Ggra8649.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8649.t1
Unique NameGgra8649.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length266
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000855_piloncontigtig00000855_pilon:272731..273528 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8649Ggra8649Gracilaria gracilis GNS1m malegenetig00000855_pilon 272731..273528 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8649.t1.start1Ggra8649.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000855_pilon 272731..272733 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8649.t1.CDS1Ggra8649.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000855_pilon 272731..273528 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8649.t1.exon1Ggra8649.t1.exon1Gracilaria gracilis GNS1m maleexontig00000855_pilon 272731..273528 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8649.t1.stop1Ggra8649.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000855_pilon 273526..273528 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8649.t1Ggra8649.t1Gracilaria gracilis GNS1m malepolypeptidetig00000855_pilon 272731..273528 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8649.t1 ID=Ggra8649.t1|Name=Ggra8649.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=266bp
MASAFLLSVACASPMFSPAQNIVDDIIHGKGRMSPSGTDLLYTSDRPIAP
SIEQAAGIQRSRLGYVQTTGVVTGFTLPRSRQIVVKAIMNGSVSFEGKLA
SDIEDETDKLVSEYSQSFQDFYRREKESMKARAGGGYFCFFQAAANYGYS
DDQITRETLEDGEFRDFRDRASAMLASQSTSTLSANFSVEIEGRSEGYRE
TITVFGYVYINQITLSSGEIFNVAKKNSELVVADQNGDVRDKETITIEKE
NINDNLLDTELSSGN*
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spliced messenger RNA

>Ggra8649.t1 ID=Ggra8649.t1|Name=Ggra8649.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=798bp|location=Sequence derived from alignment at tig00000855_pilon:272731..273528+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTAGCGCTTTCCTCCTGTCTGTTGCTTGTGCTTCTCCTATGTTCTC
TCCTGCGCAAAATATAGTTGATGATATCATTCATGGAAAAGGGAGAATGT
CGCCGTCGGGCACTGACTTGCTATACACTTCGGACAGACCGATCGCTCCC
AGTATTGAACAGGCAGCGGGCATTCAGAGATCGAGGCTGGGATACGTTCA
GACAACAGGTGTCGTGACAGGCTTCACTTTGCCGAGAAGTAGACAAATCG
TCGTGAAGGCCATCATGAACGGTTCTGTTTCGTTCGAAGGCAAGCTTGCC
AGTGACATCGAAGATGAGACGGATAAGCTTGTAAGCGAGTACTCGCAATC
GTTTCAGGACTTCTACAGGCGTGAGAAAGAGAGCATGAAGGCGAGGGCCG
GTGGCGGATATTTCTGTTTCTTCCAGGCCGCAGCCAACTATGGATACTCC
GATGATCAGATCACGCGGGAAACTCTGGAAGATGGCGAGTTTCGAGACTT
CCGTGACAGGGCCAGCGCCATGTTGGCTTCGCAGTCGACTTCCACTTTGT
CGGCCAACTTCAGCGTGGAGATCGAAGGTAGGTCGGAGGGATACCGCGAG
ACCATAACTGTTTTCGGTTACGTGTATATCAACCAGATTACATTGAGCTC
CGGTGAGATATTCAACGTTGCTAAGAAGAATTCTGAGCTCGTTGTGGCGG
ATCAGAACGGTGACGTTCGTGATAAGGAGACGATTACAATTGAGAAGGAG
AACATTAACGACAACCTACTGGATACTGAACTCTCCTCTGGCAACTAA
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protein sequence of Ggra8649.t1

>Ggra8649.t1 ID=Ggra8649.t1|Name=Ggra8649.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=266bp
MASAFLLSVACASPMFSPAQNIVDDIIHGKGRMSPSGTDLLYTSDRPIAP
SIEQAAGIQRSRLGYVQTTGVVTGFTLPRSRQIVVKAIMNGSVSFEGKLA
SDIEDETDKLVSEYSQSFQDFYRREKESMKARAGGGYFCFFQAAANYGYS
DDQITRETLEDGEFRDFRDRASAMLASQSTSTLSANFSVEIEGRSEGYRE
TITVFGYVYINQITLSSGEIFNVAKKNSELVVADQNGDVRDKETITIEKE
NINDNLLDTELSSGN*
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mRNA from alignment at tig00000855_pilon:272731..273528+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8649.t1 ID=Ggra8649.t1|Name=Ggra8649.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=798bp|location=Sequence derived from alignment at tig00000855_pilon:272731..273528+ (Gracilaria gracilis GNS1m male)
ATGGCTAGCGCTTTCCTCCTGTCTGTTGCTTGTGCTTCTCCTATGTTCTC
TCCTGCGCAAAATATAGTTGATGATATCATTCATGGAAAAGGGAGAATGT
CGCCGTCGGGCACTGACTTGCTATACACTTCGGACAGACCGATCGCTCCC
AGTATTGAACAGGCAGCGGGCATTCAGAGATCGAGGCTGGGATACGTTCA
GACAACAGGTGTCGTGACAGGCTTCACTTTGCCGAGAAGTAGACAAATCG
TCGTGAAGGCCATCATGAACGGTTCTGTTTCGTTCGAAGGCAAGCTTGCC
AGTGACATCGAAGATGAGACGGATAAGCTTGTAAGCGAGTACTCGCAATC
GTTTCAGGACTTCTACAGGCGTGAGAAAGAGAGCATGAAGGCGAGGGCCG
GTGGCGGATATTTCTGTTTCTTCCAGGCCGCAGCCAACTATGGATACTCC
GATGATCAGATCACGCGGGAAACTCTGGAAGATGGCGAGTTTCGAGACTT
CCGTGACAGGGCCAGCGCCATGTTGGCTTCGCAGTCGACTTCCACTTTGT
CGGCCAACTTCAGCGTGGAGATCGAAGGTAGGTCGGAGGGATACCGCGAG
ACCATAACTGTTTTCGGTTACGTGTATATCAACCAGATTACATTGAGCTC
CGGTGAGATATTCAACGTTGCTAAGAAGAATTCTGAGCTCGTTGTGGCGG
ATCAGAACGGTGACGTTCGTGATAAGGAGACGATTACAATTGAGAAGGAG
AACATTAACGACAACCTACTGGATACTGAACTCTCCTCTGGCAACTAA
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Coding sequence (CDS) from alignment at tig00000855_pilon:272731..273528+

>Ggra8649.t1 ID=Ggra8649.t1|Name=Ggra8649.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=798bp|location=Sequence derived from alignment at tig00000855_pilon:272731..273528+ (Gracilaria gracilis GNS1m male)
ATGGCTAGCGCTTTCCTCCTGTCTGTTGCTTGTGCTTCTCCTATGTTCTC
TCCTGCGCAAAATATAGTTGATGATATCATTCATGGAAAAGGGAGAATGT
CGCCGTCGGGCACTGACTTGCTATACACTTCGGACAGACCGATCGCTCCC
AGTATTGAACAGGCAGCGGGCATTCAGAGATCGAGGCTGGGATACGTTCA
GACAACAGGTGTCGTGACAGGCTTCACTTTGCCGAGAAGTAGACAAATCG
TCGTGAAGGCCATCATGAACGGTTCTGTTTCGTTCGAAGGCAAGCTTGCC
AGTGACATCGAAGATGAGACGGATAAGCTTGTAAGCGAGTACTCGCAATC
GTTTCAGGACTTCTACAGGCGTGAGAAAGAGAGCATGAAGGCGAGGGCCG
GTGGCGGATATTTCTGTTTCTTCCAGGCCGCAGCCAACTATGGATACTCC
GATGATCAGATCACGCGGGAAACTCTGGAAGATGGCGAGTTTCGAGACTT
CCGTGACAGGGCCAGCGCCATGTTGGCTTCGCAGTCGACTTCCACTTTGT
CGGCCAACTTCAGCGTGGAGATCGAAGGTAGGTCGGAGGGATACCGCGAG
ACCATAACTGTTTTCGGTTACGTGTATATCAACCAGATTACATTGAGCTC
CGGTGAGATATTCAACGTTGCTAAGAAGAATTCTGAGCTCGTTGTGGCGG
ATCAGAACGGTGACGTTCGTGATAAGGAGACGATTACAATTGAGAAGGAG
AACATTAACGACAACCTACTGGATACTGAACTCTCCTCTGGCAACTAA
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