Ggra8879.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ggra8879.t1
Unique Name	Ggra8879.t1
Type	mRNA
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	659

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000860_pilon	contig	tig00000860_pilon:621019..622995 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	2880.D7G0K9
Preferred name	PHO89
PFAMs	PHO4
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K01280,ko:K03306,ko:K14640
KEGG TC	2.A.20,2.A.20.2
GOs	GO:0003674,GO:0005215,GO:0005315,GO:0005436,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006817,GO:0006820,GO:0008150,GO:0008324,GO:0012505,GO:0015075,GO:0015077,GO:0015081,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015319,GO:0015370,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0035725,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662
Evalue	7.48e-98
EggNOG OGs	COG0306@1\|root,KOG2493@2759\|Eukaryota
EC	3.4.14.10
Description	inorganic phosphate transmembrane transporter activity
COG category	U
BRITE	ko00000,ko01000,ko01002,ko02000,ko03110

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra8879	Ggra8879	Gracilaria gracilis GNS1m male	gene	tig00000860_pilon 621019..622995 +

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra8879.t1.start1	Ggra8879.t1.start1	Gracilaria gracilis GNS1m male	start_codon	tig00000860_pilon 621019..621021 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra8879.t1.CDS1	Ggra8879.t1.CDS1	Gracilaria gracilis GNS1m male	CDS	tig00000860_pilon 621019..622995 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra8879.t1.exon1	Ggra8879.t1.exon1	Gracilaria gracilis GNS1m male	exon	tig00000860_pilon 621019..622995 +

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra8879.t1.stop1	Ggra8879.t1.stop1	Gracilaria gracilis GNS1m male	stop_codon	tig00000860_pilon 622993..622995 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra8879.t1	Ggra8879.t1	Gracilaria gracilis GNS1m male	polypeptide	tig00000860_pilon 621019..622995 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000860_pilon:621019..622995+
coding sequence from alignment at tig00000860_pilon:621019..622995+

mRNA sequence

>Ggra8879.t1 ID=Ggra8879.t1|Name=Ggra8879.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=659bp
MAAPTLQYNWNNVLRDVVNQGLDVELGAAVQVNSVASYYWMVVVGGIFAF
AMAWGIGANDVANAFATSVGAGSLSLKWACVIAAVMEFAGALLLGGNVSD
TVRKKIIDPDVFDPNMENGALNGPEMLMTGFLVALMAATTWLVIATYLSL
PVSTTHSIIGALVGVGIAYRGAGTVNWWEGDSFKSKLRGVVGVILSWIIS
PAVSAMFAIIFFIIVRSLVLRRSDPFRNGLIFMPLFYGFTVALAVFFIIY
KGDSRFDIAEDLGVGPCVGIALGSGLLVMIVSIFTIVPLAKRYVERWEVR
QKEAAENPEIAEKAKEKSQKVDAALKKVGVRVNIEEELDEDVIRIHENVE
EFDPKTEQLFTWIQIFTAAFDSFAHGANDVANAIAPFASIFQLHRNHGVI
SRPNVDKFDSDGTFTEGELRDTNFKDGDKLPNQETYCGTFEEEEYFRCGP
AAFPFLQPQAADAAERTFDGYDDQGNLIQSDVMCHTTCNRGSADPYEAFK
QEVPIWILAMGGAGIVLGLAMWGYRIILAIGVKLTKLTPSRGFAIEIGAA
ITVLIASQIGIPVSTTHCQVGATIGVGVVEFKKNTVNWKQFLFICIGWVF
TVVFTGLVAAIIYLIITRSPMNFAAMATELNYCPGQRLFVFDSETRSFRG
ISCSGVDF*

spliced messenger RNA

>Ggra8879.t1 ID=Ggra8879.t1|Name=Ggra8879.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1977bp|location=Sequence derived from alignment at tig00000860_pilon:621019..622995+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGCACCCACGCTCCAATACAACTGGAACAATGTGCTTCGGGACGT
CGTCAACCAAGGCTTGGACGTTGAGCTTGGAGCTGCCGTGCAGGTAAACT
CTGTTGCGAGTTACTACTGGATGGTGGTGGTGGGCGGCATATTCGCCTTT
GCCATGGCGTGGGGCATCGGTGCTAATGATGTCGCAAACGCATTCGCCAC
TTCTGTCGGTGCTGGCTCACTCAGTCTCAAGTGGGCCTGTGTCATTGCCG
CCGTCATGGAGTTCGCAGGCGCTCTTCTGCTCGGTGGAAATGTGTCTGAT
ACTGTCCGAAAGAAGATCATCGACCCAGATGTGTTTGACCCCAACATGGA
AAATGGAGCGCTCAATGGTCCAGAGATGCTCATGACTGGCTTTTTGGTTG
CGCTCATGGCCGCTACTACATGGCTCGTTATCGCTACCTATCTCAGTCTT
CCAGTGTCTACCACCCACTCCATCATTGGTGCGCTTGTTGGTGTCGGTAT
TGCCTACCGTGGTGCCGGTACCGTCAACTGGTGGGAGGGTGATTCGTTCA
AGAGCAAGCTCAGGGGTGTTGTGGGCGTCATATTGTCTTGGATTATATCG
CCAGCTGTTTCAGCCATGTTTGCTATCATCTTCTTCATCATTGTGCGTTC
ACTCGTGTTGCGTCGAAGCGATCCCTTCAGAAACGGACTCATCTTCATGC
CTTTGTTCTACGGCTTCACAGTTGCGCTTGCAGTGTTTTTCATCATCTAC
AAGGGTGATTCTCGTTTCGATATTGCCGAGGACCTCGGAGTTGGTCCATG
CGTTGGTATTGCTCTCGGTTCGGGTTTATTGGTTATGATCGTATCCATCT
TCACCATCGTCCCCCTGGCAAAGCGTTACGTTGAGCGCTGGGAAGTTCGT
CAAAAAGAAGCTGCCGAAAACCCAGAGATTGCAGAGAAGGCCAAGGAGAA
GTCCCAGAAGGTTGATGCCGCTCTCAAGAAGGTTGGTGTCAGGGTGAATA
TTGAGGAGGAACTTGATGAAGATGTCATCCGCATTCATGAGAACGTCGAG
GAGTTTGACCCCAAGACTGAGCAGCTCTTCACTTGGATTCAGATCTTCAC
AGCTGCCTTCGACTCCTTTGCTCATGGTGCTAATGACGTTGCTAATGCAA
TTGCCCCTTTCGCTTCCATCTTCCAGCTTCATCGTAACCATGGAGTTATA
AGCAGGCCGAATGTAGACAAGTTTGACAGCGACGGCACCTTCACTGAAGG
TGAGCTAAGGGATACCAACTTTAAGGACGGAGACAAACTCCCAAATCAAG
AAACGTACTGCGGCACCTTCGAAGAAGAGGAGTACTTCAGATGTGGACCT
GCTGCCTTTCCGTTCTTGCAACCCCAGGCAGCAGATGCTGCAGAACGAAC
ATTTGATGGCTATGATGATCAGGGAAATCTGATCCAGAGTGACGTTATGT
GTCACACTACGTGTAACAGAGGCTCAGCCGATCCGTATGAAGCCTTCAAG
CAGGAAGTGCCCATTTGGATCTTGGCAATGGGTGGTGCTGGAATTGTCCT
CGGCCTTGCCATGTGGGGATACCGCATCATTCTAGCTATTGGCGTTAAGT
TGACCAAGCTCACCCCCTCTCGAGGCTTCGCCATTGAGATCGGTGCCGCC
ATCACAGTGCTCATCGCCTCGCAAATCGGAATCCCTGTGTCTACAACTCA
CTGTCAAGTTGGAGCTACCATTGGCGTCGGTGTTGTCGAATTCAAGAAGA
ACACTGTCAATTGGAAGCAATTCCTCTTCATTTGCATAGGTTGGGTGTTC
ACTGTTGTGTTCACCGGTCTAGTTGCAGCAATCATATATCTTATTATAAC
ACGTAGTCCCATGAACTTCGCGGCCATGGCTACGGAGCTGAATTACTGCC
CAGGGCAGCGTTTGTTCGTGTTCGATTCGGAAACCAGATCATTCCGCGGT
ATTTCGTGTTCTGGTGTGGACTTTTAG

protein sequence of Ggra8879.t1

>Ggra8879.t1 ID=Ggra8879.t1|Name=Ggra8879.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=659bp
MAAPTLQYNWNNVLRDVVNQGLDVELGAAVQVNSVASYYWMVVVGGIFAF
AMAWGIGANDVANAFATSVGAGSLSLKWACVIAAVMEFAGALLLGGNVSD
TVRKKIIDPDVFDPNMENGALNGPEMLMTGFLVALMAATTWLVIATYLSL
PVSTTHSIIGALVGVGIAYRGAGTVNWWEGDSFKSKLRGVVGVILSWIIS
PAVSAMFAIIFFIIVRSLVLRRSDPFRNGLIFMPLFYGFTVALAVFFIIY
KGDSRFDIAEDLGVGPCVGIALGSGLLVMIVSIFTIVPLAKRYVERWEVR
QKEAAENPEIAEKAKEKSQKVDAALKKVGVRVNIEEELDEDVIRIHENVE
EFDPKTEQLFTWIQIFTAAFDSFAHGANDVANAIAPFASIFQLHRNHGVI
SRPNVDKFDSDGTFTEGELRDTNFKDGDKLPNQETYCGTFEEEEYFRCGP
AAFPFLQPQAADAAERTFDGYDDQGNLIQSDVMCHTTCNRGSADPYEAFK
QEVPIWILAMGGAGIVLGLAMWGYRIILAIGVKLTKLTPSRGFAIEIGAA
ITVLIASQIGIPVSTTHCQVGATIGVGVVEFKKNTVNWKQFLFICIGWVF
TVVFTGLVAAIIYLIITRSPMNFAAMATELNYCPGQRLFVFDSETRSFRG
ISCSGVDF*

mRNA from alignment at tig00000860_pilon:621019..622995+

Legend: start_codonpolypeptideCDSexonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ggra8879.t1 ID=Ggra8879.t1|Name=Ggra8879.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1977bp|location=Sequence derived from alignment at tig00000860_pilon:621019..622995+ (Gracilaria gracilis GNS1m male)
ATGGCTGCACCCACGCTCCAATACAACTGGAACAATGTGCTTCGGGACGT
CGTCAACCAAGGCTTGGACGTTGAGCTTGGAGCTGCCGTGCAGGTAAACT
CTGTTGCGAGTTACTACTGGATGGTGGTGGTGGGCGGCATATTCGCCTTT
GCCATGGCGTGGGGCATCGGTGCTAATGATGTCGCAAACGCATTCGCCAC
TTCTGTCGGTGCTGGCTCACTCAGTCTCAAGTGGGCCTGTGTCATTGCCG
CCGTCATGGAGTTCGCAGGCGCTCTTCTGCTCGGTGGAAATGTGTCTGAT
ACTGTCCGAAAGAAGATCATCGACCCAGATGTGTTTGACCCCAACATGGA
AAATGGAGCGCTCAATGGTCCAGAGATGCTCATGACTGGCTTTTTGGTTG
CGCTCATGGCCGCTACTACATGGCTCGTTATCGCTACCTATCTCAGTCTT
CCAGTGTCTACCACCCACTCCATCATTGGTGCGCTTGTTGGTGTCGGTAT
TGCCTACCGTGGTGCCGGTACCGTCAACTGGTGGGAGGGTGATTCGTTCA
AGAGCAAGCTCAGGGGTGTTGTGGGCGTCATATTGTCTTGGATTATATCG
CCAGCTGTTTCAGCCATGTTTGCTATCATCTTCTTCATCATTGTGCGTTC
ACTCGTGTTGCGTCGAAGCGATCCCTTCAGAAACGGACTCATCTTCATGC
CTTTGTTCTACGGCTTCACAGTTGCGCTTGCAGTGTTTTTCATCATCTAC
AAGGGTGATTCTCGTTTCGATATTGCCGAGGACCTCGGAGTTGGTCCATG
CGTTGGTATTGCTCTCGGTTCGGGTTTATTGGTTATGATCGTATCCATCT
TCACCATCGTCCCCCTGGCAAAGCGTTACGTTGAGCGCTGGGAAGTTCGT
CAAAAAGAAGCTGCCGAAAACCCAGAGATTGCAGAGAAGGCCAAGGAGAA
GTCCCAGAAGGTTGATGCCGCTCTCAAGAAGGTTGGTGTCAGGGTGAATA
TTGAGGAGGAACTTGATGAAGATGTCATCCGCATTCATGAGAACGTCGAG
GAGTTTGACCCCAAGACTGAGCAGCTCTTCACTTGGATTCAGATCTTCAC
AGCTGCCTTCGACTCCTTTGCTCATGGTGCTAATGACGTTGCTAATGCAA
TTGCCCCTTTCGCTTCCATCTTCCAGCTTCATCGTAACCATGGAGTTATA
AGCAGGCCGAATGTAGACAAGTTTGACAGCGACGGCACCTTCACTGAAGG
TGAGCTAAGGGATACCAACTTTAAGGACGGAGACAAACTCCCAAATCAAG
AAACGTACTGCGGCACCTTCGAAGAAGAGGAGTACTTCAGATGTGGACCT
GCTGCCTTTCCGTTCTTGCAACCCCAGGCAGCAGATGCTGCAGAACGAAC
ATTTGATGGCTATGATGATCAGGGAAATCTGATCCAGAGTGACGTTATGT
GTCACACTACGTGTAACAGAGGCTCAGCCGATCCGTATGAAGCCTTCAAG
CAGGAAGTGCCCATTTGGATCTTGGCAATGGGTGGTGCTGGAATTGTCCT
CGGCCTTGCCATGTGGGGATACCGCATCATTCTAGCTATTGGCGTTAAGT
TGACCAAGCTCACCCCCTCTCGAGGCTTCGCCATTGAGATCGGTGCCGCC
ATCACAGTGCTCATCGCCTCGCAAATCGGAATCCCTGTGTCTACAACTCA
CTGTCAAGTTGGAGCTACCATTGGCGTCGGTGTTGTCGAATTCAAGAAGA
ACACTGTCAATTGGAAGCAATTCCTCTTCATTTGCATAGGTTGGGTGTTC
ACTGTTGTGTTCACCGGTCTAGTTGCAGCAATCATATATCTTATTATAAC
ACGTAGTCCCATGAACTTCGCGGCCATGGCTACGGAGCTGAATTACTGCC
CAGGGCAGCGTTTGTTCGTGTTCGATTCGGAAACCAGATCATTCCGCGGT
ATTTCGTGTTCTGGTGTGGACTTTTAG

Coding sequence (CDS) from alignment at tig00000860_pilon:621019..622995+

>Ggra8879.t1 ID=Ggra8879.t1|Name=Ggra8879.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1977bp|location=Sequence derived from alignment at tig00000860_pilon:621019..622995+ (Gracilaria gracilis GNS1m male)
ATGGCTGCACCCACGCTCCAATACAACTGGAACAATGTGCTTCGGGACGT
CGTCAACCAAGGCTTGGACGTTGAGCTTGGAGCTGCCGTGCAGGTAAACT
CTGTTGCGAGTTACTACTGGATGGTGGTGGTGGGCGGCATATTCGCCTTT
GCCATGGCGTGGGGCATCGGTGCTAATGATGTCGCAAACGCATTCGCCAC
TTCTGTCGGTGCTGGCTCACTCAGTCTCAAGTGGGCCTGTGTCATTGCCG
CCGTCATGGAGTTCGCAGGCGCTCTTCTGCTCGGTGGAAATGTGTCTGAT
ACTGTCCGAAAGAAGATCATCGACCCAGATGTGTTTGACCCCAACATGGA
AAATGGAGCGCTCAATGGTCCAGAGATGCTCATGACTGGCTTTTTGGTTG
CGCTCATGGCCGCTACTACATGGCTCGTTATCGCTACCTATCTCAGTCTT
CCAGTGTCTACCACCCACTCCATCATTGGTGCGCTTGTTGGTGTCGGTAT
TGCCTACCGTGGTGCCGGTACCGTCAACTGGTGGGAGGGTGATTCGTTCA
AGAGCAAGCTCAGGGGTGTTGTGGGCGTCATATTGTCTTGGATTATATCG
CCAGCTGTTTCAGCCATGTTTGCTATCATCTTCTTCATCATTGTGCGTTC
ACTCGTGTTGCGTCGAAGCGATCCCTTCAGAAACGGACTCATCTTCATGC
CTTTGTTCTACGGCTTCACAGTTGCGCTTGCAGTGTTTTTCATCATCTAC
AAGGGTGATTCTCGTTTCGATATTGCCGAGGACCTCGGAGTTGGTCCATG
CGTTGGTATTGCTCTCGGTTCGGGTTTATTGGTTATGATCGTATCCATCT
TCACCATCGTCCCCCTGGCAAAGCGTTACGTTGAGCGCTGGGAAGTTCGT
CAAAAAGAAGCTGCCGAAAACCCAGAGATTGCAGAGAAGGCCAAGGAGAA
GTCCCAGAAGGTTGATGCCGCTCTCAAGAAGGTTGGTGTCAGGGTGAATA
TTGAGGAGGAACTTGATGAAGATGTCATCCGCATTCATGAGAACGTCGAG
GAGTTTGACCCCAAGACTGAGCAGCTCTTCACTTGGATTCAGATCTTCAC
AGCTGCCTTCGACTCCTTTGCTCATGGTGCTAATGACGTTGCTAATGCAA
TTGCCCCTTTCGCTTCCATCTTCCAGCTTCATCGTAACCATGGAGTTATA
AGCAGGCCGAATGTAGACAAGTTTGACAGCGACGGCACCTTCACTGAAGG
TGAGCTAAGGGATACCAACTTTAAGGACGGAGACAAACTCCCAAATCAAG
AAACGTACTGCGGCACCTTCGAAGAAGAGGAGTACTTCAGATGTGGACCT
GCTGCCTTTCCGTTCTTGCAACCCCAGGCAGCAGATGCTGCAGAACGAAC
ATTTGATGGCTATGATGATCAGGGAAATCTGATCCAGAGTGACGTTATGT
GTCACACTACGTGTAACAGAGGCTCAGCCGATCCGTATGAAGCCTTCAAG
CAGGAAGTGCCCATTTGGATCTTGGCAATGGGTGGTGCTGGAATTGTCCT
CGGCCTTGCCATGTGGGGATACCGCATCATTCTAGCTATTGGCGTTAAGT
TGACCAAGCTCACCCCCTCTCGAGGCTTCGCCATTGAGATCGGTGCCGCC
ATCACAGTGCTCATCGCCTCGCAAATCGGAATCCCTGTGTCTACAACTCA
CTGTCAAGTTGGAGCTACCATTGGCGTCGGTGTTGTCGAATTCAAGAAGA
ACACTGTCAATTGGAAGCAATTCCTCTTCATTTGCATAGGTTGGGTGTTC
ACTGTTGTGTTCACCGGTCTAGTTGCAGCAATCATATATCTTATTATAAC
ACGTAGTCCCATGAACTTCGCGGCCATGGCTACGGAGCTGAATTACTGCC
CAGGGCAGCGTTTGTTCGTGTTCGATTCGGAAACCAGATCATTCCGCGGT
ATTTCGTGTTCTGGTGTGGACTTTTAG