Ggra8695.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8695.t1
Unique NameGgra8695.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length219
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000244_piloncontigtig00000244_pilon:80377..81033 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8695Ggra8695Gracilaria gracilis GNS1m malegenetig00000244_pilon 80377..81033 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8695.t1.start1Ggra8695.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000244_pilon 80377..80379 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8695.t1.CDS1Ggra8695.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000244_pilon 80377..81033 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8695.t1.exon1Ggra8695.t1.exon1Gracilaria gracilis GNS1m maleexontig00000244_pilon 80377..81033 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8695.t1.stop1Ggra8695.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000244_pilon 81031..81033 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8695.t1Ggra8695.t1Gracilaria gracilis GNS1m malepolypeptidetig00000244_pilon 80377..81033 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8695.t1 ID=Ggra8695.t1|Name=Ggra8695.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=219bp
MAAITTANVQYIAAVALKESKSVIKSDTDEEGCVALAAVRAGGRENDAQH
VLDQALLDYKIEADKRVVSSDDSTAKNMERRKESRLQKANRLAKRKAEYE
VERKERENANKMRLLERRAADRHLLRAQTMSANAAAASAAVAARQTEQFG
AFLSLYAQKTSLVLPKMSTPMPSSGAIASLEMDESLLVDDPSKEGQEGHP
KTTGDPSETADAEEPEQN*
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spliced messenger RNA

>Ggra8695.t1 ID=Ggra8695.t1|Name=Ggra8695.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=657bp|location=Sequence derived from alignment at tig00000244_pilon:80377..81033+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
atgGCCGCCATAACAACTGCAAACGTGCAGTACATTGCAGCAGTGGCTCT
TAAAGAGAGCAAAAGCGTCATCAAAAGCGATACGGATGAAGAAGGATGTG
TTGCTTTGGCGGCAGTTAGAGCAGGTGGAAGAGAAAATGATGCTCAACAT
GTTCTTGATCAGGCCCTGTTAGACTACAAAATTGAAGCCGACAAACGTGT
GGTGTCTTCTGATGATAGTACCGCAAAGAATATGGAACGCCGTAAAGAAT
CTCGTCTCCAAAAAGCTAACCGTTTGGCGAAGCGGAAAGCAGAATATGAG
GTGGAGAGAAAGGAGCGAGAGAACGCAAACAAGATGCGTTTACTAGAACG
TAGAGCCGCTGATCGTCACCTTCTTCGTGCACAAACCATGAGTGCAAATG
CAGCAGCAGCAAGCGCGGCAGTCGCTGCACGGCAAACAGAGCAGTTCGGC
GCGTTTCTTTCTTTATATGCGCAAAAGACCAGCTTGGTACTGCCAAAGAT
GTCTACACCGATGCCCTCTTCTGGTGCAATTGCATCTTTGGAGATGGATG
AATCGCTGCTGGTTGACGACCCGAGCAAAGAAGGGCAAGAAGGACATCCG
AAAACCACGGGAGATCCCAGCGAAACAGCGGACGCAGAGGAACCGGAGCA
AAACTAA
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protein sequence of Ggra8695.t1

>Ggra8695.t1 ID=Ggra8695.t1|Name=Ggra8695.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=219bp
MAAITTANVQYIAAVALKESKSVIKSDTDEEGCVALAAVRAGGRENDAQH
VLDQALLDYKIEADKRVVSSDDSTAKNMERRKESRLQKANRLAKRKAEYE
VERKERENANKMRLLERRAADRHLLRAQTMSANAAAASAAVAARQTEQFG
AFLSLYAQKTSLVLPKMSTPMPSSGAIASLEMDESLLVDDPSKEGQEGHP
KTTGDPSETADAEEPEQN*
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mRNA from alignment at tig00000244_pilon:80377..81033+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8695.t1 ID=Ggra8695.t1|Name=Ggra8695.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=657bp|location=Sequence derived from alignment at tig00000244_pilon:80377..81033+ (Gracilaria gracilis GNS1m male)
atgGCCGCCATAACAACTGCAAACGTGCAGTACATTGCAGCAGTGGCTCT
TAAAGAGAGCAAAAGCGTCATCAAAAGCGATACGGATGAAGAAGGATGTG
TTGCTTTGGCGGCAGTTAGAGCAGGTGGAAGAGAAAATGATGCTCAACAT
GTTCTTGATCAGGCCCTGTTAGACTACAAAATTGAAGCCGACAAACGTGT
GGTGTCTTCTGATGATAGTACCGCAAAGAATATGGAACGCCGTAAAGAAT
CTCGTCTCCAAAAAGCTAACCGTTTGGCGAAGCGGAAAGCAGAATATGAG
GTGGAGAGAAAGGAGCGAGAGAACGCAAACAAGATGCGTTTACTAGAACG
TAGAGCCGCTGATCGTCACCTTCTTCGTGCACAAACCATGAGTGCAAATG
CAGCAGCAGCAAGCGCGGCAGTCGCTGCACGGCAAACAGAGCAGTTCGGC
GCGTTTCTTTCTTTATATGCGCAAAAGACCAGCTTGGTACTGCCAAAGAT
GTCTACACCGATGCCCTCTTCTGGTGCAATTGCATCTTTGGAGATGGATG
AATCGCTGCTGGTTGACGACCCGAGCAAAGAAGGGCAAGAAGGACATCCG
AAAACCACGGGAGATCCCAGCGAAACAGCGGACGCAGAGGAACCGGAGCA
AAACTAA
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Coding sequence (CDS) from alignment at tig00000244_pilon:80377..81033+

>Ggra8695.t1 ID=Ggra8695.t1|Name=Ggra8695.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=657bp|location=Sequence derived from alignment at tig00000244_pilon:80377..81033+ (Gracilaria gracilis GNS1m male)
atgGCCGCCATAACAACTGCAAACGTGCAGTACATTGCAGCAGTGGCTCT
TAAAGAGAGCAAAAGCGTCATCAAAAGCGATACGGATGAAGAAGGATGTG
TTGCTTTGGCGGCAGTTAGAGCAGGTGGAAGAGAAAATGATGCTCAACAT
GTTCTTGATCAGGCCCTGTTAGACTACAAAATTGAAGCCGACAAACGTGT
GGTGTCTTCTGATGATAGTACCGCAAAGAATATGGAACGCCGTAAAGAAT
CTCGTCTCCAAAAAGCTAACCGTTTGGCGAAGCGGAAAGCAGAATATGAG
GTGGAGAGAAAGGAGCGAGAGAACGCAAACAAGATGCGTTTACTAGAACG
TAGAGCCGCTGATCGTCACCTTCTTCGTGCACAAACCATGAGTGCAAATG
CAGCAGCAGCAAGCGCGGCAGTCGCTGCACGGCAAACAGAGCAGTTCGGC
GCGTTTCTTTCTTTATATGCGCAAAAGACCAGCTTGGTACTGCCAAAGAT
GTCTACACCGATGCCCTCTTCTGGTGCAATTGCATCTTTGGAGATGGATG
AATCGCTGCTGGTTGACGACCCGAGCAAAGAAGGGCAAGAAGGACATCCG
AAAACCACGGGAGATCCCAGCGAAACAGCGGACGCAGAGGAACCGGAGCA
AAACTAA
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