Ggra853.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra853.t1
Unique NameGgra853.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length141
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000178_piloncontigtig00000178_pilon:156892..157314 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra853Ggra853Gracilaria gracilis GNS1m malegenetig00000178_pilon 156892..157314 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra853.t1.start1Ggra853.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000178_pilon 156892..156894 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra853.t1.CDS1Ggra853.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000178_pilon 156892..157314 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra853.t1.exon1Ggra853.t1.exon1Gracilaria gracilis GNS1m maleexontig00000178_pilon 156892..157314 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra853.t1.stop1Ggra853.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000178_pilon 157312..157314 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra853.t1Ggra853.t1Gracilaria gracilis GNS1m malepolypeptidetig00000178_pilon 156892..157314 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra853.t1 ID=Ggra853.t1|Name=Ggra853.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=141bp
LLALKKQLGLALICGRHAYQKRDTEAVKQARLSALLRNHQASLLADRNDA
PRLLDDVNACVAVFNDVLPQHPAPPALRCAIQHLMSAAELARVNLFGPIV
PFNAVYLDDDEAKSVTFCEWSLADDLDAQLNTLVEREQLL*
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spliced messenger RNA

>Ggra853.t1 ID=Ggra853.t1|Name=Ggra853.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=423bp|location=Sequence derived from alignment at tig00000178_pilon:156892..157314+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
TTGCTCGCGCTCAAGAAGCAGCTGGGCCTCGCGCTCATCTGCGGCAGACA
CGCATACCAGAAACGCGACACTGAAGCCGTCAAGCAGGCCAGGCTGTCTG
CCTTGCTCAGAAATCATCAGGCGTCGTTGTTGGCGGATCGCAACGATGCT
CCCAGGCTTCTGGATGACGTCAACGCCTGTGTGGCCGTCTTCAACGACGT
GCTGCCGCAGCACCCCGCCCCACCCGCGCTACGCTGCGCCATTCAGCACC
TCATGTCGGCCGCAGAGCTAGCGCGCGTCAACCTCTTCGGACCCATCGTG
CCCTTTAACGCCGTCTACCTTGACGACGACGAAGCCAAGAGCGTCACATT
CTGCGAATGGTCGCTGGCCGATGATCTGGATGCACAGCTCAATACGCTTG
TCGAGCGTGAGCAGCTACTCTAG
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protein sequence of Ggra853.t1

>Ggra853.t1 ID=Ggra853.t1|Name=Ggra853.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=141bp
LLALKKQLGLALICGRHAYQKRDTEAVKQARLSALLRNHQASLLADRNDA
PRLLDDVNACVAVFNDVLPQHPAPPALRCAIQHLMSAAELARVNLFGPIV
PFNAVYLDDDEAKSVTFCEWSLADDLDAQLNTLVEREQLL*
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mRNA from alignment at tig00000178_pilon:156892..157314+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra853.t1 ID=Ggra853.t1|Name=Ggra853.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=423bp|location=Sequence derived from alignment at tig00000178_pilon:156892..157314+ (Gracilaria gracilis GNS1m male)
TTGCTCGCGCTCAAGAAGCAGCTGGGCCTCGCGCTCATCTGCGGCAGACA
CGCATACCAGAAACGCGACACTGAAGCCGTCAAGCAGGCCAGGCTGTCTG
CCTTGCTCAGAAATCATCAGGCGTCGTTGTTGGCGGATCGCAACGATGCT
CCCAGGCTTCTGGATGACGTCAACGCCTGTGTGGCCGTCTTCAACGACGT
GCTGCCGCAGCACCCCGCCCCACCCGCGCTACGCTGCGCCATTCAGCACC
TCATGTCGGCCGCAGAGCTAGCGCGCGTCAACCTCTTCGGACCCATCGTG
CCCTTTAACGCCGTCTACCTTGACGACGACGAAGCCAAGAGCGTCACATT
CTGCGAATGGTCGCTGGCCGATGATCTGGATGCACAGCTCAATACGCTTG
TCGAGCGTGAGCAGCTACTCTAG
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Coding sequence (CDS) from alignment at tig00000178_pilon:156892..157314+

>Ggra853.t1 ID=Ggra853.t1|Name=Ggra853.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=423bp|location=Sequence derived from alignment at tig00000178_pilon:156892..157314+ (Gracilaria gracilis GNS1m male)
TTGCTCGCGCTCAAGAAGCAGCTGGGCCTCGCGCTCATCTGCGGCAGACA
CGCATACCAGAAACGCGACACTGAAGCCGTCAAGCAGGCCAGGCTGTCTG
CCTTGCTCAGAAATCATCAGGCGTCGTTGTTGGCGGATCGCAACGATGCT
CCCAGGCTTCTGGATGACGTCAACGCCTGTGTGGCCGTCTTCAACGACGT
GCTGCCGCAGCACCCCGCCCCACCCGCGCTACGCTGCGCCATTCAGCACC
TCATGTCGGCCGCAGAGCTAGCGCGCGTCAACCTCTTCGGACCCATCGTG
CCCTTTAACGCCGTCTACCTTGACGACGACGAAGCCAAGAGCGTCACATT
CTGCGAATGGTCGCTGGCCGATGATCTGGATGCACAGCTCAATACGCTTG
TCGAGCGTGAGCAGCTACTCTAG
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