Ggra8735.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8735.t1
Unique NameGgra8735.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length324
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000127_piloncontigtig00000127_pilon:25222..26304 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8735Ggra8735Gracilaria gracilis GNS1m malegenetig00000127_pilon 25222..26304 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8735.t1Ggra8735.t1Gracilaria gracilis GNS1m malepolypeptidetig00000127_pilon 25222..26304 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8735.t1.stop1Ggra8735.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000127_pilon 25222..25224 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8735.t1.CDS1Ggra8735.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000127_pilon 25222..26053 -
Ggra8735.t1.CDS2Ggra8735.t1.CDS2Gracilaria gracilis GNS1m maleCDStig00000127_pilon 26165..26304 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8735.t1.exon1Ggra8735.t1.exon1Gracilaria gracilis GNS1m maleexontig00000127_pilon 25222..26053 -
Ggra8735.t1.exon2Ggra8735.t1.exon2Gracilaria gracilis GNS1m maleexontig00000127_pilon 26165..26304 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8735.t1.intron1Ggra8735.t1.intron1Gracilaria gracilis GNS1m maleintrontig00000127_pilon 26054..26164 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8735.t1.start1Ggra8735.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000127_pilon 26302..26304 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8735.t1 ID=Ggra8735.t1|Name=Ggra8735.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=324bp
MSVTVRSSPQADLLEALVGLWVKVNVREGSSCEGVLVNYDPVQQLHCLTT
SAGSAWICLRDVPMSVSAPGSLSPAFKLLCNAQKGSAPLQSDTQSSSAVQ
PGNEQTALLAAFSGSQSSARSQEVNVLEHNMDTAISTFNLLPRSSAAINK
GTAERSQVQPPTASPAQEPESVSHKFVNTRAATPHPWKRNRQNLDESIQS
APPHLSPISKPICSPAPLSTSDLPETALDNLLPRSSAAINKSTAERSQVQ
PPTASPAQEPGAVSHKFVNTRAATPHPLKRNRQNLDESIQSAPPHDSPIS
KRVCSPAPLSTSDLPETALEKST*
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spliced messenger RNA

>Ggra8735.t1 ID=Ggra8735.t1|Name=Ggra8735.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=972bp|location=Sequence derived from alignment at tig00000127_pilon:25222..26304- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCGTCACAGTGCGGAGCAGCCCGCAAGCTGATCTGCTTGAAGCACT
GGTAGGGTTGTGGGTCAAGGTCAATGTGCGAGAAGGCTCGAGTTGCGAAG
GAGTGCTCGTAAATTATGACCCGGTACAGCAGTTGCACTGCCTTACCACG
AGCGCTGGCAGCGCATGGATTTGTCTCCGTGATGTTCCGATGTCCGTGTC
TGCACCGGGAAGTCTTTCTCCGGCATTCAAGCTCCTATGTAACGCACAGA
AGGGAAGCGCACCCTTGCAGTCTGACACACAATCTTCATCAGCAGTGCAG
CCCGGCAATGAGCAAACGGCTCTTCTTGCTGCTTTTTCAGGCTCACAAAG
TTCTGCCAGAAGTCAGGAAGTGAACGTTCTTGAACATAACATGGACACCG
CAATTAGTACGTTCAATCTGCTCCCAAGAAGTTCAGCTGCTATTAATAAG
GGTACCGCAGAGCGATCTCAGGTGCAACCCCCAACAGCATCGCCGGCCCA
AGAGCCTGAATCAGTGTCGCATAAGTTTGTGAATACACGTGCTGCGACGC
CGCATCCGTGGAAACGCAACAGGCAGAACTTAGACGAAAGCATTCAATCC
GCTCCGCCACACCTTTCGCCGATATCGAAACCCATCTGTTCCCCTGCTCC
TCTCTCGACATCTGACCTGCCGGAGACTGCACTTGACAATCTGCTCCCAA
GAAGTTCAGCTGCTATTAATAAGAGTACCGCAGAGCGATCTCAGGTGCAA
CCCCCAACAGCATCGCCGGCCCAAGAGCCTGGAGCAGTGTCGCATAAGTT
TGTGAATACACGTGCTGCGACGCCGCATCCGTTGAAACGCAACAGGCAGA
ACCTAGACGAAAGCATTCAATCCGCTCCGCCACACGATTCGCCGATATCG
AAACGCGTCTGTTCCCCTGCTCCTCTCTCGACATCTGACCTGCCGGAGAC
TGCACTTGAGAAGAGCACGTGA
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protein sequence of Ggra8735.t1

>Ggra8735.t1 ID=Ggra8735.t1|Name=Ggra8735.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=324bp
MSVTVRSSPQADLLEALVGLWVKVNVREGSSCEGVLVNYDPVQQLHCLTT
SAGSAWICLRDVPMSVSAPGSLSPAFKLLCNAQKGSAPLQSDTQSSSAVQ
PGNEQTALLAAFSGSQSSARSQEVNVLEHNMDTAISTFNLLPRSSAAINK
GTAERSQVQPPTASPAQEPESVSHKFVNTRAATPHPWKRNRQNLDESIQS
APPHLSPISKPICSPAPLSTSDLPETALDNLLPRSSAAINKSTAERSQVQ
PPTASPAQEPGAVSHKFVNTRAATPHPLKRNRQNLDESIQSAPPHDSPIS
KRVCSPAPLSTSDLPETALEKST*
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mRNA from alignment at tig00000127_pilon:25222..26304-

Legend: polypeptideCDSexonstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8735.t1 ID=Ggra8735.t1|Name=Ggra8735.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1083bp|location=Sequence derived from alignment at tig00000127_pilon:25222..26304- (Gracilaria gracilis GNS1m male)
ATGTCCGTCACAGTGCGGAGCAGCCCGCAAGCTGATCTGCTTGAAGCACT
GGTAGGGTTGTGGGTCAAGGTCAATGTGCGAGAAGGCTCGAGTTGCGAAG
GAGTGCTCGTAAATTATGACCCGGTACAGCAGTTGCACTGGTAAGTCGTC
TTTTTTCTCCTGGGTTGCTTGCTGCAAACCAACAGTTCTACGACGTGCGA
ATGCTGATTGGCTTGTTGAGTATATCTCCGTTTCAAATCATGATGATACA
GCCTTACCACGAGCGCTGGCAGCGCATGGATTTGTCTCCGTGATGTTCCG
ATGTCCGTGTCTGCACCGGGAAGTCTTTCTCCGGCATTCAAGCTCCTATG
TAACGCACAGAAGGGAAGCGCACCCTTGCAGTCTGACACACAATCTTCAT
CAGCAGTGCAGCCCGGCAATGAGCAAACGGCTCTTCTTGCTGCTTTTTCA
GGCTCACAAAGTTCTGCCAGAAGTCAGGAAGTGAACGTTCTTGAACATAA
CATGGACACCGCAATTAGTACGTTCAATCTGCTCCCAAGAAGTTCAGCTG
CTATTAATAAGGGTACCGCAGAGCGATCTCAGGTGCAACCCCCAACAGCA
TCGCCGGCCCAAGAGCCTGAATCAGTGTCGCATAAGTTTGTGAATACACG
TGCTGCGACGCCGCATCCGTGGAAACGCAACAGGCAGAACTTAGACGAAA
GCATTCAATCCGCTCCGCCACACCTTTCGCCGATATCGAAACCCATCTGT
TCCCCTGCTCCTCTCTCGACATCTGACCTGCCGGAGACTGCACTTGACAA
TCTGCTCCCAAGAAGTTCAGCTGCTATTAATAAGAGTACCGCAGAGCGAT
CTCAGGTGCAACCCCCAACAGCATCGCCGGCCCAAGAGCCTGGAGCAGTG
TCGCATAAGTTTGTGAATACACGTGCTGCGACGCCGCATCCGTTGAAACG
CAACAGGCAGAACCTAGACGAAAGCATTCAATCCGCTCCGCCACACGATT
CGCCGATATCGAAACGCGTCTGTTCCCCTGCTCCTCTCTCGACATCTGAC
CTGCCGGAGACTGCACTTGAGAAGAGCACGTGA
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Coding sequence (CDS) from alignment at tig00000127_pilon:25222..26304-

>Ggra8735.t1 ID=Ggra8735.t1|Name=Ggra8735.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=972bp|location=Sequence derived from alignment at tig00000127_pilon:25222..26304- (Gracilaria gracilis GNS1m male)
ATGTCCGTCACAGTGCGGAGCAGCCCGCAAGCTGATCTGCTTGAAGCACT
GGTAGGGTTGTGGGTCAAGGTCAATGTGCGAGAAGGCTCGAGTTGCGAAG
GAGTGCTCGTAAATTATGACCCGGTACAGCAGTTGCACTGCCTTACCACG
AGCGCTGGCAGCGCATGGATTTGTCTCCGTGATGTTCCGATGTCCGTGTC
TGCACCGGGAAGTCTTTCTCCGGCATTCAAGCTCCTATGTAACGCACAGA
AGGGAAGCGCACCCTTGCAGTCTGACACACAATCTTCATCAGCAGTGCAG
CCCGGCAATGAGCAAACGGCTCTTCTTGCTGCTTTTTCAGGCTCACAAAG
TTCTGCCAGAAGTCAGGAAGTGAACGTTCTTGAACATAACATGGACACCG
CAATTAGTACGTTCAATCTGCTCCCAAGAAGTTCAGCTGCTATTAATAAG
GGTACCGCAGAGCGATCTCAGGTGCAACCCCCAACAGCATCGCCGGCCCA
AGAGCCTGAATCAGTGTCGCATAAGTTTGTGAATACACGTGCTGCGACGC
CGCATCCGTGGAAACGCAACAGGCAGAACTTAGACGAAAGCATTCAATCC
GCTCCGCCACACCTTTCGCCGATATCGAAACCCATCTGTTCCCCTGCTCC
TCTCTCGACATCTGACCTGCCGGAGACTGCACTTGACAATCTGCTCCCAA
GAAGTTCAGCTGCTATTAATAAGAGTACCGCAGAGCGATCTCAGGTGCAA
CCCCCAACAGCATCGCCGGCCCAAGAGCCTGGAGCAGTGTCGCATAAGTT
TGTGAATACACGTGCTGCGACGCCGCATCCGTTGAAACGCAACAGGCAGA
ACCTAGACGAAAGCATTCAATCCGCTCCGCCACACGATTCGCCGATATCG
AAACGCGTCTGTTCCCCTGCTCCTCTCTCGACATCTGACCTGCCGGAGAC
TGCACTTGAGAAGAGCACGTGA
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