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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005703923.1 |
| PFAMs | ArsA_ATPase |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K01551 |
| KEGG TC | 3.A.19.1,3.A.21.1,3.A.4.1 |
| Evalue | 7.99e-151 |
| EggNOG OGs | COG0003@1|root,KOG2825@2759|Eukaryota |
| EC | 3.6.3.16 |
| Description | ATPase activity |
| COG category | P |
| BRITE | ko00000,ko01000,ko02000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra8839.t1.stop1 | Ggra8839.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000860_pilon 474626..474628 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra8839.t1.intron1 | Ggra8839.t1.intron1 | Gracilaria gracilis GNS1m male | intron | tig00000860_pilon 476729..477124 - |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra8839.t1.start1 | Ggra8839.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000860_pilon 477440..477442 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra8839.t1 ID=Ggra8839.t1|Name=Ggra8839.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=807bp MARVRVRRPDVNTLRLLLTLSNRHVHAQLVDKHAARVVLAAHTTEPVVRD MIDANAVRGSYATASVAAAAVVGTVFAQRARQMGISDVYWQRPGRYHGKI RAFIDAAATPSQSASVAALDNLLSSPSRRFIFVGGKGGVGKTTTAAAIAV HFANAGLSTLVLSTDPAHSLGDALRLDLSSGDVVDVPNLSLRAIEVDTSA AVAQFRHLLASLNEVPDASDDAWRRLAAKLGLSDFSAVLDTIPPGADELL ALVSVLELVESRPEYSFDRIIIDTAPTGHTLRLLSFPDFLDKFLAHALAL REKLHSARSMLGSVANMFVGKKTDLNAALTNAAKRVQAYREKMIQLSDLF RDPARAEFVVVTIATVLAVEESKRLIQHLWDDGIWVRHVVVNQVLPTADT RTVEAYLNQLRKGQTREIAFATERIADEFGLAITLVPRFDTEVRGVYGLY ALGEIAFKQSRQESYGAFFDVESRTKNGAQSQFVFVGGKGGVGKTSISAA LGVKLASEGFKTLVLSTDPAHSLADALQISLEGGAPVCIDEANGELFAME IDTEGAIKDFQKLAGDFVAEGRRGAGVDIARKLGLEEFAGLLDNAPPGID ELVALTQVMELVKFGDFDRVVVDTAPTGHTLRLLGFPEFLDNFLGKVIRL KQRLDSAIDKLRTVLGRKDNKEDVVDKASKGIQRLRDNMEELRDLVRDKS RTQFALVTVATGLAMAESERLARSLKHDEVGVKNLIINQVIGEAAAESFV KRVMENQNKCIAELRSMGGEMDIELTQVPYFDVEVRGTYGLQAMAKSLFS SAVEAD* back to topspliced messenger RNA >Ggra8839.t1 ID=Ggra8839.t1|Name=Ggra8839.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2421bp|location=Sequence derived from alignment at tig00000860_pilon:474626..477442- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCGCGCGTGAGGGTGAGAAGGCCGGACGTGAACACGCTGCGGCTGCT GCTGACGCTGTCGAACCGCCACGTGCACGCGCAGCTGGTGGACAAACACG CCGCGCGCGTGGTGCTGGCCGCGCACACCACGGAGCCGGTGGTGCGCGAC ATGATCGATGCCAACGCCGTCCGCGGCAGCTACGCCACCGCGTCCGTGGC GGCCGCCGCCGTGGTGGGCACCGTCTTTGCGCAGCGCGCGCGCCAGATGG GCATCTCGGACGTGTATTGGCAGCGGCCTGGCCGCTACCACGGCAAGATT CGCGCCTTCATTGACGCCGCTGCCACTCCGTCCCAATCCGCCTCTGTCGC CGCTCTTGACAACCTGCTGTCCTCGCCCTCTCGTCGCTTTATCTTTGTCG GTGGCAAAGGAGGTGTGGGCAAAACCACCACCGCCGCCGCTATAGCCGTG CATTTTGCCAATGCCGGTCTCTCCACCCTGGTTTTGTCTACCGACCCGGC CCACTCTCTGGGCGATGCTCTGCGCTTGGACTTGTCGTCGGGCGACGTCG TGGACGTGCCCAATTTGTCCTTGCGAGCCATTGAGGTTGATACCTCTGCT GCCGTCGCACAGTTTCGCCATTTGCTTGCCAGCTTGAATGAGGTGCCTGA TGCTAGCGATGACGCCTGGAGACGACTTGCAGCCAAGCTTGGACTGTCCG ACTTTTCAGCAGTGCTTGATACCATCCCGCCGGGCGCGGATGAGCTTTTG GCGCTTGTCAGTGTACTTGAGCTGGTTGAATCCCGCCCAGAGTATTCATT TGACCGTATTATCATCGATACTGCTCCTACTGGACATACGCTGCGCCTGC TTTCTTTCCCGGACTTTCTTGACAAGTTTCTGGCGCACGCTCTTGCTCTA CGCGAAAAGTTACACAGCGCGCGCTCCATGCTGGGCAGTGTGGCAAACAT GTTTGTTGGAAAGAAGACTGATTTGAACGCGGCGCTCACTAATGCCGCAA AAAGAGTGCAGGCGTACCGCGAAAAGATGATCCAACTCAGTGATTTGTTT CGAGATCCTGCGCGTGCCGAGTTTGTCGTTGTCACCATTGCCACCGTGCT GGCGGTTGAGGAAAGTAAGAGATTGATACAACATTTGTGGGATGATGGCA TTTGGGTTCGTCACGTTGTGGTGAACCAGGTTTTGCCAACCGCTGATACT CGCACCGTTGAAGCCTATCTGAATCAGCTTCGAAAGGGACAGACTCGCGA GATTGCTTTTGCGACGGAGCGTATTGCAGATGAATTTGGTCTGGCCATCA CTCTTGTTCCTCGCTTCGATACTGAGGTTCGCGGCGTTTATGGACTGTAC GCATTGGGTGAAATAGCGTTCAAACAGTCGCGTCAAGAGAGTTATGGCGC TTTTTTTGACGTGGAATCCCGCACAAAGAACGGAGCACAGTCACAGTTTG TGTTTGTTGGAGGCAAGGGTGGGGTTGGGAAAACTAGCATCAGCGCTGCT TTAGGGGTTAAACTAGCTTCGGAGGGTTTCAAGACACTAGTTTTGTCGAC TGACCCAGCGCATTCACTGGCAGACGCGTTGCAGATTTCCCTTGAAGGTG GGGCTCCTGTTTGTATTGATGAGGCGAACGGCGAGCTGTTTGCAATGGAG ATTGACACAGAGGGTGCTATAAAGGATTTTCAGAAGCTTGCCGGCGATTT TGTGGCGGAGGGAAGACGCGGCGCTGGGGTGGATATTGCGAGAAAGCTGG GGCTGGAGGAATTCGCTGGATTATTGGATAATGCTCCGCCAGGAATCGAT GAATTGGTAGCGCTTACTCAGGTGATGGAACTTGTGAAGTTCGGGGATTT TGATCGCGTTGTGGTTGATACGGCGCCCACGGGCCATACGCTGCGTTTGC TTGGATTCCCGGAGTTTCTGGATAACTTTCTAGGAAAGGTGATTCGATTG AAGCAGCGACTTGATTCTGCGATTGATAAGCTGAGAACTGTGCTTGGACG GAAGGATAATAAGGAAGATGTCGTGGATAAGGCTTCAAAGGGTATACAAA GATTACGAGATAACATGGAGGAATTGAGGGATTTGGTTAGAGATAAGAGT CGAACGCAGTTCGCTCTAGTGACTGTTGCGACGGGGTTGGCTATGGCGGA AAGCGAGCGGCTGGCAAGGTCTTTGAAGCATGATGAGGTTGGTGTCAAAA ACCTTATTATAAATCAGGTGATTGGAGAGGCAGCGGCTGAATCCTTTGTG AAGAGAGTTATGGAGAATCAAAACAAGTGTATTGCGGAACTGAGAAGTAT GGGAGGTGAAATGGATATTGAGTTAACCCAAGTGCCCTATTTTGATGTTG AAGTTCGAGGCACTTACGGATTGCAGGCTATGGCGAAGAGCTTGTTCTCT TCTGCTGTTGAGGCGGATTGA back to topprotein sequence of Ggra8839.t1 >Ggra8839.t1 ID=Ggra8839.t1|Name=Ggra8839.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=807bp
MARVRVRRPDVNTLRLLLTLSNRHVHAQLVDKHAARVVLAAHTTEPVVRD MIDANAVRGSYATASVAAAAVVGTVFAQRARQMGISDVYWQRPGRYHGKI RAFIDAAATPSQSASVAALDNLLSSPSRRFIFVGGKGGVGKTTTAAAIAV HFANAGLSTLVLSTDPAHSLGDALRLDLSSGDVVDVPNLSLRAIEVDTSA AVAQFRHLLASLNEVPDASDDAWRRLAAKLGLSDFSAVLDTIPPGADELL ALVSVLELVESRPEYSFDRIIIDTAPTGHTLRLLSFPDFLDKFLAHALAL REKLHSARSMLGSVANMFVGKKTDLNAALTNAAKRVQAYREKMIQLSDLF RDPARAEFVVVTIATVLAVEESKRLIQHLWDDGIWVRHVVVNQVLPTADT RTVEAYLNQLRKGQTREIAFATERIADEFGLAITLVPRFDTEVRGVYGLY ALGEIAFKQSRQESYGAFFDVESRTKNGAQSQFVFVGGKGGVGKTSISAA LGVKLASEGFKTLVLSTDPAHSLADALQISLEGGAPVCIDEANGELFAME IDTEGAIKDFQKLAGDFVAEGRRGAGVDIARKLGLEEFAGLLDNAPPGID ELVALTQVMELVKFGDFDRVVVDTAPTGHTLRLLGFPEFLDNFLGKVIRL KQRLDSAIDKLRTVLGRKDNKEDVVDKASKGIQRLRDNMEELRDLVRDKS RTQFALVTVATGLAMAESERLARSLKHDEVGVKNLIINQVIGEAAAESFV KRVMENQNKCIAELRSMGGEMDIELTQVPYFDVEVRGTYGLQAMAKSLFS SAVEAD* back to topmRNA from alignment at tig00000860_pilon:474626..477442- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra8839.t1 ID=Ggra8839.t1|Name=Ggra8839.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2817bp|location=Sequence derived from alignment at tig00000860_pilon:474626..477442- (Gracilaria gracilis GNS1m male) ATGGCGCGCGTGAGGGTGAGAAGGCCGGACGTGAACACGCTGCGGCTGCT
GCTGACGCTGTCGAACCGCCACGTGCACGCGCAGCTGGTGGACAAACACG
CCGCGCGCGTGGTGCTGGCCGCGCACACCACGGAGCCGGTGGTGCGCGAC
ATGATCGATGCCAACGCCGTCCGCGGCAGCTACGCCACCGCGTCCGTGGC
GGCCGCCGCCGTGGTGGGCACCGTCTTTGCGCAGCGCGCGCGCCAGATGG
GCATCTCGGACGTGTATTGGCAGCGGCCTGGCCGCTACCACGGCAAGATT
CGCGCCTTCATTGACGCCGTCCGCCACGGCGGCGTCAGTACCCGCCGCTC
GCCCTCGTATGAAATGCCGCCCGTTCCACCGTTGAACAAATGCTGAACGG
TTCTTCACGAATAAAAACCTGTCCCATTTTTGCATCTTCCGCCGCTTCGA
TCTCGCCCTCGCGTCTTGCTCAATCTATCTAGTCTACCTTCGTACTTAGA
TCCGCGCCGCACCTCCTTCCGTCGTCCTACTCGCTCCGTTCCGCCGTCCG
TCATGACCCGTGTACAGGCGTTCGTCGCCCCGCTTCCAATAATCACCTAC
AATTCATCCGCTCGCCTGTCACGCCTACGCACAACCGCCCGTCCGTCCCC
GCCGCTACGTCGCCGCCCGCGCCCAGTTCGCCTGCCCATCGCCACCGCCA
CCCCGCCCGCCCAGGCTGCCACTCCGTCCCAATCCGCCTCTGTCGCCGCT
CTTGACAACCTGCTGTCCTCGCCCTCTCGTCGCTTTATCTTTGTCGGTGG
CAAAGGAGGTGTGGGCAAAACCACCACCGCCGCCGCTATAGCCGTGCATT
TTGCCAATGCCGGTCTCTCCACCCTGGTTTTGTCTACCGACCCGGCCCAC
TCTCTGGGCGATGCTCTGCGCTTGGACTTGTCGTCGGGCGACGTCGTGGA
CGTGCCCAATTTGTCCTTGCGAGCCATTGAGGTTGATACCTCTGCTGCCG
TCGCACAGTTTCGCCATTTGCTTGCCAGCTTGAATGAGGTGCCTGATGCT
AGCGATGACGCCTGGAGACGACTTGCAGCCAAGCTTGGACTGTCCGACTT
TTCAGCAGTGCTTGATACCATCCCGCCGGGCGCGGATGAGCTTTTGGCGC
TTGTCAGTGTACTTGAGCTGGTTGAATCCCGCCCAGAGTATTCATTTGAC
CGTATTATCATCGATACTGCTCCTACTGGACATACGCTGCGCCTGCTTTC
TTTCCCGGACTTTCTTGACAAGTTTCTGGCGCACGCTCTTGCTCTACGCG
AAAAGTTACACAGCGCGCGCTCCATGCTGGGCAGTGTGGCAAACATGTTT
GTTGGAAAGAAGACTGATTTGAACGCGGCGCTCACTAATGCCGCAAAAAG
AGTGCAGGCGTACCGCGAAAAGATGATCCAACTCAGTGATTTGTTTCGAG
ATCCTGCGCGTGCCGAGTTTGTCGTTGTCACCATTGCCACCGTGCTGGCG
GTTGAGGAAAGTAAGAGATTGATACAACATTTGTGGGATGATGGCATTTG
GGTTCGTCACGTTGTGGTGAACCAGGTTTTGCCAACCGCTGATACTCGCA
CCGTTGAAGCCTATCTGAATCAGCTTCGAAAGGGACAGACTCGCGAGATT
GCTTTTGCGACGGAGCGTATTGCAGATGAATTTGGTCTGGCCATCACTCT
TGTTCCTCGCTTCGATACTGAGGTTCGCGGCGTTTATGGACTGTACGCAT
TGGGTGAAATAGCGTTCAAACAGTCGCGTCAAGAGAGTTATGGCGCTTTT
TTTGACGTGGAATCCCGCACAAAGAACGGAGCACAGTCACAGTTTGTGTT
TGTTGGAGGCAAGGGTGGGGTTGGGAAAACTAGCATCAGCGCTGCTTTAG
GGGTTAAACTAGCTTCGGAGGGTTTCAAGACACTAGTTTTGTCGACTGAC
CCAGCGCATTCACTGGCAGACGCGTTGCAGATTTCCCTTGAAGGTGGGGC
TCCTGTTTGTATTGATGAGGCGAACGGCGAGCTGTTTGCAATGGAGATTG
ACACAGAGGGTGCTATAAAGGATTTTCAGAAGCTTGCCGGCGATTTTGTG
GCGGAGGGAAGACGCGGCGCTGGGGTGGATATTGCGAGAAAGCTGGGGCT
GGAGGAATTCGCTGGATTATTGGATAATGCTCCGCCAGGAATCGATGAAT
TGGTAGCGCTTACTCAGGTGATGGAACTTGTGAAGTTCGGGGATTTTGAT
CGCGTTGTGGTTGATACGGCGCCCACGGGCCATACGCTGCGTTTGCTTGG
ATTCCCGGAGTTTCTGGATAACTTTCTAGGAAAGGTGATTCGATTGAAGC
AGCGACTTGATTCTGCGATTGATAAGCTGAGAACTGTGCTTGGACGGAAG
GATAATAAGGAAGATGTCGTGGATAAGGCTTCAAAGGGTATACAAAGATT
ACGAGATAACATGGAGGAATTGAGGGATTTGGTTAGAGATAAGAGTCGAA
CGCAGTTCGCTCTAGTGACTGTTGCGACGGGGTTGGCTATGGCGGAAAGC
GAGCGGCTGGCAAGGTCTTTGAAGCATGATGAGGTTGGTGTCAAAAACCT
TATTATAAATCAGGTGATTGGAGAGGCAGCGGCTGAATCCTTTGTGAAGA
GAGTTATGGAGAATCAAAACAAGTGTATTGCGGAACTGAGAAGTATGGGA
GGTGAAATGGATATTGAGTTAACCCAAGTGCCCTATTTTGATGTTGAAGT
TCGAGGCACTTACGGATTGCAGGCTATGGCGAAGAGCTTGTTCTCTTCTG
CTGTTGAGGCGGATTGA back to topCoding sequence (CDS) from alignment at tig00000860_pilon:474626..477442- >Ggra8839.t1 ID=Ggra8839.t1|Name=Ggra8839.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2421bp|location=Sequence derived from alignment at tig00000860_pilon:474626..477442- (Gracilaria gracilis GNS1m male) ATGGCGCGCGTGAGGGTGAGAAGGCCGGACGTGAACACGCTGCGGCTGCT GCTGACGCTGTCGAACCGCCACGTGCACGCGCAGCTGGTGGACAAACACG CCGCGCGCGTGGTGCTGGCCGCGCACACCACGGAGCCGGTGGTGCGCGAC ATGATCGATGCCAACGCCGTCCGCGGCAGCTACGCCACCGCGTCCGTGGC GGCCGCCGCCGTGGTGGGCACCGTCTTTGCGCAGCGCGCGCGCCAGATGG GCATCTCGGACGTGTATTGGCAGCGGCCTGGCCGCTACCACGGCAAGATT CGCGCCTTCATTGACGCCGCTGCCACTCCGTCCCAATCCGCCTCTGTCGC CGCTCTTGACAACCTGCTGTCCTCGCCCTCTCGTCGCTTTATCTTTGTCG GTGGCAAAGGAGGTGTGGGCAAAACCACCACCGCCGCCGCTATAGCCGTG CATTTTGCCAATGCCGGTCTCTCCACCCTGGTTTTGTCTACCGACCCGGC CCACTCTCTGGGCGATGCTCTGCGCTTGGACTTGTCGTCGGGCGACGTCG TGGACGTGCCCAATTTGTCCTTGCGAGCCATTGAGGTTGATACCTCTGCT GCCGTCGCACAGTTTCGCCATTTGCTTGCCAGCTTGAATGAGGTGCCTGA TGCTAGCGATGACGCCTGGAGACGACTTGCAGCCAAGCTTGGACTGTCCG ACTTTTCAGCAGTGCTTGATACCATCCCGCCGGGCGCGGATGAGCTTTTG GCGCTTGTCAGTGTACTTGAGCTGGTTGAATCCCGCCCAGAGTATTCATT TGACCGTATTATCATCGATACTGCTCCTACTGGACATACGCTGCGCCTGC TTTCTTTCCCGGACTTTCTTGACAAGTTTCTGGCGCACGCTCTTGCTCTA CGCGAAAAGTTACACAGCGCGCGCTCCATGCTGGGCAGTGTGGCAAACAT GTTTGTTGGAAAGAAGACTGATTTGAACGCGGCGCTCACTAATGCCGCAA AAAGAGTGCAGGCGTACCGCGAAAAGATGATCCAACTCAGTGATTTGTTT CGAGATCCTGCGCGTGCCGAGTTTGTCGTTGTCACCATTGCCACCGTGCT GGCGGTTGAGGAAAGTAAGAGATTGATACAACATTTGTGGGATGATGGCA TTTGGGTTCGTCACGTTGTGGTGAACCAGGTTTTGCCAACCGCTGATACT CGCACCGTTGAAGCCTATCTGAATCAGCTTCGAAAGGGACAGACTCGCGA GATTGCTTTTGCGACGGAGCGTATTGCAGATGAATTTGGTCTGGCCATCA CTCTTGTTCCTCGCTTCGATACTGAGGTTCGCGGCGTTTATGGACTGTAC GCATTGGGTGAAATAGCGTTCAAACAGTCGCGTCAAGAGAGTTATGGCGC TTTTTTTGACGTGGAATCCCGCACAAAGAACGGAGCACAGTCACAGTTTG TGTTTGTTGGAGGCAAGGGTGGGGTTGGGAAAACTAGCATCAGCGCTGCT TTAGGGGTTAAACTAGCTTCGGAGGGTTTCAAGACACTAGTTTTGTCGAC TGACCCAGCGCATTCACTGGCAGACGCGTTGCAGATTTCCCTTGAAGGTG GGGCTCCTGTTTGTATTGATGAGGCGAACGGCGAGCTGTTTGCAATGGAG ATTGACACAGAGGGTGCTATAAAGGATTTTCAGAAGCTTGCCGGCGATTT TGTGGCGGAGGGAAGACGCGGCGCTGGGGTGGATATTGCGAGAAAGCTGG GGCTGGAGGAATTCGCTGGATTATTGGATAATGCTCCGCCAGGAATCGAT GAATTGGTAGCGCTTACTCAGGTGATGGAACTTGTGAAGTTCGGGGATTT TGATCGCGTTGTGGTTGATACGGCGCCCACGGGCCATACGCTGCGTTTGC TTGGATTCCCGGAGTTTCTGGATAACTTTCTAGGAAAGGTGATTCGATTG AAGCAGCGACTTGATTCTGCGATTGATAAGCTGAGAACTGTGCTTGGACG GAAGGATAATAAGGAAGATGTCGTGGATAAGGCTTCAAAGGGTATACAAA GATTACGAGATAACATGGAGGAATTGAGGGATTTGGTTAGAGATAAGAGT CGAACGCAGTTCGCTCTAGTGACTGTTGCGACGGGGTTGGCTATGGCGGA AAGCGAGCGGCTGGCAAGGTCTTTGAAGCATGATGAGGTTGGTGTCAAAA ACCTTATTATAAATCAGGTGATTGGAGAGGCAGCGGCTGAATCCTTTGTG AAGAGAGTTATGGAGAATCAAAACAAGTGTATTGCGGAACTGAGAAGTAT GGGAGGTGAAATGGATATTGAGTTAACCCAAGTGCCCTATTTTGATGTTG AAGTTCGAGGCACTTACGGATTGCAGGCTATGGCGAAGAGCTTGTTCTCT TCTGCTGTTGAGGCGGATTGA back to top
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