Ggra8755.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8755.t1
Unique NameGgra8755.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length293
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:35899..36777 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8755Ggra8755Gracilaria gracilis GNS1m malegenetig00000860_pilon 35899..36777 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8755.t1.start1Ggra8755.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000860_pilon 35899..35901 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8755.t1.CDS1Ggra8755.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000860_pilon 35899..36777 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8755.t1.exon1Ggra8755.t1.exon1Gracilaria gracilis GNS1m maleexontig00000860_pilon 35899..36777 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8755.t1.stop1Ggra8755.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000860_pilon 36775..36777 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8755.t1Ggra8755.t1Gracilaria gracilis GNS1m malepolypeptidetig00000860_pilon 35899..36777 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8755.t1 ID=Ggra8755.t1|Name=Ggra8755.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=293bp
MPTNPSPSESLSRSQIHARNSFRNRGRFATNLSAPGTSASILRRHAQRRV
SETRARLRLNVEEIVNSLFCDASKTDYIPANINDGPLIEVIELILKKENR
LSTRLIIGVAKGVYLASANQRCLSRGIIKRDGQIVKRRTQVFGSVKFPDP
DRPDTLGSLKRALARYHRAGRLNHSDVDSTMAAKRPFLKLYKPSLFEYEG
YSRTTSSTGAVLLQPQNEEAQGGIDQTQINRQFYVSRVDATGQNDAEYVL
LKSVLAHQNSSLLKASVIIWNQKICALRDTGHLTSVEKFVVE*
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spliced messenger RNA

>Ggra8755.t1 ID=Ggra8755.t1|Name=Ggra8755.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=879bp|location=Sequence derived from alignment at tig00000860_pilon:35899..36777+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCACAAATCCTTCTCCCAGCGAAAGTCTTTCCCGGAGTCAAATTCA
CGCCCGGAATAGCTTTCGCAACCGTGGACGATTTGCTACCAATTTGAGTG
CGCCAGGAACTAGTGCCTCGATTCTGAGAAGGCACGCACAGCGTAGAGTC
TCTGAAACACGAGCTCGCCTTAGACTAAATGTCGAAGAGATTGTCAATTC
CCTTTTCTGTGACGCGTCAAAAACCGATTACATACCAGCAAATATCAATG
ATGGACCATTGATTGAAGTGATCGAGTTGATATTGAAGAAAGAAAATAGG
CTCAGCACTCGGCTCATCATTGGGGTTGCAAAGGGAGTTTATTTGGCTTC
CGCGAATCAACGTTGTTTATCAAGGGGAATCATTAAGCGTGACGGTCAAA
TTGTTAAGCGACGTACGCAAGTATTTGGGTCAGTTAAGTTTCCAGATCCA
GATCGCCCAGACACTCTCGGCTCTTTGAAAAGAGCACTTGCGAGATATCA
CCGTGCTGGGCGTCTAAATCATTCTGATGTTGATTCTACAATGGCGGCGA
AAAGGCCTTTTCTGAAGCTGTACAAACCCAGCCTATTCGAGTACGAAGGA
TATTCCAGAACTACCTCTTCAACTGGTGCAGTTCTTTTACAACCTCAAAA
TGAAGAAGCACAGGGTGGCATCGATCAAACCCAAATTAACCGCCAATTTT
ATGTATCAAGAGTGGACGCTACTGGCCAAAATGATGCTGAATATGTTTTG
CTTAAGAGTGTTCTGGCGCACCAGAATTCATCTTTGCTTAAAGCTTCAGT
TATCATTTGGAATCAAAAGATATGTGCTTTGCGTGACACTGGCCACCTTA
CAAGTGTAGAGAAGTTTGTGGTGGAATAA
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protein sequence of Ggra8755.t1

>Ggra8755.t1 ID=Ggra8755.t1|Name=Ggra8755.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=293bp
MPTNPSPSESLSRSQIHARNSFRNRGRFATNLSAPGTSASILRRHAQRRV
SETRARLRLNVEEIVNSLFCDASKTDYIPANINDGPLIEVIELILKKENR
LSTRLIIGVAKGVYLASANQRCLSRGIIKRDGQIVKRRTQVFGSVKFPDP
DRPDTLGSLKRALARYHRAGRLNHSDVDSTMAAKRPFLKLYKPSLFEYEG
YSRTTSSTGAVLLQPQNEEAQGGIDQTQINRQFYVSRVDATGQNDAEYVL
LKSVLAHQNSSLLKASVIIWNQKICALRDTGHLTSVEKFVVE*
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mRNA from alignment at tig00000860_pilon:35899..36777+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8755.t1 ID=Ggra8755.t1|Name=Ggra8755.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=879bp|location=Sequence derived from alignment at tig00000860_pilon:35899..36777+ (Gracilaria gracilis GNS1m male)
ATGCCCACAAATCCTTCTCCCAGCGAAAGTCTTTCCCGGAGTCAAATTCA
CGCCCGGAATAGCTTTCGCAACCGTGGACGATTTGCTACCAATTTGAGTG
CGCCAGGAACTAGTGCCTCGATTCTGAGAAGGCACGCACAGCGTAGAGTC
TCTGAAACACGAGCTCGCCTTAGACTAAATGTCGAAGAGATTGTCAATTC
CCTTTTCTGTGACGCGTCAAAAACCGATTACATACCAGCAAATATCAATG
ATGGACCATTGATTGAAGTGATCGAGTTGATATTGAAGAAAGAAAATAGG
CTCAGCACTCGGCTCATCATTGGGGTTGCAAAGGGAGTTTATTTGGCTTC
CGCGAATCAACGTTGTTTATCAAGGGGAATCATTAAGCGTGACGGTCAAA
TTGTTAAGCGACGTACGCAAGTATTTGGGTCAGTTAAGTTTCCAGATCCA
GATCGCCCAGACACTCTCGGCTCTTTGAAAAGAGCACTTGCGAGATATCA
CCGTGCTGGGCGTCTAAATCATTCTGATGTTGATTCTACAATGGCGGCGA
AAAGGCCTTTTCTGAAGCTGTACAAACCCAGCCTATTCGAGTACGAAGGA
TATTCCAGAACTACCTCTTCAACTGGTGCAGTTCTTTTACAACCTCAAAA
TGAAGAAGCACAGGGTGGCATCGATCAAACCCAAATTAACCGCCAATTTT
ATGTATCAAGAGTGGACGCTACTGGCCAAAATGATGCTGAATATGTTTTG
CTTAAGAGTGTTCTGGCGCACCAGAATTCATCTTTGCTTAAAGCTTCAGT
TATCATTTGGAATCAAAAGATATGTGCTTTGCGTGACACTGGCCACCTTA
CAAGTGTAGAGAAGTTTGTGGTGGAATAA
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Coding sequence (CDS) from alignment at tig00000860_pilon:35899..36777+

>Ggra8755.t1 ID=Ggra8755.t1|Name=Ggra8755.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=879bp|location=Sequence derived from alignment at tig00000860_pilon:35899..36777+ (Gracilaria gracilis GNS1m male)
ATGCCCACAAATCCTTCTCCCAGCGAAAGTCTTTCCCGGAGTCAAATTCA
CGCCCGGAATAGCTTTCGCAACCGTGGACGATTTGCTACCAATTTGAGTG
CGCCAGGAACTAGTGCCTCGATTCTGAGAAGGCACGCACAGCGTAGAGTC
TCTGAAACACGAGCTCGCCTTAGACTAAATGTCGAAGAGATTGTCAATTC
CCTTTTCTGTGACGCGTCAAAAACCGATTACATACCAGCAAATATCAATG
ATGGACCATTGATTGAAGTGATCGAGTTGATATTGAAGAAAGAAAATAGG
CTCAGCACTCGGCTCATCATTGGGGTTGCAAAGGGAGTTTATTTGGCTTC
CGCGAATCAACGTTGTTTATCAAGGGGAATCATTAAGCGTGACGGTCAAA
TTGTTAAGCGACGTACGCAAGTATTTGGGTCAGTTAAGTTTCCAGATCCA
GATCGCCCAGACACTCTCGGCTCTTTGAAAAGAGCACTTGCGAGATATCA
CCGTGCTGGGCGTCTAAATCATTCTGATGTTGATTCTACAATGGCGGCGA
AAAGGCCTTTTCTGAAGCTGTACAAACCCAGCCTATTCGAGTACGAAGGA
TATTCCAGAACTACCTCTTCAACTGGTGCAGTTCTTTTACAACCTCAAAA
TGAAGAAGCACAGGGTGGCATCGATCAAACCCAAATTAACCGCCAATTTT
ATGTATCAAGAGTGGACGCTACTGGCCAAAATGATGCTGAATATGTTTTG
CTTAAGAGTGTTCTGGCGCACCAGAATTCATCTTTGCTTAAAGCTTCAGT
TATCATTTGGAATCAAAAGATATGTGCTTTGCGTGACACTGGCCACCTTA
CAAGTGTAGAGAAGTTTGTGGTGGAATAA
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