGCCGGAGAAGAGT TCAACACATCAGACAAAATTAACAAGGCTGCGAAGCTAATACCAATCCTT CGTAGCCATGGATTCATTTTCAAGAACTCTGACTCGGACGGGACAGTGAG CGAAGACCTAGAAGGAGACGTCAAGGCTATCGTGCGTTTCCTAAGGGATA CGCCAGGTCTGAGTAAGGAGAAAATCGGGGTCATTCTTGGGGAACCTGAC AACCTCTCCAGGCGCGTTCTTGCCGACTACACTGCCACTTTCAAGTTTGC AGGCAGGCCGTTTACCGAGTCACTCCGAGTGTTTCTTGAAAGTTTCCGTC TTCCAGGTGAAGCCCAGAAGATAAGCAGAATTGTTCAATCCTTCGCTGAT AGATACTTCGCCCAGTATCAAGAAAGTCCCGGAGCTGCAGGCTCAAGTCC AGAAAACTCGACAGATGAAGCTGGAGCCATTAGCTTTTCAAATGACCCTA AACAAGAATCAGGGAGCCCAGCCAGCACAGGAGCTCCCACGCCTGAGAAG CCAGAAAGAGCGCAGACAGAAGAGAGTTATCCTGGTGGAGCTGTGCTAAA GAGCGCCGATGCTGCTTATGTGTTGAGCTACTCGGTAGTTATGCTGAACA CAGACCTGCACAACGACTCCATCAGGAATAAGATGACTCTGGAAGATTTC GTGAGAAACTGTCGAGGTCTCAATGATAAGTCCGACTTCCCTCGGTGGTT CTTGTCTGAGGTATACAATTCTATAGCTGAAGTGGAAATCCGTATGAGTG ACGAGGCTGGCATCGGGGCACTAACCGACCTTCTCTGGGACGAGCAAGTC AACCGCATGGAGTCCGAAGTGTCAGATTTCCCGACGGCTCAGAGTTCGCT TGTGTTTGAGGAGGACCTCTTCTTCCTGTCATGGGAAGCTGCAGTTGTGG CAACAAACTCAATTCTCAACGAGGCTGGAGACGCCAATTCTGTTCAGAAA GCCCTTGAAGGATTTCTATCCGTGACAAGATGTGCCACATCGTTTAGGAT TGGACGGCCAACTGATGCAGTTATTTCCTCTTTGTGCACCGCCACAACTA TTCGAGAAGGGCCCTTGCATGGTGCTGCTGTACGATTTGGGACGGACATT AAGGCCCAGATGGCCTCCGTAGCTTTGTCAGGGGTATCTCGTCAGTGTGG CGACTGGCTGCAAGCCGATGGGTGGCAGGCTCTTGTTTCATATTTGCTAC GATTGCATGCGCTTTGCCTTCTACCGCCAGAGCTGGAGCAACAACTTGGA GGATACGGACCAGAATTGATAGTATCCTCTGCTGAACAGCCGTACCAGTC TTCTCTGATCCCTTCTTGGTGGCCCTCACAATCTTCAAAAGCTGGCCAAC CCTTCGAAGAAGAGAAGCCGAAACGGACGACAAGGGCGAATGGGTTTTTT GCTGCAATTCTAGCCGCATCTATTGGTTCTGAGTTGGACTCAGATGACGA AGATTATGACGATCACGAAGATGATGGTGCGGTACACGGCCATACTCGAA GGAAGGTGTCGCATATCGCGCCATCATACTTAAGAATGAAAACTCGTGAA GAAACAGAGGCGTTGGATCTTGCTCGAAGATGCATCGCGAGCTGCCGGAT AGAAGAGGTGGTAATTAAGGAAGCCAAAGTTTTGCAGTCATCCGCATTGG AGTTCTTATCTCAAGCAATAGCTCGGTCTGCAATAAGAGTCATGAGTACC AAAACGGATGACGATGGCAAAGGAACTGATGCGCCTCCCAATACGGTATC CGTGAATGGCAATCTCTCTGTTATCGACTGGGCAGAAATAGCTCCCCAAA GTCCAACCAATGATTCCTCCATAATTGCAGGTGTGAATCCAAGACAGTCA TCAAGGGCCACCGCCGAGTCGGACTCCGACTACCCGTCTTTTGGTTTATC ACAAAGTTGGGAAGGCTCACTCCGAGAAAGAGATGAAAGAAAAGCGCGAG AACTTATCATTTCCTTCTGCGTAGACGCACTATGTGAACTAACTTTTCAA AATCGCGATCGATTGCACATTCCGTGGCCGGCCCTGCACAGCTTGTTGGT TCGAATTATTGCTCCTGCTACATATCCGTCCTCGGTTCTGGAAAGAGCTG TTGTAGCCCTACTACGCGTTGGCGTTCGTCTCTTGAATCGTCCAGAACTG CGAGATGATGTCCTCCGTGGGTTGAATCTTTTGGTTCGCTTGCCTACAGA TACGGCAGAGGCTCTTTCAGTGCCCATCGTAATAGGTGTTCACAATATGA TTGAAGTTCATGGTGCTATCATTCGATCCACTTCCGGGTGGCATGCTATC CTTTCCATTCTCGAAAACGCAGCCCACTACCAACCCAAAGCCAGAGAAAT TGGTCTTGCAACGTTAACTGGTATACTTCGGGGCCAGTATTCGACTGAGG CGATATCATCGGAATCATTTGCACCTTTACTGGACGCCATATTGGCATAT ACATCCAGCTCTTCGGTCGATGTATCTATTCGAGCTCTTGATCTTTTATA TCTTCTGGCGCAACGGGTTCCTACTTTCAAAGAGAAGATCGAGGTTAGAA AGGCGGACTTTGAATCTTCAATAGTGTCTGCATTAGGGACTGAACAGATT GATGCGAAGCCCGAGGAAAGCATGTGGTCTGAATATTGGAGTCCTTTGTT CTTGGGCTTTGCGGCTTCCATCCGAGATTCTCGGGGCAAAGTGCGCAACC ATGCACTTGGTGTCGTGGAACGAGTTCTTGCGCTTGGTGGATCTGCTAAG TTTTTGTCTGCGACAGAATGGGGTCAAACTTTGACGTCTGTCATACTTCC TTTGATGACACAACTGTTTATGACTCATGGATTTCTTTCGGCTACGATTG AGGCAGAAAAGGCCGCACAAAGGAAACTACTCGCCGAGAAAAGCGCAGCC GCGTCTGTCCGAAGGAGCAGACCAAGGTCTTTCGCTGTGTCTGCGGAACA CGATGAACAATTGTTGAAATCAGTTATTGCTGCCTGCAATCGGACCAGAA TGCGAGCCATCTTTCTTACTTCAAAGAGTTTTTTACAACACCATTCAGTA ATAGCAAGTGGTCTCACGGAAACGGCTTTCACTGAGCTTTGGATGGCGAT ATTGGAAGTATTTCGAGTAGCATACAATAGTAGTGTTGCCCCTGAGAAGG AAATCCTATTCATTAAGTCGGAGATCAGGACACCAGAACAGGATGAAGTT CTAGAACATATCCCAGAAACCGTGAAGAACGTATTATTGGTTATGTGTGG TTGCGGATTGTTGTCAAAATCTGACGAAGTTAGGTGGAACGCCACATTCA CAATGGTGCGAGATTTCATTCCTGACATTGACGAAATTGTTACGGCTGCC ACTCAAGGCCCACTAACTACCAACAACAAACAAAGTAACTCATCCAGGGA AAACGGAACTGGTGACTCCGTGCCACTGAGGCAAAACGACCAAATCGAGG TGAACGCTGAACGCGACGGATCAGAAAGTATTGTTCTGTCACCGCAAGAA CCGGTTGTTTCGACCTAA
back to top

Coding sequence (CDS) from alignment at tig00000860_pilon:746012..751279-

>Ggra8900.t1 ID=Ggra8900.t1|Name=Ggra8900.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=5268bp|location=Sequence derived from alignment at tig00000860_pilon:746012..751279- (Gracilaria gracilis GNS1m male)
ATGCCTGACACACCTATATCTCTATCCGTCGTTCTTCTCGGCGAAGCCAG
GGAGCTTCTGAGTGCTCTGCGCAGAAATCGCCGTTTCGGCTATCTTCTCT
CGTTCGCCTCTACGCCCCAGCCAGCGGAGCATCCTCTTGTCAAAGAAGTC
AAGTCGCTTCGCGAAGTTGTACGCGTACCAGTGTCTGCCGTCCTTCCGAA
CCAGTCCAGTCCCGCCTGGTCTGACAAGTCCCTCATCCCCCCAGATGCTC
TTCTAAACGCCTTGGATCCCTTTTTTGAGGTGGTGCGCTCCCGCGATGCC
TCAGGCATAATCACCGGTGTGGCGCTAAAGTCATTGGATACAATTGCCGC
GCACATCATTCTGTTAGCCAAAGGGAAACAGTTGCTCCATGAGTATGCAC
CAGCACTCAGTTCTATCATAGATGCTGCTGCCGCCTGCCGCTTCGACGCC
ACTGATCCAGCCTCAGATGAGGTCGTACTGTCACGTATAACGCGAGTGCT
AACTACTGTTATTTGCTCGGCCGCGCTGCCTATGCTCGCGGATGCGTCCG
TTCTGCGATCAGTTGAGGCTTGCATGGGAATCGCATCTGGCAGGCGTCGT
GCATCAATACTGTTGAAGAGCACTGCTGATGCCGCCCTTGTTGAAATTTG
TTCAGCTATTGGCGAGCAGACACATACTATCATAACTCATAACAAACTTC
AACAAAGCGATGTCCCGTCAATATTTGCTCATGGTATGAGTGGGCCGGCC
TTTGGCTATGCTTTTGATTCGGATTCCTTCAATCAGCACGGTCCGGCTTC
TGTGGCGATGATCGCAGCTCTTGTCGAGCTTGTTTCGCGAATGGCGGATC
CTCTTTATGCTCAGTCATCAGCGGAAAGGATTTTGGGATTGGAACTCATA
TCCTCCCTTCTAGCAGCTGCGGGTTCAAATCTCAGGTCACATCCCGTTCT
AAAACGATATTTGCTTAGAGACTGCTCTCGTGGCATTCTACGGACACTTG
GTAACTATCAATCTGAACCAGGCATAATCGCCGCAGCGTTTACAATAGCG
ACTCAACTGGTTCATGTCTTAGAAGAAAACGGAGCCCCGCTTCTGTTTGC
GTTGCTTGACCGTGTGTACCCGTATTATATATCAGGCTACGAGAACGTGT
TACCTCCTGCGATGGGGGGAAATAAACACCGCGCTGATGACCAATCGAAA
GGCAATCCTGCAACCTCACAATCCACGCTTGGAAGCAGCGGCTCGCTTGC
ACCGGTTCCTGTCGAGTTGGATCCTGTTATCAGGGAAATTGGATTGGAAT
CGTTGGCAGCCCTCTTTTCTACACCAGGTCTGCTTTGCGTTATGTATCGA
TTGGCGGACTGCGAAATGAAGAGGACAGATATGGTTCATCCCTTGTTAGA
AGCGCTTGGTCAGGCTGCGAAGACCAATAGATTTCGTCGACGGAGCAAAC
GGCTCCGTGCGTCTTCCAGTGGTACACATCGGCTGGCGGATGCGACAGGG
GATCCTGAGAGTGATGACGAAGACTCCATTTTACCCGTCAGCGGGGGACA
TCCTGAGGCGTCGCGATTTGGAAGAGCTTGCGCTTTGTTATGTGCAGAAG
CTGTGTTAGCTATAATTGACACGATTAGTGACAGGCTGAAGCTGGAAACC
ACTGGACTATCAAGCCCCCCGTCCATGGATTACGAGTCGCAGAAGCTTGG
ACGGCAAGTGCGAAGAGAGAAGAAACGCTTACAGCGAGCCGGAGAAGAGT
TCAACACATCAGACAAAATTAACAAGGCTGCGAAGCTAATACCAATCCTT
CGTAGCCATGGATTCATTTTCAAGAACTCTGACTCGGACGGGACAGTGAG
CGAAGACCTAGAAGGAGACGTCAAGGCTATCGTGCGTTTCCTAAGGGATA
CGCCAGGTCTGAGTAAGGAGAAAATCGGGGTCATTCTTGGGGAACCTGAC
AACCTCTCCAGGCGCGTTCTTGCCGACTACACTGCCACTTTCAAGTTTGC
AGGCAGGCCGTTTACCGAGTCACTCCGAGTGTTTCTTGAAAGTTTCCGTC
TTCCAGGTGAAGCCCAGAAGATAAGCAGAATTGTTCAATCCTTCGCTGAT
AGATACTTCGCCCAGTATCAAGAAAGTCCCGGAGCTGCAGGCTCAAGTCC
AGAAAACTCGACAGATGAAGCTGGAGCCATTAGCTTTTCAAATGACCCTA
AACAAGAATCAGGGAGCCCAGCCAGCACAGGAGCTCCCACGCCTGAGAAG
CCAGAAAGAGCGCAGACAGAAGAGAGTTATCCTGGTGGAGCTGTGCTAAA
GAGCGCCGATGCTGCTTATGTGTTGAGCTACTCGGTAGTTATGCTGAACA
CAGACCTGCACAACGACTCCATCAGGAATAAGATGACTCTGGAAGATTTC
GTGAGAAACTGTCGAGGTCTCAATGATAAGTCCGACTTCCCTCGGTGGTT
CTTGTCTGAGGTATACAATTCTATAGCTGAAGTGGAAATCCGTATGAGTG
ACGAGGCTGGCATCGGGGCACTAACCGACCTTCTCTGGGACGAGCAAGTC
AACCGCATGGAGTCCGAAGTGTCAGATTTCCCGACGGCTCAGAGTTCGCT
TGTGTTTGAGGAGGACCTCTTCTTCCTGTCATGGGAAGCTGCAGTTGTGG
CAACAAACTCAATTCTCAACGAGGCTGGAGACGCCAATTCTGTTCAGAAA
GCCCTTGAAGGATTTCTATCCGTGACAAGATGTGCCACATCGTTTAGGAT
TGGACGGCCAACTGATGCAGTTATTTCCTCTTTGTGCACCGCCACAACTA
TTCGAGAAGGGCCCTTGCATGGTGCTGCTGTACGATTTGGGACGGACATT
AAGGCCCAGATGGCCTCCGTAGCTTTGTCAGGGGTATCTCGTCAGTGTGG
CGACTGGCTGCAAGCCGATGGGTGGCAGGCTCTTGTTTCATATTTGCTAC
GATTGCATGCGCTTTGCCTTCTACCGCCAGAGCTGGAGCAACAACTTGGA
GGATACGGACCAGAATTGATAGTATCCTCTGCTGAACAGCCGTACCAGTC
TTCTCTGATCCCTTCTTGGTGGCCCTCACAATCTTCAAAAGCTGGCCAAC
CCTTCGAAGAAGAGAAGCCGAAACGGACGACAAGGGCGAATGGGTTTTTT
GCTGCAATTCTAGCCGCATCTATTGGTTCTGAGTTGGACTCAGATGACGA
AGATTATGACGATCACGAAGATGATGGTGCGGTACACGGCCATACTCGAA
GGAAGGTGTCGCATATCGCGCCATCATACTTAAGAATGAAAACTCGTGAA
GAAACAGAGGCGTTGGATCTTGCTCGAAGATGCATCGCGAGCTGCCGGAT
AGAAGAGGTGGTAATTAAGGAAGCCAAAGTTTTGCAGTCATCCGCATTGG
AGTTCTTATCTCAAGCAATAGCTCGGTCTGCAATAAGAGTCATGAGTACC
AAAACGGATGACGATGGCAAAGGAACTGATGCGCCTCCCAATACGGTATC
CGTGAATGGCAATCTCTCTGTTATCGACTGGGCAGAAATAGCTCCCCAAA
GTCCAACCAATGATTCCTCCATAATTGCAGGTGTGAATCCAAGACAGTCA
TCAAGGGCCACCGCCGAGTCGGACTCCGACTACCCGTCTTTTGGTTTATC
ACAAAGTTGGGAAGGCTCACTCCGAGAAAGAGATGAAAGAAAAGCGCGAG
AACTTATCATTTCCTTCTGCGTAGACGCACTATGTGAACTAACTTTTCAA
AATCGCGATCGATTGCACATTCCGTGGCCGGCCCTGCACAGCTTGTTGGT
TCGAATTATTGCTCCTGCTACATATCCGTCCTCGGTTCTGGAAAGAGCTG
TTGTAGCCCTACTACGCGTTGGCGTTCGTCTCTTGAATCGTCCAGAACTG
CGAGATGATGTCCTCCGTGGGTTGAATCTTTTGGTTCGCTTGCCTACAGA
TACGGCAGAGGCTCTTTCAGTGCCCATCGTAATAGGTGTTCACAATATGA
TTGAAGTTCATGGTGCTATCATTCGATCCACTTCCGGGTGGCATGCTATC
CTTTCCATTCTCGAAAACGCAGCCCACTACCAACCCAAAGCCAGAGAAAT
TGGTCTTGCAACGTTAACTGGTATACTTCGGGGCCAGTATTCGACTGAGG
CGATATCATCGGAATCATTTGCACCTTTACTGGACGCCATATTGGCATAT
ACATCCAGCTCTTCGGTCGATGTATCTATTCGAGCTCTTGATCTTTTATA
TCTTCTGGCGCAACGGGTTCCTACTTTCAAAGAGAAGATCGAGGTTAGAA
AGGCGGACTTTGAATCTTCAATAGTGTCTGCATTAGGGACTGAACAGATT
GATGCGAAGCCCGAGGAAAGCATGTGGTCTGAATATTGGAGTCCTTTGTT
CTTGGGCTTTGCGGCTTCCATCCGAGATTCTCGGGGCAAAGTGCGCAACC
ATGCACTTGGTGTCGTGGAACGAGTTCTTGCGCTTGGTGGATCTGCTAAG
TTTTTGTCTGCGACAGAATGGGGTCAAACTTTGACGTCTGTCATACTTCC
TTTGATGACACAACTGTTTATGACTCATGGATTTCTTTCGGCTACGATTG
AGGCAGAAAAGGCCGCACAAAGGAAACTACTCGCCGAGAAAAGCGCAGCC
GCGTCTGTCCGAAGGAGCAGACCAAGGTCTTTCGCTGTGTCTGCGGAACA
CGATGAACAATTGTTGAAATCAGTTATTGCTGCCTGCAATCGGACCAGAA
TGCGAGCCATCTTTCTTACTTCAAAGAGTTTTTTACAACACCATTCAGTA
ATAGCAAGTGGTCTCACGGAAACGGCTTTCACTGAGCTTTGGATGGCGAT
ATTGGAAGTATTTCGAGTAGCATACAATAGTAGTGTTGCCCCTGAGAAGG
AAATCCTATTCATTAAGTCGGAGATCAGGACACCAGAACAGGATGAAGTT
CTAGAACATATCCCAGAAACCGTGAAGAACGTATTATTGGTTATGTGTGG
TTGCGGATTGTTGTCAAAATCTGACGAAGTTAGGTGGAACGCCACATTCA
CAATGGTGCGAGATTTCATTCCTGACATTGACGAAATTGTTACGGCTGCC
ACTCAAGGCCCACTAACTACCAACAACAAACAAAGTAACTCATCCAGGGA
AAACGGAACTGGTGACTCCGTGCCACTGAGGCAAAACGACCAAATCGAGG
TGAACGCTGAACGCGACGGATCAGAAAGTATTGTTCTGTCACCGCAAGAA
CCGGTTGTTTCGACCTAA
back to top