Ggra8643.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8643.t1
Unique NameGgra8643.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length148
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000855_piloncontigtig00000855_pilon:148379..148822 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8643Ggra8643Gracilaria gracilis GNS1m malegenetig00000855_pilon 148379..148822 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8643.t1.start1Ggra8643.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000855_pilon 148379..148381 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8643.t1.CDS1Ggra8643.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000855_pilon 148379..148822 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8643.t1.exon1Ggra8643.t1.exon1Gracilaria gracilis GNS1m maleexontig00000855_pilon 148379..148822 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8643.t1.stop1Ggra8643.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000855_pilon 148820..148822 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8643.t1Ggra8643.t1Gracilaria gracilis GNS1m malepolypeptidetig00000855_pilon 148379..148822 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8643.t1 ID=Ggra8643.t1|Name=Ggra8643.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=148bp
MKEVGYGDGHQQSTSMKEIFAATTELAEKDHLIKRTVKRWQKKFTQEYSG
CIAKISQSGRDADDENLFNKPYFFAETHELENGRATHDPPAVLVSATDAM
PATTPLTSICKRARVANHSTLESFFVDRKEKQHQFLEHLNRAEDRDK*
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spliced messenger RNA

>Ggra8643.t1 ID=Ggra8643.t1|Name=Ggra8643.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=444bp|location=Sequence derived from alignment at tig00000855_pilon:148379..148822+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGGAAGTCGGCTACGGAGACGGGCACCAGCAAAGCACGTCTATGAA
AGAAATCTTCGCTGCCACCACGGAACTCGCCGAGAAAGACCATTTAATAA
AGAGAACTGTGAAAAGATGGCAGAAGAAATTTACTCAAGAGTATTCTGGC
TGTATTGCTAAGATCAGCCAATCTGGGAGAGATGCTGACGATGAAAACCT
TTTCAACAAGCCATACTTCTTTGCAGAAACGCATGAGTTGGAAAACGGAA
GGGCAACGCATGATCCTCCTGCTGTGCTGGTCTCGGCCACTGACGCGATG
CCGGCCACGACGCCTTTGACGAGCATTTGCAAGCGCGCCCGTGTGGCTAA
TCACTCGACCCTTGAAAGCTTTTTTGTGGACCGGAAAGAAAAACAACACC
AATTTCTCGAACACCTTAATCGAGCTGAGGATCGTGACAAATAA
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protein sequence of Ggra8643.t1

>Ggra8643.t1 ID=Ggra8643.t1|Name=Ggra8643.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=148bp
MKEVGYGDGHQQSTSMKEIFAATTELAEKDHLIKRTVKRWQKKFTQEYSG
CIAKISQSGRDADDENLFNKPYFFAETHELENGRATHDPPAVLVSATDAM
PATTPLTSICKRARVANHSTLESFFVDRKEKQHQFLEHLNRAEDRDK*
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mRNA from alignment at tig00000855_pilon:148379..148822+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8643.t1 ID=Ggra8643.t1|Name=Ggra8643.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=444bp|location=Sequence derived from alignment at tig00000855_pilon:148379..148822+ (Gracilaria gracilis GNS1m male)
ATGAAGGAAGTCGGCTACGGAGACGGGCACCAGCAAAGCACGTCTATGAA
AGAAATCTTCGCTGCCACCACGGAACTCGCCGAGAAAGACCATTTAATAA
AGAGAACTGTGAAAAGATGGCAGAAGAAATTTACTCAAGAGTATTCTGGC
TGTATTGCTAAGATCAGCCAATCTGGGAGAGATGCTGACGATGAAAACCT
TTTCAACAAGCCATACTTCTTTGCAGAAACGCATGAGTTGGAAAACGGAA
GGGCAACGCATGATCCTCCTGCTGTGCTGGTCTCGGCCACTGACGCGATG
CCGGCCACGACGCCTTTGACGAGCATTTGCAAGCGCGCCCGTGTGGCTAA
TCACTCGACCCTTGAAAGCTTTTTTGTGGACCGGAAAGAAAAACAACACC
AATTTCTCGAACACCTTAATCGAGCTGAGGATCGTGACAAATAA
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Coding sequence (CDS) from alignment at tig00000855_pilon:148379..148822+

>Ggra8643.t1 ID=Ggra8643.t1|Name=Ggra8643.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=444bp|location=Sequence derived from alignment at tig00000855_pilon:148379..148822+ (Gracilaria gracilis GNS1m male)
ATGAAGGAAGTCGGCTACGGAGACGGGCACCAGCAAAGCACGTCTATGAA
AGAAATCTTCGCTGCCACCACGGAACTCGCCGAGAAAGACCATTTAATAA
AGAGAACTGTGAAAAGATGGCAGAAGAAATTTACTCAAGAGTATTCTGGC
TGTATTGCTAAGATCAGCCAATCTGGGAGAGATGCTGACGATGAAAACCT
TTTCAACAAGCCATACTTCTTTGCAGAAACGCATGAGTTGGAAAACGGAA
GGGCAACGCATGATCCTCCTGCTGTGCTGGTCTCGGCCACTGACGCGATG
CCGGCCACGACGCCTTTGACGAGCATTTGCAAGCGCGCCCGTGTGGCTAA
TCACTCGACCCTTGAAAGCTTTTTTGTGGACCGGAAAGAAAAACAACACC
AATTTCTCGAACACCTTAATCGAGCTGAGGATCGTGACAAATAA
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