Ggra8774.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8774.t1
Unique NameGgra8774.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length332
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:88722..89717 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8774Ggra8774Gracilaria gracilis GNS1m malegenetig00000860_pilon 88722..89717 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8774.t1.start1Ggra8774.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000860_pilon 88722..88724 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8774.t1.CDS1Ggra8774.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000860_pilon 88722..89717 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8774.t1.exon1Ggra8774.t1.exon1Gracilaria gracilis GNS1m maleexontig00000860_pilon 88722..89717 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8774.t1.stop1Ggra8774.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000860_pilon 89715..89717 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8774.t1Ggra8774.t1Gracilaria gracilis GNS1m malepolypeptidetig00000860_pilon 88722..89717 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8774.t1 ID=Ggra8774.t1|Name=Ggra8774.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=332bp
MLASLASASDNTRSAVIEALSTRSQRADAADKVQAWLRELANKPEGDVFP
NGLTQRQMCVGLASQLLDALLSLPQFERVGYVRLHSSDARIEATIARVAS
VPVTLARAALQKFGGADAAVAALLDGWRPQIGKRAEKHESANRTVDSHQV
QRRIARDDARRQAEEEREASTGLAELAIQTAGGGERAGSSSQCAIDDVDQ
YADMGDDVPLEGGVSHYLARDDHESLEIDFPPLSYNNNGRSLKRGGASSS
TSTARRQRGKRGGRQEDRNAQSAGQNRSREASDEGRDSARADASSGRGGG
RGRGRGRGRGRGRGRGANHGRRTRAVKKQGG*
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spliced messenger RNA

>Ggra8774.t1 ID=Ggra8774.t1|Name=Ggra8774.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=996bp|location=Sequence derived from alignment at tig00000860_pilon:88722..89717+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTGCTTCTCTTGCGTCAGCAAGCGACAACACTCGTTCCGCAGTAAT
AGAAGCTCTATCCACCCGCTCACAAAGAGCCGATGCTGCAGACAAGGTGC
AAGCGTGGCTACGAGAACTGGCAAACAAACCCGAGGGCGATGTATTCCCA
AACGGTTTAACGCAGCGACAAATGTGCGTTGGCTTAGCCTCGCAGCTGCT
CGACGCCTTGCTTTCACTGCCGCAGTTTGAACGCGTTGGGTACGTTCGTC
TACACTCTTCTGATGCTCGTATAGAAGCTACCATAGCTCGCGTGGCAAGC
GTGCCTGTCACTCTGGCCCGTGCTGCGTTGCAGAAATTCGGCGGAGCTGA
TGCTGCAGTGGCAGCGTTGTTAGACGGCTGGAGACCACAAATCGGAAAAA
GGGCTGAGAAGCATGAAAGCGCCAATCGAACTGTGGATTCACATCAGGTG
CAGCGACGCATCGCAAGGGATGATGCTCGGCGACAGGCTGAAGAGGAACG
AGAGGCTTCTACTGGACTGGCGGAGCTCGCAATCCAGACAGCTGGGGGAG
GTGAGCGCGCTGGAAGTTCGTCGCAATGCGCCATTGATGATGTGGATCAG
TACGCGGATATGGGCGATGACGTACCACTTGAAGGCGGCGTATCTCACTA
CCTCGCCCGTGATGACCATGAATCACTGGAAATTGATTTTCCGCCATTGT
CATACAACAACAACGGGCGCAGTTTGAAAAGGGGCGGCGCTTCGTCCAGC
ACATCTACAGCGAGGCGACAGAGAGGTAAACGAGGAGGAAGACAGGAAGA
TCGAAACGCCCAGAGCGCTGGACAGAATCGATCGAGAGAGGCGTCAGATG
AGGGGAGGGACAGCGCACGTGCGGATGCAAGTTCGGGTCGTGGGGGTGGA
AGGGGCCGCGGTCGTGGAAGGGGGCGTGGACGAGGGCGAGGTCGTGGCGC
TAATCACGGGCGGAGAACGCGAGCTGTCAAGAAGCAGGGCGGCTAA
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protein sequence of Ggra8774.t1

>Ggra8774.t1 ID=Ggra8774.t1|Name=Ggra8774.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=332bp
MLASLASASDNTRSAVIEALSTRSQRADAADKVQAWLRELANKPEGDVFP
NGLTQRQMCVGLASQLLDALLSLPQFERVGYVRLHSSDARIEATIARVAS
VPVTLARAALQKFGGADAAVAALLDGWRPQIGKRAEKHESANRTVDSHQV
QRRIARDDARRQAEEEREASTGLAELAIQTAGGGERAGSSSQCAIDDVDQ
YADMGDDVPLEGGVSHYLARDDHESLEIDFPPLSYNNNGRSLKRGGASSS
TSTARRQRGKRGGRQEDRNAQSAGQNRSREASDEGRDSARADASSGRGGG
RGRGRGRGRGRGRGRGANHGRRTRAVKKQGG*
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mRNA from alignment at tig00000860_pilon:88722..89717+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8774.t1 ID=Ggra8774.t1|Name=Ggra8774.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=996bp|location=Sequence derived from alignment at tig00000860_pilon:88722..89717+ (Gracilaria gracilis GNS1m male)
ATGCTTGCTTCTCTTGCGTCAGCAAGCGACAACACTCGTTCCGCAGTAAT
AGAAGCTCTATCCACCCGCTCACAAAGAGCCGATGCTGCAGACAAGGTGC
AAGCGTGGCTACGAGAACTGGCAAACAAACCCGAGGGCGATGTATTCCCA
AACGGTTTAACGCAGCGACAAATGTGCGTTGGCTTAGCCTCGCAGCTGCT
CGACGCCTTGCTTTCACTGCCGCAGTTTGAACGCGTTGGGTACGTTCGTC
TACACTCTTCTGATGCTCGTATAGAAGCTACCATAGCTCGCGTGGCAAGC
GTGCCTGTCACTCTGGCCCGTGCTGCGTTGCAGAAATTCGGCGGAGCTGA
TGCTGCAGTGGCAGCGTTGTTAGACGGCTGGAGACCACAAATCGGAAAAA
GGGCTGAGAAGCATGAAAGCGCCAATCGAACTGTGGATTCACATCAGGTG
CAGCGACGCATCGCAAGGGATGATGCTCGGCGACAGGCTGAAGAGGAACG
AGAGGCTTCTACTGGACTGGCGGAGCTCGCAATCCAGACAGCTGGGGGAG
GTGAGCGCGCTGGAAGTTCGTCGCAATGCGCCATTGATGATGTGGATCAG
TACGCGGATATGGGCGATGACGTACCACTTGAAGGCGGCGTATCTCACTA
CCTCGCCCGTGATGACCATGAATCACTGGAAATTGATTTTCCGCCATTGT
CATACAACAACAACGGGCGCAGTTTGAAAAGGGGCGGCGCTTCGTCCAGC
ACATCTACAGCGAGGCGACAGAGAGGTAAACGAGGAGGAAGACAGGAAGA
TCGAAACGCCCAGAGCGCTGGACAGAATCGATCGAGAGAGGCGTCAGATG
AGGGGAGGGACAGCGCACGTGCGGATGCAAGTTCGGGTCGTGGGGGTGGA
AGGGGCCGCGGTCGTGGAAGGGGGCGTGGACGAGGGCGAGGTCGTGGCGC
TAATCACGGGCGGAGAACGCGAGCTGTCAAGAAGCAGGGCGGCTAA
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Coding sequence (CDS) from alignment at tig00000860_pilon:88722..89717+

>Ggra8774.t1 ID=Ggra8774.t1|Name=Ggra8774.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=996bp|location=Sequence derived from alignment at tig00000860_pilon:88722..89717+ (Gracilaria gracilis GNS1m male)
ATGCTTGCTTCTCTTGCGTCAGCAAGCGACAACACTCGTTCCGCAGTAAT
AGAAGCTCTATCCACCCGCTCACAAAGAGCCGATGCTGCAGACAAGGTGC
AAGCGTGGCTACGAGAACTGGCAAACAAACCCGAGGGCGATGTATTCCCA
AACGGTTTAACGCAGCGACAAATGTGCGTTGGCTTAGCCTCGCAGCTGCT
CGACGCCTTGCTTTCACTGCCGCAGTTTGAACGCGTTGGGTACGTTCGTC
TACACTCTTCTGATGCTCGTATAGAAGCTACCATAGCTCGCGTGGCAAGC
GTGCCTGTCACTCTGGCCCGTGCTGCGTTGCAGAAATTCGGCGGAGCTGA
TGCTGCAGTGGCAGCGTTGTTAGACGGCTGGAGACCACAAATCGGAAAAA
GGGCTGAGAAGCATGAAAGCGCCAATCGAACTGTGGATTCACATCAGGTG
CAGCGACGCATCGCAAGGGATGATGCTCGGCGACAGGCTGAAGAGGAACG
AGAGGCTTCTACTGGACTGGCGGAGCTCGCAATCCAGACAGCTGGGGGAG
GTGAGCGCGCTGGAAGTTCGTCGCAATGCGCCATTGATGATGTGGATCAG
TACGCGGATATGGGCGATGACGTACCACTTGAAGGCGGCGTATCTCACTA
CCTCGCCCGTGATGACCATGAATCACTGGAAATTGATTTTCCGCCATTGT
CATACAACAACAACGGGCGCAGTTTGAAAAGGGGCGGCGCTTCGTCCAGC
ACATCTACAGCGAGGCGACAGAGAGGTAAACGAGGAGGAAGACAGGAAGA
TCGAAACGCCCAGAGCGCTGGACAGAATCGATCGAGAGAGGCGTCAGATG
AGGGGAGGGACAGCGCACGTGCGGATGCAAGTTCGGGTCGTGGGGGTGGA
AGGGGCCGCGGTCGTGGAAGGGGGCGTGGACGAGGGCGAGGTCGTGGCGC
TAATCACGGGCGGAGAACGCGAGCTGTCAAGAAGCAGGGCGGCTAA
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