Ggra8654.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8654.t1
Unique NameGgra8654.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length172
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000855_piloncontigtig00000855_pilon:303772..304287 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8654Ggra8654Gracilaria gracilis GNS1m malegenetig00000855_pilon 303772..304287 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8654.t1.start1Ggra8654.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000855_pilon 303772..303774 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8654.t1.CDS1Ggra8654.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000855_pilon 303772..304287 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8654.t1.exon1Ggra8654.t1.exon1Gracilaria gracilis GNS1m maleexontig00000855_pilon 303772..304287 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8654.t1.stop1Ggra8654.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000855_pilon 304285..304287 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8654.t1Ggra8654.t1Gracilaria gracilis GNS1m malepolypeptidetig00000855_pilon 303772..304287 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8654.t1 ID=Ggra8654.t1|Name=Ggra8654.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=172bp
MGLLHYVLFLAGLSFVVAQEARVNCVLQAFGSDLEGKGVEIEIQNDGFGC
SNWDPNAPFVRKSAKFIGGEAEVAFSIQSNVFGLCFTDIFVWVTLPYTGC
SPLERDIWSATWGLGRRGIGTCRALEQRCGAVTSDAAVPYIDMWCRRPRS
DGGQPEEMEVSWAFSQNNDKC*
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spliced messenger RNA

>Ggra8654.t1 ID=Ggra8654.t1|Name=Ggra8654.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=516bp|location=Sequence derived from alignment at tig00000855_pilon:303772..304287+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCCTCCTTCATTACGTTCTCTTCCTCGCCGGTCTGTCCTTCGTCGT
CGCCCAGGAAGCCCGAGTGAATTGCGTTCTTCAAGCGTTTGGAAGCGATC
TTGAAGGGAAGGGTGTCGAAATCGAAATCCAGAACGACGGGTTTGGTTGC
TCCAACTGGGATCCCAACGCGCCTTTTGTTCGGAAAAGCGCGAAATTTAT
TGGTGGCGAAGCCGAGGTTGCATTTTCTATCCAATCGAACGTGTTTGGGC
TATGCTTCACGGATATATTCGTGTGGGTGACGCTTCCATACACTGGATGT
TCGCCGCTGGAGCGAGACATATGGTCTGCCACTTGGGGACTTGGAAGGAG
GGGCATTGGTACTTGCCGCGCACTGGAGCAGCGGTGCGGGGCTGTCACTT
CTGATGCAGCGGTGCCTTACATCGATATGTGGTGTCGACGACCTCGATCG
GATGGAGGTCAACCAGAAGAAATGGAAGTCTCTTGGGCCTTTTCACAAAA
CAACGACAAATGCTAA
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protein sequence of Ggra8654.t1

>Ggra8654.t1 ID=Ggra8654.t1|Name=Ggra8654.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=172bp
MGLLHYVLFLAGLSFVVAQEARVNCVLQAFGSDLEGKGVEIEIQNDGFGC
SNWDPNAPFVRKSAKFIGGEAEVAFSIQSNVFGLCFTDIFVWVTLPYTGC
SPLERDIWSATWGLGRRGIGTCRALEQRCGAVTSDAAVPYIDMWCRRPRS
DGGQPEEMEVSWAFSQNNDKC*
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mRNA from alignment at tig00000855_pilon:303772..304287+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8654.t1 ID=Ggra8654.t1|Name=Ggra8654.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=516bp|location=Sequence derived from alignment at tig00000855_pilon:303772..304287+ (Gracilaria gracilis GNS1m male)
ATGGGCCTCCTTCATTACGTTCTCTTCCTCGCCGGTCTGTCCTTCGTCGT
CGCCCAGGAAGCCCGAGTGAATTGCGTTCTTCAAGCGTTTGGAAGCGATC
TTGAAGGGAAGGGTGTCGAAATCGAAATCCAGAACGACGGGTTTGGTTGC
TCCAACTGGGATCCCAACGCGCCTTTTGTTCGGAAAAGCGCGAAATTTAT
TGGTGGCGAAGCCGAGGTTGCATTTTCTATCCAATCGAACGTGTTTGGGC
TATGCTTCACGGATATATTCGTGTGGGTGACGCTTCCATACACTGGATGT
TCGCCGCTGGAGCGAGACATATGGTCTGCCACTTGGGGACTTGGAAGGAG
GGGCATTGGTACTTGCCGCGCACTGGAGCAGCGGTGCGGGGCTGTCACTT
CTGATGCAGCGGTGCCTTACATCGATATGTGGTGTCGACGACCTCGATCG
GATGGAGGTCAACCAGAAGAAATGGAAGTCTCTTGGGCCTTTTCACAAAA
CAACGACAAATGCTAA
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Coding sequence (CDS) from alignment at tig00000855_pilon:303772..304287+

>Ggra8654.t1 ID=Ggra8654.t1|Name=Ggra8654.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=516bp|location=Sequence derived from alignment at tig00000855_pilon:303772..304287+ (Gracilaria gracilis GNS1m male)
ATGGGCCTCCTTCATTACGTTCTCTTCCTCGCCGGTCTGTCCTTCGTCGT
CGCCCAGGAAGCCCGAGTGAATTGCGTTCTTCAAGCGTTTGGAAGCGATC
TTGAAGGGAAGGGTGTCGAAATCGAAATCCAGAACGACGGGTTTGGTTGC
TCCAACTGGGATCCCAACGCGCCTTTTGTTCGGAAAAGCGCGAAATTTAT
TGGTGGCGAAGCCGAGGTTGCATTTTCTATCCAATCGAACGTGTTTGGGC
TATGCTTCACGGATATATTCGTGTGGGTGACGCTTCCATACACTGGATGT
TCGCCGCTGGAGCGAGACATATGGTCTGCCACTTGGGGACTTGGAAGGAG
GGGCATTGGTACTTGCCGCGCACTGGAGCAGCGGTGCGGGGCTGTCACTT
CTGATGCAGCGGTGCCTTACATCGATATGTGGTGTCGACGACCTCGATCG
GATGGAGGTCAACCAGAAGAAATGGAAGTCTCTTGGGCCTTTTCACAAAA
CAACGACAAATGCTAA
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