Ggra8749.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8749.t1
Unique NameGgra8749.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length155
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000127_piloncontigtig00000127_pilon:86215..86679 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8749Ggra8749Gracilaria gracilis GNS1m malegenetig00000127_pilon 86215..86679 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8749.t1.stop1Ggra8749.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000127_pilon 86215..86217 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8749.t1.CDS1Ggra8749.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000127_pilon 86215..86679 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8749.t1.exon1Ggra8749.t1.exon1Gracilaria gracilis GNS1m maleexontig00000127_pilon 86215..86679 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8749.t1.start1Ggra8749.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000127_pilon 86677..86679 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8749.t1Ggra8749.t1Gracilaria gracilis GNS1m malepolypeptidetig00000127_pilon 86215..86679 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8749.t1 ID=Ggra8749.t1|Name=Ggra8749.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=155bp
MDSAEHTLDMNTKIALVMLKSKEPTFALALREALAKGYDKNVLTELPSAL
KNDFRGELSSRYASLLLECGRHLFKIRVVAIEIRDLLLDSPNPDKGITRE
TCGAILQRICILNRTAFRLWSYFVAVWDILVDVSMDADENAIEELNYRTN
KTSI*
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spliced messenger RNA

>Ggra8749.t1 ID=Ggra8749.t1|Name=Ggra8749.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=465bp|location=Sequence derived from alignment at tig00000127_pilon:86215..86679- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACTCCGCCGAACACACTCTCGATATGAACACAAAGATTGCCCTCGT
GATGCTTAAATCGAAAGAACCCACGTTCGCTCTTGCCTTGAGAGAGGCAC
TAGCCAAAGGGTATGACAAGAATGTATTAACTGAATTACCCAGCGCCCTG
AAGAATGACTTTCGAGGTGAACTCTCCAGCCGATATGCGAGCTTGCTCTT
AGAGTGCGGCCGTCATCTTTTTAAGATCCGCGTGGTGGCAATTGAAATTC
GCGATCTCTTACTCGATTCTCCAAACCCCGACAAAGGGATTACTAGGGAA
ACATGTGGAGCAATTCTCCAACGCATATGCATCTTAAACCGTACTGCTTT
CCGATTGTGGTCCTATTTCGTGGCGGTATGGGACATACTCGTCGACGTTA
GTATGGATGCCGACGAGAACGCCATAGAGGAGTTAAATTACAGGACCAAC
AAGACTAGCATATGA
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protein sequence of Ggra8749.t1

>Ggra8749.t1 ID=Ggra8749.t1|Name=Ggra8749.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=155bp
MDSAEHTLDMNTKIALVMLKSKEPTFALALREALAKGYDKNVLTELPSAL
KNDFRGELSSRYASLLLECGRHLFKIRVVAIEIRDLLLDSPNPDKGITRE
TCGAILQRICILNRTAFRLWSYFVAVWDILVDVSMDADENAIEELNYRTN
KTSI*
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mRNA from alignment at tig00000127_pilon:86215..86679-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8749.t1 ID=Ggra8749.t1|Name=Ggra8749.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=465bp|location=Sequence derived from alignment at tig00000127_pilon:86215..86679- (Gracilaria gracilis GNS1m male)
ATGGACTCCGCCGAACACACTCTCGATATGAACACAAAGATTGCCCTCGT
GATGCTTAAATCGAAAGAACCCACGTTCGCTCTTGCCTTGAGAGAGGCAC
TAGCCAAAGGGTATGACAAGAATGTATTAACTGAATTACCCAGCGCCCTG
AAGAATGACTTTCGAGGTGAACTCTCCAGCCGATATGCGAGCTTGCTCTT
AGAGTGCGGCCGTCATCTTTTTAAGATCCGCGTGGTGGCAATTGAAATTC
GCGATCTCTTACTCGATTCTCCAAACCCCGACAAAGGGATTACTAGGGAA
ACATGTGGAGCAATTCTCCAACGCATATGCATCTTAAACCGTACTGCTTT
CCGATTGTGGTCCTATTTCGTGGCGGTATGGGACATACTCGTCGACGTTA
GTATGGATGCCGACGAGAACGCCATAGAGGAGTTAAATTACAGGACCAAC
AAGACTAGCATATGA
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Coding sequence (CDS) from alignment at tig00000127_pilon:86215..86679-

>Ggra8749.t1 ID=Ggra8749.t1|Name=Ggra8749.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=465bp|location=Sequence derived from alignment at tig00000127_pilon:86215..86679- (Gracilaria gracilis GNS1m male)
ATGGACTCCGCCGAACACACTCTCGATATGAACACAAAGATTGCCCTCGT
GATGCTTAAATCGAAAGAACCCACGTTCGCTCTTGCCTTGAGAGAGGCAC
TAGCCAAAGGGTATGACAAGAATGTATTAACTGAATTACCCAGCGCCCTG
AAGAATGACTTTCGAGGTGAACTCTCCAGCCGATATGCGAGCTTGCTCTT
AGAGTGCGGCCGTCATCTTTTTAAGATCCGCGTGGTGGCAATTGAAATTC
GCGATCTCTTACTCGATTCTCCAAACCCCGACAAAGGGATTACTAGGGAA
ACATGTGGAGCAATTCTCCAACGCATATGCATCTTAAACCGTACTGCTTT
CCGATTGTGGTCCTATTTCGTGGCGGTATGGGACATACTCGTCGACGTTA
GTATGGATGCCGACGAGAACGCCATAGAGGAGTTAAATTACAGGACCAAC
AAGACTAGCATATGA
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