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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 981085.XP_010094987.1 |
| PFAMs | Sec6 |
| Max annot lvl | 35493|Streptophyta |
| KEGG ko | ko:K06110 |
| Evalue | 3.28e-11 |
| EggNOG OGs | COG5173@1|root,KOG2286@2759|Eukaryota,37QDU@33090|Viridiplantae,3G970@35493|Streptophyta,4JF4X@91835|fabids |
| Description | exocyst complex component |
| COG category | U |
| BRITE | ko00000,ko04131 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra8865.t1.start1 | Ggra8865.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000860_pilon 568852..568854 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra8865.t1.stop1 | Ggra8865.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000860_pilon 571549..571551 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra8865.t1 ID=Ggra8865.t1|Name=Ggra8865.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=900bp MSEIQKEAIRVVSEAISGADGNLLPVIDTAHEKWQIELRDAKSTARKLLA EVLEERQTLRKSLASAADLWRTLQPTHPDDNVTEQPQQPALSHAHSFPAN DAQLAAVRALHNISQTLFWAEFTMEAPRALERATTFLEKIHSNGLDKVVK GNPALLVDAHANLTAAERLRDLILLETPTAESTNPTQWFSKAVETRNLLE DIVLRGIFGNVVQLSQVNPCILVAGARVVESEEAEDQWWKNRIQKGGLEE RGAAVRAFGTHDYKKRALNAIVESLQAQFWQRERELRAFKDTMTNDDIEI TPNLSNEVHVSSILDWIQQRRSETEIVRRYVTPCLPPSFEVSQLYESELH RQFMRLLSQILHLNKPDGSMLLSETDLIRLTSWYSKYRNEVDEQGETIDC FLSERDRKRLISALQQHCAHRITGSIISRLFSDDRMDVGLGTKPHDVSKR KRLGISRSVLCRLDLSQIVMDCVGEQVRRMLDLKMRDLDQAVAQVVSEIL LDFQTEVRQVIANDKIDTAVEEGSYLCATANHMAKCLGFSEELRDSFIPL GLDHHRPEIEERMESVIDGFRSTASVALHVLIDGMRPFLEVHVTRLFAPS TGTEVILDMLAILSDYFKDYKEALLDYHFEYLAIETLKRVVIWYLVPFLR LTHPRLDESVARRFTSLPIFEDQNEDPEDFSESLSRVISTRRSDASSKVL SSSVGLASMSGGAVLALVEKDISNISAFMEKQVPLHQKKQLKPALEPLHA IQALYKCDPTAPAMAEAFQDAKFMIDRALRPLWAMEYGAHGQFGIRNAEK IWETRHELSPSLIVEAINMTRSNIDRIEAQTPSRMSSVDDGRIWSSRYSD PNGSISERFIERQGGYNEQNLSSSSLMWTPKSFNSSVAKRMSAERNTRR* back to topspliced messenger RNA >Ggra8865.t1 ID=Ggra8865.t1|Name=Ggra8865.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2700bp|location=Sequence derived from alignment at tig00000860_pilon:568852..571551+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGTCCGAAATACAAAAAGAAGCTATCCGCGTCGTTTCTGAAGCCATCTC CGGAGCAGATGGCAATCTTCTCCCTGTCATCGACACCGCGCATGAAAAAT GGCAAATTGAGCTACGCGACGCCAAATCCACTGCTCGCAAACTGTTAGCA GAAGTTCTGGAAGAGAGGCAAACGCTACGCAAATCATTAGCATCCGCCGC AGACCTATGGCGAACTCTTCAACCCACCCACCCTGATGACAATGTCACTG AACAACCCCAACAACCCGCACTCTCTCACGCCCACTCCTTTCCAGCCAAC GACGCCCAGCTCGCTGCCGTCAGAGCCTTGCACAATATCTCACAGACTCT GTTCTGGGCAGAGTTTACAATGGAGGCCCCGCGTGCTCTGGAACGAGCCA CCACCTTCCTCGAGAAGATTCATAGTAATGGTTTGGATAAGGTCGTCAAG GGCAACCCCGCATTACTTGTTGATGCCCATGCTAACTTAACCGCCGCTGA AAGACTACGTGACCTCATTTTACTCGAGACACCAACAGCTGAAAGCACAA ACCCCACACAATGGTTCTCCAAGGCAGTTGAAACGCGTAACCTTCTTGAA GATATCGTGCTTCGAGGTATATTCGGAAACGTCGTCCAGCTCTCCCAGGT CAATCCTTGTATCCTCGTTGCGGGTGCGCGCGTTGTAGAGAGTGAAGAGG CTGAAGATCAATGGTGGAAGAATCGCATTCAAAAAGGTGGACTTGAAGAA CGCGGCGCAGCTGTTCGTGCGTTCGGAACTCATGATTATAAGAAACGAGC GCTCAATGCTATTGTAGAGTCTTTGCAAGCACAGTTCTGGCAGAGAGAAC GCGAGCTGCGCGCATTCAAAGACACCATGACAAACGATGACATTGAAATC ACACCAAACCTTAGCAATGAAGTTCATGTGTCAAGCATTTTGGACTGGAT TCAGCAGCGACGTTCCGAGACGGAGATTGTGCGTCGTTACGTAACACCTT GCCTGCCACCGTCGTTTGAAGTTTCCCAGCTATATGAAAGTGAGCTTCAC CGGCAGTTCATGCGGCTTCTAAGTCAGATTCTTCATCTAAACAAACCTGA TGGGTCTATGTTGCTTTCTGAAACTGATCTTATAAGACTAACATCTTGGT ATAGCAAGTATAGGAATGAGGTTGACGAACAAGGAGAAACAATAGATTGC TTCCTCAGCGAAAGAGATCGAAAGCGTCTCATATCTGCTTTGCAACAACA CTGCGCTCACAGGATCACTGGCAGTATCATTTCTCGACTTTTCTCTGACG ATCGTATGGATGTTGGACTCGGCACGAAACCACACGACGTATCAAAGAGA AAGCGGCTAGGAATATCCAGAAGTGTATTATGTCGCCTAGATTTGTCACA GATTGTTATGGATTGCGTCGGTGAGCAGGTGCGAAGAATGCTGGACTTGA AGATGCGTGATTTGGACCAAGCAGTTGCTCAAGTCGTATCCGAAATCTTG CTGGATTTCCAAACAGAAGTACGGCAAGTAATCGCCAACGACAAGATTGA TACAGCTGTGGAAGAAGGTTCGTATCTCTGTGCCACGGCAAACCACATGG CCAAGTGCCTCGGGTTTTCAGAGGAATTGAGAGATTCGTTTATTCCCCTG GGTCTCGATCATCATCGACCGGAAATTGAGGAAAGAATGGAAAGCGTAAT CGATGGGTTCCGCTCAACGGCCTCAGTAGCCCTCCACGTCCTCATCGATG GAATGAGGCCATTCCTAGAAGTTCATGTAACACGCCTTTTTGCTCCGAGC ACGGGCACCGAGGTGATATTGGATATGTTGGCCATACTATCCGATTATTT CAAGGACTACAAAGAGGCTCTACTTGACTACCACTTCGAATATCTGGCCA TCGAAACCTTGAAACGTGTTGTGATTTGGTATCTTGTCCCCTTTTTGCGC TTGACACACCCCCGTCTTGATGAAAGCGTGGCACGACGATTTACATCGCT TCCCATATTTGAAGACCAGAATGAAGATCCTGAGGACTTTTCTGAAAGTT TAAGTAGGGTGATCAGTACAAGACGGAGTGACGCTAGTTCAAAAGTCCTT TCATCGAGTGTGGGTTTAGCTTCCATGAGTGGAGGAGCAGTTCTGGCCCT TGTCGAAAAAGACATCTCAAATATTTCTGCTTTCATGGAGAAACAAGTAC CACTGCACCAAAAGAAACAGTTAAAACCTGCTTTGGAGCCGTTGCATGCC ATTCAAGCATTGTACAAGTGTGACCCTACTGCTCCAGCTATGGCTGAGGC GTTTCAAGATGCGAAATTTATGATCGACAGAGCTCTTCGCCCCCTTTGGG CGATGGAATATGGAGCTCACGGTCAGTTTGGTATTAGAAATGCCGAGAAA ATCTGGGAAACTCGGCATGAGTTGAGTCCCTCCTTAATAGTGGAAGCCAT CAATATGACCAGAAGCAACATAGATCGCATTGAAGCTCAAACTCCCAGCA GAATGTCAAGTGTTGATGATGGGCGTATCTGGAGCTCAAGGTACAGTGAC CCAAATGGTTCGATTTCGGAACGTTTCATAGAAAGACAAGGGGGCTATAA CGAGCAAAACCTTTCATCTTCTTCCTTGATGTGGACACCCAAGTCTTTCA ACAGTAGCGTTGCTAAGAGGATGTCTGCAGAGCGGAATACTCGGCGATGA back to topprotein sequence of Ggra8865.t1 >Ggra8865.t1 ID=Ggra8865.t1|Name=Ggra8865.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=900bp
MSEIQKEAIRVVSEAISGADGNLLPVIDTAHEKWQIELRDAKSTARKLLA EVLEERQTLRKSLASAADLWRTLQPTHPDDNVTEQPQQPALSHAHSFPAN DAQLAAVRALHNISQTLFWAEFTMEAPRALERATTFLEKIHSNGLDKVVK GNPALLVDAHANLTAAERLRDLILLETPTAESTNPTQWFSKAVETRNLLE DIVLRGIFGNVVQLSQVNPCILVAGARVVESEEAEDQWWKNRIQKGGLEE RGAAVRAFGTHDYKKRALNAIVESLQAQFWQRERELRAFKDTMTNDDIEI TPNLSNEVHVSSILDWIQQRRSETEIVRRYVTPCLPPSFEVSQLYESELH RQFMRLLSQILHLNKPDGSMLLSETDLIRLTSWYSKYRNEVDEQGETIDC FLSERDRKRLISALQQHCAHRITGSIISRLFSDDRMDVGLGTKPHDVSKR KRLGISRSVLCRLDLSQIVMDCVGEQVRRMLDLKMRDLDQAVAQVVSEIL LDFQTEVRQVIANDKIDTAVEEGSYLCATANHMAKCLGFSEELRDSFIPL GLDHHRPEIEERMESVIDGFRSTASVALHVLIDGMRPFLEVHVTRLFAPS TGTEVILDMLAILSDYFKDYKEALLDYHFEYLAIETLKRVVIWYLVPFLR LTHPRLDESVARRFTSLPIFEDQNEDPEDFSESLSRVISTRRSDASSKVL SSSVGLASMSGGAVLALVEKDISNISAFMEKQVPLHQKKQLKPALEPLHA IQALYKCDPTAPAMAEAFQDAKFMIDRALRPLWAMEYGAHGQFGIRNAEK IWETRHELSPSLIVEAINMTRSNIDRIEAQTPSRMSSVDDGRIWSSRYSD PNGSISERFIERQGGYNEQNLSSSSLMWTPKSFNSSVAKRMSAERNTRR* back to topmRNA from alignment at tig00000860_pilon:568852..571551+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra8865.t1 ID=Ggra8865.t1|Name=Ggra8865.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2700bp|location=Sequence derived from alignment at tig00000860_pilon:568852..571551+ (Gracilaria gracilis GNS1m male) ATGTCCGAAATACAAAAAGAAGCTATCCGCGTCGTTTCTGAAGCCATCTC
CGGAGCAGATGGCAATCTTCTCCCTGTCATCGACACCGCGCATGAAAAAT
GGCAAATTGAGCTACGCGACGCCAAATCCACTGCTCGCAAACTGTTAGCA
GAAGTTCTGGAAGAGAGGCAAACGCTACGCAAATCATTAGCATCCGCCGC
AGACCTATGGCGAACTCTTCAACCCACCCACCCTGATGACAATGTCACTG
AACAACCCCAACAACCCGCACTCTCTCACGCCCACTCCTTTCCAGCCAAC
GACGCCCAGCTCGCTGCCGTCAGAGCCTTGCACAATATCTCACAGACTCT
GTTCTGGGCAGAGTTTACAATGGAGGCCCCGCGTGCTCTGGAACGAGCCA
CCACCTTCCTCGAGAAGATTCATAGTAATGGTTTGGATAAGGTCGTCAAG
GGCAACCCCGCATTACTTGTTGATGCCCATGCTAACTTAACCGCCGCTGA
AAGACTACGTGACCTCATTTTACTCGAGACACCAACAGCTGAAAGCACAA
ACCCCACACAATGGTTCTCCAAGGCAGTTGAAACGCGTAACCTTCTTGAA
GATATCGTGCTTCGAGGTATATTCGGAAACGTCGTCCAGCTCTCCCAGGT
CAATCCTTGTATCCTCGTTGCGGGTGCGCGCGTTGTAGAGAGTGAAGAGG
CTGAAGATCAATGGTGGAAGAATCGCATTCAAAAAGGTGGACTTGAAGAA
CGCGGCGCAGCTGTTCGTGCGTTCGGAACTCATGATTATAAGAAACGAGC
GCTCAATGCTATTGTAGAGTCTTTGCAAGCACAGTTCTGGCAGAGAGAAC
GCGAGCTGCGCGCATTCAAAGACACCATGACAAACGATGACATTGAAATC
ACACCAAACCTTAGCAATGAAGTTCATGTGTCAAGCATTTTGGACTGGAT
TCAGCAGCGACGTTCCGAGACGGAGATTGTGCGTCGTTACGTAACACCTT
GCCTGCCACCGTCGTTTGAAGTTTCCCAGCTATATGAAAGTGAGCTTCAC
CGGCAGTTCATGCGGCTTCTAAGTCAGATTCTTCATCTAAACAAACCTGA
TGGGTCTATGTTGCTTTCTGAAACTGATCTTATAAGACTAACATCTTGGT
ATAGCAAGTATAGGAATGAGGTTGACGAACAAGGAGAAACAATAGATTGC
TTCCTCAGCGAAAGAGATCGAAAGCGTCTCATATCTGCTTTGCAACAACA
CTGCGCTCACAGGATCACTGGCAGTATCATTTCTCGACTTTTCTCTGACG
ATCGTATGGATGTTGGACTCGGCACGAAACCACACGACGTATCAAAGAGA
AAGCGGCTAGGAATATCCAGAAGTGTATTATGTCGCCTAGATTTGTCACA
GATTGTTATGGATTGCGTCGGTGAGCAGGTGCGAAGAATGCTGGACTTGA
AGATGCGTGATTTGGACCAAGCAGTTGCTCAAGTCGTATCCGAAATCTTG
CTGGATTTCCAAACAGAAGTACGGCAAGTAATCGCCAACGACAAGATTGA
TACAGCTGTGGAAGAAGGTTCGTATCTCTGTGCCACGGCAAACCACATGG
CCAAGTGCCTCGGGTTTTCAGAGGAATTGAGAGATTCGTTTATTCCCCTG
GGTCTCGATCATCATCGACCGGAAATTGAGGAAAGAATGGAAAGCGTAAT
CGATGGGTTCCGCTCAACGGCCTCAGTAGCCCTCCACGTCCTCATCGATG
GAATGAGGCCATTCCTAGAAGTTCATGTAACACGCCTTTTTGCTCCGAGC
ACGGGCACCGAGGTGATATTGGATATGTTGGCCATACTATCCGATTATTT
CAAGGACTACAAAGAGGCTCTACTTGACTACCACTTCGAATATCTGGCCA
TCGAAACCTTGAAACGTGTTGTGATTTGGTATCTTGTCCCCTTTTTGCGC
TTGACACACCCCCGTCTTGATGAAAGCGTGGCACGACGATTTACATCGCT
TCCCATATTTGAAGACCAGAATGAAGATCCTGAGGACTTTTCTGAAAGTT
TAAGTAGGGTGATCAGTACAAGACGGAGTGACGCTAGTTCAAAAGTCCTT
TCATCGAGTGTGGGTTTAGCTTCCATGAGTGGAGGAGCAGTTCTGGCCCT
TGTCGAAAAAGACATCTCAAATATTTCTGCTTTCATGGAGAAACAAGTAC
CACTGCACCAAAAGAAACAGTTAAAACCTGCTTTGGAGCCGTTGCATGCC
ATTCAAGCATTGTACAAGTGTGACCCTACTGCTCCAGCTATGGCTGAGGC
GTTTCAAGATGCGAAATTTATGATCGACAGAGCTCTTCGCCCCCTTTGGG
CGATGGAATATGGAGCTCACGGTCAGTTTGGTATTAGAAATGCCGAGAAA
ATCTGGGAAACTCGGCATGAGTTGAGTCCCTCCTTAATAGTGGAAGCCAT
CAATATGACCAGAAGCAACATAGATCGCATTGAAGCTCAAACTCCCAGCA
GAATGTCAAGTGTTGATGATGGGCGTATCTGGAGCTCAAGGTACAGTGAC
CCAAATGGTTCGATTTCGGAACGTTTCATAGAAAGACAAGGGGGCTATAA
CGAGCAAAACCTTTCATCTTCTTCCTTGATGTGGACACCCAAGTCTTTCA
ACAGTAGCGTTGCTAAGAGGATGTCTGCAGAGCGGAATACTCGGCGATGA
back to topCoding sequence (CDS) from alignment at tig00000860_pilon:568852..571551+ >Ggra8865.t1 ID=Ggra8865.t1|Name=Ggra8865.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2700bp|location=Sequence derived from alignment at tig00000860_pilon:568852..571551+ (Gracilaria gracilis GNS1m male) ATGTCCGAAATACAAAAAGAAGCTATCCGCGTCGTTTCTGAAGCCATCTC CGGAGCAGATGGCAATCTTCTCCCTGTCATCGACACCGCGCATGAAAAAT GGCAAATTGAGCTACGCGACGCCAAATCCACTGCTCGCAAACTGTTAGCA GAAGTTCTGGAAGAGAGGCAAACGCTACGCAAATCATTAGCATCCGCCGC AGACCTATGGCGAACTCTTCAACCCACCCACCCTGATGACAATGTCACTG AACAACCCCAACAACCCGCACTCTCTCACGCCCACTCCTTTCCAGCCAAC GACGCCCAGCTCGCTGCCGTCAGAGCCTTGCACAATATCTCACAGACTCT GTTCTGGGCAGAGTTTACAATGGAGGCCCCGCGTGCTCTGGAACGAGCCA CCACCTTCCTCGAGAAGATTCATAGTAATGGTTTGGATAAGGTCGTCAAG GGCAACCCCGCATTACTTGTTGATGCCCATGCTAACTTAACCGCCGCTGA AAGACTACGTGACCTCATTTTACTCGAGACACCAACAGCTGAAAGCACAA ACCCCACACAATGGTTCTCCAAGGCAGTTGAAACGCGTAACCTTCTTGAA GATATCGTGCTTCGAGGTATATTCGGAAACGTCGTCCAGCTCTCCCAGGT CAATCCTTGTATCCTCGTTGCGGGTGCGCGCGTTGTAGAGAGTGAAGAGG CTGAAGATCAATGGTGGAAGAATCGCATTCAAAAAGGTGGACTTGAAGAA CGCGGCGCAGCTGTTCGTGCGTTCGGAACTCATGATTATAAGAAACGAGC GCTCAATGCTATTGTAGAGTCTTTGCAAGCACAGTTCTGGCAGAGAGAAC GCGAGCTGCGCGCATTCAAAGACACCATGACAAACGATGACATTGAAATC ACACCAAACCTTAGCAATGAAGTTCATGTGTCAAGCATTTTGGACTGGAT TCAGCAGCGACGTTCCGAGACGGAGATTGTGCGTCGTTACGTAACACCTT GCCTGCCACCGTCGTTTGAAGTTTCCCAGCTATATGAAAGTGAGCTTCAC CGGCAGTTCATGCGGCTTCTAAGTCAGATTCTTCATCTAAACAAACCTGA TGGGTCTATGTTGCTTTCTGAAACTGATCTTATAAGACTAACATCTTGGT ATAGCAAGTATAGGAATGAGGTTGACGAACAAGGAGAAACAATAGATTGC TTCCTCAGCGAAAGAGATCGAAAGCGTCTCATATCTGCTTTGCAACAACA CTGCGCTCACAGGATCACTGGCAGTATCATTTCTCGACTTTTCTCTGACG ATCGTATGGATGTTGGACTCGGCACGAAACCACACGACGTATCAAAGAGA AAGCGGCTAGGAATATCCAGAAGTGTATTATGTCGCCTAGATTTGTCACA GATTGTTATGGATTGCGTCGGTGAGCAGGTGCGAAGAATGCTGGACTTGA AGATGCGTGATTTGGACCAAGCAGTTGCTCAAGTCGTATCCGAAATCTTG CTGGATTTCCAAACAGAAGTACGGCAAGTAATCGCCAACGACAAGATTGA TACAGCTGTGGAAGAAGGTTCGTATCTCTGTGCCACGGCAAACCACATGG CCAAGTGCCTCGGGTTTTCAGAGGAATTGAGAGATTCGTTTATTCCCCTG GGTCTCGATCATCATCGACCGGAAATTGAGGAAAGAATGGAAAGCGTAAT CGATGGGTTCCGCTCAACGGCCTCAGTAGCCCTCCACGTCCTCATCGATG GAATGAGGCCATTCCTAGAAGTTCATGTAACACGCCTTTTTGCTCCGAGC ACGGGCACCGAGGTGATATTGGATATGTTGGCCATACTATCCGATTATTT CAAGGACTACAAAGAGGCTCTACTTGACTACCACTTCGAATATCTGGCCA TCGAAACCTTGAAACGTGTTGTGATTTGGTATCTTGTCCCCTTTTTGCGC TTGACACACCCCCGTCTTGATGAAAGCGTGGCACGACGATTTACATCGCT TCCCATATTTGAAGACCAGAATGAAGATCCTGAGGACTTTTCTGAAAGTT TAAGTAGGGTGATCAGTACAAGACGGAGTGACGCTAGTTCAAAAGTCCTT TCATCGAGTGTGGGTTTAGCTTCCATGAGTGGAGGAGCAGTTCTGGCCCT TGTCGAAAAAGACATCTCAAATATTTCTGCTTTCATGGAGAAACAAGTAC CACTGCACCAAAAGAAACAGTTAAAACCTGCTTTGGAGCCGTTGCATGCC ATTCAAGCATTGTACAAGTGTGACCCTACTGCTCCAGCTATGGCTGAGGC GTTTCAAGATGCGAAATTTATGATCGACAGAGCTCTTCGCCCCCTTTGGG CGATGGAATATGGAGCTCACGGTCAGTTTGGTATTAGAAATGCCGAGAAA ATCTGGGAAACTCGGCATGAGTTGAGTCCCTCCTTAATAGTGGAAGCCAT CAATATGACCAGAAGCAACATAGATCGCATTGAAGCTCAAACTCCCAGCA GAATGTCAAGTGTTGATGATGGGCGTATCTGGAGCTCAAGGTACAGTGAC CCAAATGGTTCGATTTCGGAACGTTTCATAGAAAGACAAGGGGGCTATAA CGAGCAAAACCTTTCATCTTCTTCCTTGATGTGGACACCCAAGTCTTTCA ACAGTAGCGTTGCTAAGAGGATGTCTGCAGAGCGGAATACTCGGCGATGA back to top
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