Ggra8641.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8641.t1
Unique NameGgra8641.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length252
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000855_piloncontigtig00000855_pilon:59330..60085 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8641Ggra8641Gracilaria gracilis GNS1m malegenetig00000855_pilon 59330..60085 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8641.t1.start1Ggra8641.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000855_pilon 59330..59332 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8641.t1.CDS1Ggra8641.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000855_pilon 59330..60085 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8641.t1.exon1Ggra8641.t1.exon1Gracilaria gracilis GNS1m maleexontig00000855_pilon 59330..60085 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8641.t1.stop1Ggra8641.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000855_pilon 60083..60085 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8641.t1Ggra8641.t1Gracilaria gracilis GNS1m malepolypeptidetig00000855_pilon 59330..60085 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8641.t1 ID=Ggra8641.t1|Name=Ggra8641.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=252bp
MSHRGQLGSFLKDSLQKLQTVVEQIDAAQTNAAHNDAEQSTRARHETAQP
SPPPPHSNADEQTKARIISAHKQVCMMLLASTPAQIPLLNLLDSGVVETY
WACVEDLLLLVQNLPDFPKHSSRQEQLRFVETHCSQICSRNGVHVDCQVV
VGSLVCVRETYPSYQVMLKMYHEDMEKQCAQLSQIKQEQETAATQNVSRL
QMQQSRLQAEQMRRDAIMRSHEQRMTQIGQLMGSTPLYYQNGVAHYGGIN
F*
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spliced messenger RNA

>Ggra8641.t1 ID=Ggra8641.t1|Name=Ggra8641.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=756bp|location=Sequence derived from alignment at tig00000855_pilon:59330..60085+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCCACCGTGGTCAACTAGGAAGTTTTCTCAAAGATTCGCTTCAAAA
GCTACAAACCGTTGTCGAACAAATCGACGCGGCCCAAACCAATGCCGCTC
ACAACGATGCTGAACAATCGACTCGCGCGAGGCACGAAACGGCTCAGCCA
TCACCTCCACCGCCACATTCCAATGCGGACGAACAAACCAAGGCTCGTAT
TATCTCTGCGCACAAGCAGGTCTGCATGATGCTTCTGGCTTCTACTCCGG
CTCAGATCCCGCTCCTCAACTTGCTGGACTCGGGCGTTGTTGAGACGTAC
TGGGCATGTGTGGAGGACTTGCTGCTTCTCGTTCAAAATTTACCCGACTT
TCCCAAACACTCGAGCAGACAAGAACAACTGCGCTTTGTGGAAACGCATT
GTAGCCAGATATGCTCTCGCAATGGCGTTCACGTTGATTGCCAAGTTGTG
GTAGGCAGTTTGGTATGCGTGAGGGAAACCTATCCTAGTTATCAAGTCAT
GTTGAAAATGTATCATGAAGATATGGAAAAACAATGCGCGCAACTGAGTC
AAATCAAACAGGAGCAAGAAACGGCCGCTACGCAGAATGTGAGCCGCTTG
CAGATGCAGCAATCCCGCTTGCAAGCAGAACAAATGCGGCGGGACGCAAT
CATGAGATCCCACGAACAACGGATGACCCAAATTGGTCAATTGATGGGTT
CCACTCCTTTGTATTACCAGAATGGCGTAGCTCACTATGGCGGAATTAAT
TTTTGA
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protein sequence of Ggra8641.t1

>Ggra8641.t1 ID=Ggra8641.t1|Name=Ggra8641.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=252bp
MSHRGQLGSFLKDSLQKLQTVVEQIDAAQTNAAHNDAEQSTRARHETAQP
SPPPPHSNADEQTKARIISAHKQVCMMLLASTPAQIPLLNLLDSGVVETY
WACVEDLLLLVQNLPDFPKHSSRQEQLRFVETHCSQICSRNGVHVDCQVV
VGSLVCVRETYPSYQVMLKMYHEDMEKQCAQLSQIKQEQETAATQNVSRL
QMQQSRLQAEQMRRDAIMRSHEQRMTQIGQLMGSTPLYYQNGVAHYGGIN
F*
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mRNA from alignment at tig00000855_pilon:59330..60085+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8641.t1 ID=Ggra8641.t1|Name=Ggra8641.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=756bp|location=Sequence derived from alignment at tig00000855_pilon:59330..60085+ (Gracilaria gracilis GNS1m male)
ATGAGCCACCGTGGTCAACTAGGAAGTTTTCTCAAAGATTCGCTTCAAAA
GCTACAAACCGTTGTCGAACAAATCGACGCGGCCCAAACCAATGCCGCTC
ACAACGATGCTGAACAATCGACTCGCGCGAGGCACGAAACGGCTCAGCCA
TCACCTCCACCGCCACATTCCAATGCGGACGAACAAACCAAGGCTCGTAT
TATCTCTGCGCACAAGCAGGTCTGCATGATGCTTCTGGCTTCTACTCCGG
CTCAGATCCCGCTCCTCAACTTGCTGGACTCGGGCGTTGTTGAGACGTAC
TGGGCATGTGTGGAGGACTTGCTGCTTCTCGTTCAAAATTTACCCGACTT
TCCCAAACACTCGAGCAGACAAGAACAACTGCGCTTTGTGGAAACGCATT
GTAGCCAGATATGCTCTCGCAATGGCGTTCACGTTGATTGCCAAGTTGTG
GTAGGCAGTTTGGTATGCGTGAGGGAAACCTATCCTAGTTATCAAGTCAT
GTTGAAAATGTATCATGAAGATATGGAAAAACAATGCGCGCAACTGAGTC
AAATCAAACAGGAGCAAGAAACGGCCGCTACGCAGAATGTGAGCCGCTTG
CAGATGCAGCAATCCCGCTTGCAAGCAGAACAAATGCGGCGGGACGCAAT
CATGAGATCCCACGAACAACGGATGACCCAAATTGGTCAATTGATGGGTT
CCACTCCTTTGTATTACCAGAATGGCGTAGCTCACTATGGCGGAATTAAT
TTTTGA
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Coding sequence (CDS) from alignment at tig00000855_pilon:59330..60085+

>Ggra8641.t1 ID=Ggra8641.t1|Name=Ggra8641.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=756bp|location=Sequence derived from alignment at tig00000855_pilon:59330..60085+ (Gracilaria gracilis GNS1m male)
ATGAGCCACCGTGGTCAACTAGGAAGTTTTCTCAAAGATTCGCTTCAAAA
GCTACAAACCGTTGTCGAACAAATCGACGCGGCCCAAACCAATGCCGCTC
ACAACGATGCTGAACAATCGACTCGCGCGAGGCACGAAACGGCTCAGCCA
TCACCTCCACCGCCACATTCCAATGCGGACGAACAAACCAAGGCTCGTAT
TATCTCTGCGCACAAGCAGGTCTGCATGATGCTTCTGGCTTCTACTCCGG
CTCAGATCCCGCTCCTCAACTTGCTGGACTCGGGCGTTGTTGAGACGTAC
TGGGCATGTGTGGAGGACTTGCTGCTTCTCGTTCAAAATTTACCCGACTT
TCCCAAACACTCGAGCAGACAAGAACAACTGCGCTTTGTGGAAACGCATT
GTAGCCAGATATGCTCTCGCAATGGCGTTCACGTTGATTGCCAAGTTGTG
GTAGGCAGTTTGGTATGCGTGAGGGAAACCTATCCTAGTTATCAAGTCAT
GTTGAAAATGTATCATGAAGATATGGAAAAACAATGCGCGCAACTGAGTC
AAATCAAACAGGAGCAAGAAACGGCCGCTACGCAGAATGTGAGCCGCTTG
CAGATGCAGCAATCCCGCTTGCAAGCAGAACAAATGCGGCGGGACGCAAT
CATGAGATCCCACGAACAACGGATGACCCAAATTGGTCAATTGATGGGTT
CCACTCCTTTGTATTACCAGAATGGCGTAGCTCACTATGGCGGAATTAAT
TTTTGA
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