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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 72019.SARC_05368T0 |
| PFAMs | ABC_membrane,ABC_tran |
| Max annot lvl | 33154|Opisthokonta |
| KEGG ko | ko:K05658 |
| KEGG TC | 3.A.1.201 |
| KEGG Pathway | ko02010,ko04976,ko05206,ko05226,map02010,map04976,map05206,map05226 |
| Evalue | 3.95e-121 |
| EggNOG OGs | COG1132@1|root,KOG0055@2759|Eukaryota,38E88@33154|Opisthokonta |
| EC | 3.6.3.44 |
| Description | ATPase activity, coupled to transmembrane movement of substances |
| COG category | Q |
| BRITE | ko00000,ko00001,ko01000,ko02000,ko04090,ko04147 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra8819.t1.start1 | Ggra8819.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000860_pilon 230742..230744 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra8819.t1.stop1 | Ggra8819.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000860_pilon 234707..234709 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra8819.t1 ID=Ggra8819.t1|Name=Ggra8819.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=744bp MDVENQSSVSPSSDAVSDAPSSFKGRIKAMFAKKEKEEKKTLPFRELFAY ATRAELRYMFISVPAAAVHGCILPLFTIVFGDVIDAFGGTDDTGEGAVNV NEITSTVGGIAKWFLVLAAVAFVSSFLQVRFQLIFAHRVTNRLRRLYFQS LMRQDYSWYDSNDGGELTARVAGDVNLIQAGIGEKVATAVQFIVTFITGF IIAFIYGWKLTLIILAISPLLALEDPTKATSLSKTRVEEEEEVELPPVDR GVLGRALKMSIPEIPYILVGMFGAAVAGASFPAMAITFTEVIEVTLRENN VDDVSFWSWMFVLIGGLAFVGYFLQHTMLGISGERLTRKLRSKAFRSVLR QDIGFFDNKKNSVGQLTTRLATEATLVKGVAGDALGGIAMVTSTLLTGFL IAFLSCWRVALVVTVIFPAMGLSEAMNIKMISGFDSDSNKKFAKAGAVAS EAVDNFDTVSSIGVQDVFIDKYNEELEVPLRNGRRSAFTSGIAYGVAEAL AQILWAISFWVGSIFVQRGQCTFEGLMKAVSGLLFAGSSLGQASLFLPDF GKSRVAATELFRLLDRTSAIDPTSEEGMRIGGKAIDGAVATKGVKFEYPT RPDVPVLRGLTVDVEPGKTLALVGASGSGKSTVVALIERFYDPRSGKLDI DGIDIKDYHLRDIRGQIGLVSQEPDLFHRSVRDNIAYGLSQEDGTPVTES MIDADVIGVVQNGKIVEKGTHQELLNLNGAYARLVENQMSEAS* back to topspliced messenger RNA >Ggra8819.t1 ID=Ggra8819.t1|Name=Ggra8819.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2232bp|location=Sequence derived from alignment at tig00000860_pilon:230742..234709+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGATGTTGAGAATCAAAGTTCGGTGTCTCCTTCTTCTGATGCGGTCTC AGATGCTCCGTCTTCATTCAAGGGCCGCATCAAGGCAATGTTTGCTAAAA AGGAGAAAGAAGAAAAGAAGACGCTCCCGTTTAGAGAACTGTTTGCTTAT GCCACGCGCGCCGAGCTGCGATACATGTTCATCTCTGTTCCCGCAGCTGC TGTGCATGGTTGCATTCTACCTTTGTTCACCATTGTTTTCGGTGATGTCA TCGATGCGTTTGGTGGCACGGATGACACTGGCGAGGGTGCCGTTAACGTC AATGAAATTACCTCAACTGTTGGTGGTATTGCCAAATGGTTCCTTGTTCT AGCTGCCGTTGCGTTTGTTTCAAGCTTCCTTCAAGTTCGCTTTCAGCTCA TATTTGCGCATCGCGTTACCAATCGTCTGCGTCGGCTTTACTTTCAGTCG CTCATGAGGCAGGACTACTCGTGGTATGATTCGAATGATGGAGGTGAGCT CACCGCCCGTGTTGCTGGCGATGTCAATCTCATTCAAGCTGGCATTGGAG AAAAGGTAGCGACCGCTGTTCAGTTTATCGTCACTTTCATCACAGGCTTC ATCATCGCTTTTATTTATGGCTGGAAGCTTACGCTTATCATCCTTGCCAT TTCACCGTTGCTTGCGCTTGAGGACCCCACTAAGGCCACATCTCTGTCTA AGACCCGTGTCGAAGAAGAAGAAGAAGTCGAGCTTCCGCCAGTTGACCGC GGGGTGTTGGGTCGAGCACTTAAGATGAGTATTCCTGAGATTCCATATAT ATTGGTCGGTATGTTTGGAGCGGCGGTCGCAGGAGCATCATTCCCGGCTA TGGCCATTACATTTACAGAGGTCATTGAGGTTACGCTGAGGGAAAACAAC GTCGACGATGTCAGCTTCTGGTCATGGATGTTTGTTCTGATTGGAGGACT TGCATTCGTCGGATATTTTCTGCAGCATACTATGCTTGGGATCAGTGGAG AGAGGCTTACCCGAAAGCTTCGCTCGAAAGCTTTCCGCTCCGTTCTTCGA CAAGATATTGGTTTCTTTGATAACAAGAAGAACTCTGTTGGTCAACTGAC TACTCGTCTCGCAACTGAGGCAACGCTCGTGAAGGGTGTGGCTGGAGATG CGCTCGGCGGAATTGCCATGGTAACCAGCACCTTGTTGACTGGTTTTCTG ATCGCTTTCTTATCCTGCTGGCGGGTGGCGCTTGTTGTCACCGTAATCTT TCCAGCTATGGGGCTATCTGAAGCAATGAACATTAAGATGATATCTGGTT TTGACTCAGACTCCAATAAGAAGTTTGCGAAGGCCGGTGCAGTTGCTTCT GAAGCTGTTGACAATTTCGACACAGTGAGCTCTATTGGCGTGCAAGATGT GTTCATCGACAAGTACAACGAAGAGCTGGAAGTCCCGCTACGAAATGGTC GTCGATCCGCTTTCACTTCTGGTATTGCATACGGCGTAGCCGAGGCCTTA GCACAGATTCTGTGGGCTATTTCGTTCTGGGTTGGTTCAATTTTCGTACA ACGCGGGCAGTGCACATTCGAAGGTCTCATGAAGGCCGTGAGTGGATTGT TGTTTGCTGGTTCCTCTCTTGGTCAGGCCTCTCTGTTTCTGCCTGACTTC GGGAAGTCTCGCGTGGCAGCCACAGAACTGTTCCGTCTGTTAGATCGTAC GTCTGCGATTGATCCGACGTCTGAGGAAGGCATGAGAATTGGTGGCAAGG CTATTGATGGCGCTGTTGCCACGAAGGGAGTCAAGTTCGAATACCCAACT CGTCCTGATGTTCCAGTACTACGTGGACTTACTGTTGACGTGGAGCCTGG AAAGACCTTGGCTTTGGTGGGTGCATCCGGAAGCGGTAAGTCAACTGTCG TGGCTTTGATTGAGCGATTCTATGATCCCCGTTCTGGTAAGCTCGACATC GACGGCATTGATATCAAAGATTATCACTTGAGGGATATTCGCGGTCAGAT TGGGTTAGTCTCACAAGAACCGGATCTATTTCATCGATCTGTACGCGACA ATATCGCATACGGTTTGAGCCAGGAGGATGGTACACCCGTGACTGAATCA ATGATTGACGCCGATGTGATTGGAGTGGTGCAGAATGGAAAGATTGTTGA GAAGGGAACTCATCAAGAACTGCTCAATTTGAACGGAGCTTACGCTAGGC TTGTTGAGAATCAGATGAGTGAAGCTTCATGA back to topprotein sequence of Ggra8819.t1 >Ggra8819.t1 ID=Ggra8819.t1|Name=Ggra8819.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=744bp
MDVENQSSVSPSSDAVSDAPSSFKGRIKAMFAKKEKEEKKTLPFRELFAY ATRAELRYMFISVPAAAVHGCILPLFTIVFGDVIDAFGGTDDTGEGAVNV NEITSTVGGIAKWFLVLAAVAFVSSFLQVRFQLIFAHRVTNRLRRLYFQS LMRQDYSWYDSNDGGELTARVAGDVNLIQAGIGEKVATAVQFIVTFITGF IIAFIYGWKLTLIILAISPLLALEDPTKATSLSKTRVEEEEEVELPPVDR GVLGRALKMSIPEIPYILVGMFGAAVAGASFPAMAITFTEVIEVTLRENN VDDVSFWSWMFVLIGGLAFVGYFLQHTMLGISGERLTRKLRSKAFRSVLR QDIGFFDNKKNSVGQLTTRLATEATLVKGVAGDALGGIAMVTSTLLTGFL IAFLSCWRVALVVTVIFPAMGLSEAMNIKMISGFDSDSNKKFAKAGAVAS EAVDNFDTVSSIGVQDVFIDKYNEELEVPLRNGRRSAFTSGIAYGVAEAL AQILWAISFWVGSIFVQRGQCTFEGLMKAVSGLLFAGSSLGQASLFLPDF GKSRVAATELFRLLDRTSAIDPTSEEGMRIGGKAIDGAVATKGVKFEYPT RPDVPVLRGLTVDVEPGKTLALVGASGSGKSTVVALIERFYDPRSGKLDI DGIDIKDYHLRDIRGQIGLVSQEPDLFHRSVRDNIAYGLSQEDGTPVTES MIDADVIGVVQNGKIVEKGTHQELLNLNGAYARLVENQMSEAS* back to topmRNA from alignment at tig00000860_pilon:230742..234709+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra8819.t1 ID=Ggra8819.t1|Name=Ggra8819.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=3968bp|location=Sequence derived from alignment at tig00000860_pilon:230742..234709+ (Gracilaria gracilis GNS1m male) ATGGATGTTGAGAATCAAAGTTCGGTGTCTCCTTCTTCTGATGCGGTCTC
AGATGCTCCGTCTTCATTCAAGGGCCGCATCAAGGCAATGTTTGCTAAAA
AGGAGAAAGAAGAAAAGAAGACGCTCCCGTTTAGAGAACTGTTTGCTTAT
GCCACGCGCGCCGAGCTGCGATACATGTTCATCTCTGTTCCCGCAGCTGC
TGTGCATGGTTGCATTCTACCTTTGTTCACCATTGTTTTCGGTGATGTCA
TCGATGCGTTTGGTGGCACGGATGACACTGGCGAGGGTGCCGTTAACGTC
AATGAAATTACCTCAACTGTTGGTGGTATTGCCAAATGGTTCCTTGTTCT
AGCTGCCGTTGCGTTTGTTTCAAGCTTCCTTCAAGTTCGCTTTCAGCTCA
TATTTGCGCATCGCGTTACCAATCGTCTGCGTCGGCTTTACTTTCAGTCG
CTCATGAGGCAGGACTACTCGTGGTATGATTCGAATGATGGAGGTGAGCT
CACCGCCCGTGTTGCTGGCGATGTCAATCTCATTCAAGCTGGCATTGGAG
AAAAGGTAGCGACCGCTGTTCAGTTTATCGTCACTTTCATCACAGGCTTC
ATCATCGCTTTTATTTATGGCTGGAAGCTTACGCTTATCATCCTTGCCAT
TTCACCGTTGCTTGCGCTTGGTGGCGTCCtgtttggcaagcttgcagcgg
aaagctcgagcgatacgcaaaaatcgtacggcgctgctggtgcagtggct
tccgaagtcctttccttgattcgtactgtcaccgcatacaatggccagga
aagcgaagcaaagcgatatgacgagaagctacaggaggcctaTCGCTTTG
GTGTTAAACGTTCAGCGTACAGCGGCGGCGCTCTTGGTTTCACGTACGGT
GTTATCTTCTGCACGTTTGCTGTTGCGTTTTCGTTTGGTGCGAGTCAAGT
GCGATCGGGAGCTATGGATCCAGGTGATATTATCGTCaccttcttcagtg
ttttcattgctactatttcgatcggtcaggcttctccgtcgttcactgcg
tttaatattgctcgaggtgcggcgccccgtgtctatgacgttattagacg
aaagagtgagattgatccgcttgaggatgaaggaagagtgctggataata
taaccggtgaacttaacttccgcgacgtgcagttcaactatcctactcgt
gctgtggacgatttggagagtgaagcacgtccgcatgtgctcgacaagtt
caacctcaaggtttctcccggttctagtcatgcacttgttgggtcttcag
gatgtggtaagagtacgacagtgcgtctcattgagcgcttttatgacgtg
caggaaggccaggtactcattgatggggttgacgttcgtgacctgaacgt
acggtggttgcgaagtcaaattggttatgttggtcagatgccaacccttt
tcatgctttctatccgggagaacatcgctcttggcgctgctatggagaaa
gttgttgacccgaaaacaggtgaggctactctgcaaagaaaagaagtgac
tgaagaagaaattgtggctgcagcgaagaaagccaatgcacacgatttca
tcatgaagcttccggagaagtatgacacggttctcggagagcgtggagca
atgctgtccggaggccagaagcaacgtgtgtgtatcgcaagggcgcttgt
tcgaaacccgaagattcttcttcttgacgagtccaccagtgcacttgacg
cccagtcagaaaggattgtgcaggaggctctggaacaagctgccgaagga
cgtacaaccgtcacgattgcccacagactgagcacagttaagaacgccaa
tgttatatctgtcatcgatcatgggaaggttatcgaagaaggcactcatc
gagatctgttggatattgaaggaggtgcgtacagaacattggttgagttc
cagaacgtggagggaaagaaggagaaagaggaggaagacgaagACTCTTC
TACAGTACTACAAACTGCCGCAGAGGACCCCACTAAGGCCACATCTCTGT
CTAAGACCCGTGTCGAAGAAGAAGAAGAAGTCGAGCTTCCGCCAGTTGAC
CGCGGGGTGTTGGGTCGAGCACTTAAGATGAGTATTCCTGAGATTCCATA
TATATTGGTCGGTATGTTTGGAGCGGCGGTCGCAGGAGCATCATTCCCGG
CTATGGCCATTACATTTACAGAGGTAAGTAGCTCGTCTTGGTGTCTTCAG
CATGTCGTCAATAGTCTTCGGCATTCATTCTTGTGACATATGCTAACCAC
ATTCCGATACTATGTTCCCATCATTAGGTCATTGAGGTTACGCTGAGGGA
AAACAACGTCGACGATGTCAGCTTCTGGTCATGGATGTTTGTTCTGATTG
GAGGACTTGCATTCGTCGGATATTTTCTGCAGCATACTATGCTTGGGATC
AGTGGAGAGAGGCTTACCCGAAAGCTTCGCTCGAAAGCTTTCCGCTCCGT
TCTTCGACAAGATATTGGTTTCTTTGATAACAAGAAGAACTCTGTTGGTC
AACTGACTACTCGTCTCGCAACTGAGGCAACGCTCGTGAAGGGTGTGGCT
GGAGATGCGCTCGGCGGAATTGCCATGGTAACCAGCACCTTGTTGACTGG
TTTTCTGATCGCTTTCTTATCCTGCTGGCGGGTGGCGCTTGTTGTCACCG
TAATCTTTCCAGCTATGGGGCTATCTGAAGCAATGAACATTAAGATGATA
TCTGGTTTTGACTCAGACTCCAATAAGAAGTTTGCGAAGGCCGGTGCAGT
TGCTTCTGAAGCTGTTGACAATTTCGACACAGTGAGCTCTATTGGCGTGC
AAGATGTGTTCATCGACAAGTACAACGAAGAGCTGGAAGTCCCGCTACGA
AATGGTCGTCGATCCGCTTTCACTTCTGGTATTGCATACGGCGTAGCCGA
GGCCTTAGCACAGATTCTGTGGGCTATTTCGTTCTGGGTTGGTTCAATTT
TCGTACAACGCGGGCAGTGCACATTCGAAGGTCTCATGAAGGCCGTGAGT
GGATTGTTGTTTGCTGGTTCCTCTCTTGGTCAGGCCTCTCTGTTTCTGCC
TGACTTCGGGAAGTCTCGCGTGGCAGCCACAGAACTGTTCCGTCTGTTAG
ATCGTACGTCTGCGATTGATCCGACGTCTGAGGAAGGCATGAGAATTGGT
GGCAAGGCTATTGATGGCGCTGTTGCCACGAAGGGAGTCAAGTTCGAATA
CCCAACTCGTCCTGATGTTCCAGTACTACGTGGACTTACTGTTGACGTGG
AGCCTGGAAAGACCTTGGCTTTGGTGGGTGCATCCGGAAGCGGTAAGTCA
ACTGTCGTGGCTTTGATTGAGCGATTCTATGATCCCCGTTCTGGTAAGCT
CGACATCGACGGCATTGATATCAAAGATTATCACTTGAGGGATATTCGCG
GTCAGATTGGGTTAGTCTCACAAGAACCGGATCTATTTCATCGATCTGTA
CGCGACAATATCGCATACGGTTTGAGCCAGGAGGATGGTACACCCGTGAC
TGAATCAATGATTGTAGACGCTGCCAAGGCTGCCAACGCACATGATttca
tttcggaactgcccgaaggatatgacacagacgttggaagcagaggaagc
aagctttctggtggtcagcgacaacgtgttgccattgcgcgtagtctcgt
acgttcgccgcgagtgcttttgttggacgaagcgactagtgctttggacg
cagtttctgagcgcacagttcaggatgccctagattctgcgtctcatggg
cgtactactattgcaattgcacatcgtttGTCGACGATTAAGGACGCCGA
TGTGATTGGAGTGGTGCAGAATGGAAAGATTGTTGAGAAGGGAACTCATC
AAGAACTGCTCAATTTGAACGGAGCTTACGCTAGGCTTGTTGAGAATCAG
ATGAGTGAAGCTTCATGA back to topCoding sequence (CDS) from alignment at tig00000860_pilon:230742..234709+ >Ggra8819.t1 ID=Ggra8819.t1|Name=Ggra8819.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2232bp|location=Sequence derived from alignment at tig00000860_pilon:230742..234709+ (Gracilaria gracilis GNS1m male) ATGGATGTTGAGAATCAAAGTTCGGTGTCTCCTTCTTCTGATGCGGTCTC AGATGCTCCGTCTTCATTCAAGGGCCGCATCAAGGCAATGTTTGCTAAAA AGGAGAAAGAAGAAAAGAAGACGCTCCCGTTTAGAGAACTGTTTGCTTAT GCCACGCGCGCCGAGCTGCGATACATGTTCATCTCTGTTCCCGCAGCTGC TGTGCATGGTTGCATTCTACCTTTGTTCACCATTGTTTTCGGTGATGTCA TCGATGCGTTTGGTGGCACGGATGACACTGGCGAGGGTGCCGTTAACGTC AATGAAATTACCTCAACTGTTGGTGGTATTGCCAAATGGTTCCTTGTTCT AGCTGCCGTTGCGTTTGTTTCAAGCTTCCTTCAAGTTCGCTTTCAGCTCA TATTTGCGCATCGCGTTACCAATCGTCTGCGTCGGCTTTACTTTCAGTCG CTCATGAGGCAGGACTACTCGTGGTATGATTCGAATGATGGAGGTGAGCT CACCGCCCGTGTTGCTGGCGATGTCAATCTCATTCAAGCTGGCATTGGAG AAAAGGTAGCGACCGCTGTTCAGTTTATCGTCACTTTCATCACAGGCTTC ATCATCGCTTTTATTTATGGCTGGAAGCTTACGCTTATCATCCTTGCCAT TTCACCGTTGCTTGCGCTTGAGGACCCCACTAAGGCCACATCTCTGTCTA AGACCCGTGTCGAAGAAGAAGAAGAAGTCGAGCTTCCGCCAGTTGACCGC GGGGTGTTGGGTCGAGCACTTAAGATGAGTATTCCTGAGATTCCATATAT ATTGGTCGGTATGTTTGGAGCGGCGGTCGCAGGAGCATCATTCCCGGCTA TGGCCATTACATTTACAGAGGTCATTGAGGTTACGCTGAGGGAAAACAAC GTCGACGATGTCAGCTTCTGGTCATGGATGTTTGTTCTGATTGGAGGACT TGCATTCGTCGGATATTTTCTGCAGCATACTATGCTTGGGATCAGTGGAG AGAGGCTTACCCGAAAGCTTCGCTCGAAAGCTTTCCGCTCCGTTCTTCGA CAAGATATTGGTTTCTTTGATAACAAGAAGAACTCTGTTGGTCAACTGAC TACTCGTCTCGCAACTGAGGCAACGCTCGTGAAGGGTGTGGCTGGAGATG CGCTCGGCGGAATTGCCATGGTAACCAGCACCTTGTTGACTGGTTTTCTG ATCGCTTTCTTATCCTGCTGGCGGGTGGCGCTTGTTGTCACCGTAATCTT TCCAGCTATGGGGCTATCTGAAGCAATGAACATTAAGATGATATCTGGTT TTGACTCAGACTCCAATAAGAAGTTTGCGAAGGCCGGTGCAGTTGCTTCT GAAGCTGTTGACAATTTCGACACAGTGAGCTCTATTGGCGTGCAAGATGT GTTCATCGACAAGTACAACGAAGAGCTGGAAGTCCCGCTACGAAATGGTC GTCGATCCGCTTTCACTTCTGGTATTGCATACGGCGTAGCCGAGGCCTTA GCACAGATTCTGTGGGCTATTTCGTTCTGGGTTGGTTCAATTTTCGTACA ACGCGGGCAGTGCACATTCGAAGGTCTCATGAAGGCCGTGAGTGGATTGT TGTTTGCTGGTTCCTCTCTTGGTCAGGCCTCTCTGTTTCTGCCTGACTTC GGGAAGTCTCGCGTGGCAGCCACAGAACTGTTCCGTCTGTTAGATCGTAC GTCTGCGATTGATCCGACGTCTGAGGAAGGCATGAGAATTGGTGGCAAGG CTATTGATGGCGCTGTTGCCACGAAGGGAGTCAAGTTCGAATACCCAACT CGTCCTGATGTTCCAGTACTACGTGGACTTACTGTTGACGTGGAGCCTGG AAAGACCTTGGCTTTGGTGGGTGCATCCGGAAGCGGTAAGTCAACTGTCG TGGCTTTGATTGAGCGATTCTATGATCCCCGTTCTGGTAAGCTCGACATC GACGGCATTGATATCAAAGATTATCACTTGAGGGATATTCGCGGTCAGAT TGGGTTAGTCTCACAAGAACCGGATCTATTTCATCGATCTGTACGCGACA ATATCGCATACGGTTTGAGCCAGGAGGATGGTACACCCGTGACTGAATCA ATGATTGACGCCGATGTGATTGGAGTGGTGCAGAATGGAAAGATTGTTGA GAAGGGAACTCATCAAGAACTGCTCAATTTGAACGGAGCTTACGCTAGGC TTGTTGAGAATCAGATGAGTGAAGCTTCATGA back to top
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