Ggra8514.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8514.t1
Unique NameGgra8514.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length252
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:975979..976734 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8514Ggra8514Gracilaria gracilis GNS1m malegenetig00000041_pilon 975979..976734 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8514.t1.stop1Ggra8514.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000041_pilon 975979..975981 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8514.t1.CDS1Ggra8514.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000041_pilon 975979..976734 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8514.t1.exon1Ggra8514.t1.exon1Gracilaria gracilis GNS1m maleexontig00000041_pilon 975979..976734 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8514.t1.start1Ggra8514.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000041_pilon 976732..976734 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8514.t1Ggra8514.t1Gracilaria gracilis GNS1m malepolypeptidetig00000041_pilon 975979..976734 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8514.t1 ID=Ggra8514.t1|Name=Ggra8514.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=252bp
MESAWARQSDKETYFRLEAIMNEPRQGYSRKIQTFTAVLKETETVNSILM
KHISQPGRGKHAVEIPKNPERVLYDAGQPAEWVTHGEEMARRKAEAEAMQ
RQAEEKENRKAEKVEQRAKEREDAEKASIEKKNKRLMEQLHRDAETKKRD
IRALQKNRKRATEQERKRELVARKKRATGLGKAVALAARGRKGVGLKARR
RKRATPVRVFQFTTLLVLEVVDMAVEIVEGDKFVPDPAAERLSKTLEEST
V*
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spliced messenger RNA

>Ggra8514.t1 ID=Ggra8514.t1|Name=Ggra8514.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=756bp|location=Sequence derived from alignment at tig00000041_pilon:975979..976734- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAAAGTGCGTGGGCGAGGCAATCGGATAAGGAAACGTACTTTAGATT
GGAGGCCATTATGAATGAACCCAGGCAGGGGTACTCACGTAAGATCCAGA
CGTTCACCGCTGTATTGAAAGAAACGGAAACAGTCAACTCAATTCTTATG
AAACACATATCGCAACCCGGACGCGGAAAACATGCAGTGGAGATACCAAA
GAATCCGGAGCGCGTATTGTACGATGCCGGTCAACCGGCTGAGTGGGTGA
CACACGGGGAGGAGATGGCTCGCAGAAAAGCCGAAGCGGAGGCTATGCAG
CGTCAAGCCGAAGAGAAAGAAAATCGGAAGGCCGAAAAAGTTGAACAGCG
TGCGAAGGAACGGGAAGATGCAGAAAAGGCGTCCATTGAAAAGAAAAACA
AACGCCTTATGGAGCAGCTTCATCGAGATGCTGAGACCAAGAAACGTGAC
ATTAGAGCTTTGCAGAAGAACCGTAAACGCGCAACTGAGCAGGAGCGCAA
GCGTGAATTAGTAGCCAGGAAGAAACGCGCTACAGGTTTGGGGAAGGCTG
TGGCTTTAGCTGCTCGAGGAAGGAAAGGCGTTGGTCTGAAGGCACGCAGG
AGGAAGCGAGCCACGCCAGTTCGCGTGTTTCAGTTCACTACCTTACTCGT
TCTCGAAGTTGTAGATATGGCAGTGGAGATTGTGGAGGGAGACAAGTTTG
TCCCAGATCCAGCCGCGGAGCGCCTTTCAAAAACGCTCGAAGAGAGCACA
GTGTGA
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protein sequence of Ggra8514.t1

>Ggra8514.t1 ID=Ggra8514.t1|Name=Ggra8514.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=252bp
MESAWARQSDKETYFRLEAIMNEPRQGYSRKIQTFTAVLKETETVNSILM
KHISQPGRGKHAVEIPKNPERVLYDAGQPAEWVTHGEEMARRKAEAEAMQ
RQAEEKENRKAEKVEQRAKEREDAEKASIEKKNKRLMEQLHRDAETKKRD
IRALQKNRKRATEQERKRELVARKKRATGLGKAVALAARGRKGVGLKARR
RKRATPVRVFQFTTLLVLEVVDMAVEIVEGDKFVPDPAAERLSKTLEEST
V*
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mRNA from alignment at tig00000041_pilon:975979..976734-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8514.t1 ID=Ggra8514.t1|Name=Ggra8514.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=756bp|location=Sequence derived from alignment at tig00000041_pilon:975979..976734- (Gracilaria gracilis GNS1m male)
ATGGAAAGTGCGTGGGCGAGGCAATCGGATAAGGAAACGTACTTTAGATT
GGAGGCCATTATGAATGAACCCAGGCAGGGGTACTCACGTAAGATCCAGA
CGTTCACCGCTGTATTGAAAGAAACGGAAACAGTCAACTCAATTCTTATG
AAACACATATCGCAACCCGGACGCGGAAAACATGCAGTGGAGATACCAAA
GAATCCGGAGCGCGTATTGTACGATGCCGGTCAACCGGCTGAGTGGGTGA
CACACGGGGAGGAGATGGCTCGCAGAAAAGCCGAAGCGGAGGCTATGCAG
CGTCAAGCCGAAGAGAAAGAAAATCGGAAGGCCGAAAAAGTTGAACAGCG
TGCGAAGGAACGGGAAGATGCAGAAAAGGCGTCCATTGAAAAGAAAAACA
AACGCCTTATGGAGCAGCTTCATCGAGATGCTGAGACCAAGAAACGTGAC
ATTAGAGCTTTGCAGAAGAACCGTAAACGCGCAACTGAGCAGGAGCGCAA
GCGTGAATTAGTAGCCAGGAAGAAACGCGCTACAGGTTTGGGGAAGGCTG
TGGCTTTAGCTGCTCGAGGAAGGAAAGGCGTTGGTCTGAAGGCACGCAGG
AGGAAGCGAGCCACGCCAGTTCGCGTGTTTCAGTTCACTACCTTACTCGT
TCTCGAAGTTGTAGATATGGCAGTGGAGATTGTGGAGGGAGACAAGTTTG
TCCCAGATCCAGCCGCGGAGCGCCTTTCAAAAACGCTCGAAGAGAGCACA
GTGTGA
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Coding sequence (CDS) from alignment at tig00000041_pilon:975979..976734-

>Ggra8514.t1 ID=Ggra8514.t1|Name=Ggra8514.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=756bp|location=Sequence derived from alignment at tig00000041_pilon:975979..976734- (Gracilaria gracilis GNS1m male)
ATGGAAAGTGCGTGGGCGAGGCAATCGGATAAGGAAACGTACTTTAGATT
GGAGGCCATTATGAATGAACCCAGGCAGGGGTACTCACGTAAGATCCAGA
CGTTCACCGCTGTATTGAAAGAAACGGAAACAGTCAACTCAATTCTTATG
AAACACATATCGCAACCCGGACGCGGAAAACATGCAGTGGAGATACCAAA
GAATCCGGAGCGCGTATTGTACGATGCCGGTCAACCGGCTGAGTGGGTGA
CACACGGGGAGGAGATGGCTCGCAGAAAAGCCGAAGCGGAGGCTATGCAG
CGTCAAGCCGAAGAGAAAGAAAATCGGAAGGCCGAAAAAGTTGAACAGCG
TGCGAAGGAACGGGAAGATGCAGAAAAGGCGTCCATTGAAAAGAAAAACA
AACGCCTTATGGAGCAGCTTCATCGAGATGCTGAGACCAAGAAACGTGAC
ATTAGAGCTTTGCAGAAGAACCGTAAACGCGCAACTGAGCAGGAGCGCAA
GCGTGAATTAGTAGCCAGGAAGAAACGCGCTACAGGTTTGGGGAAGGCTG
TGGCTTTAGCTGCTCGAGGAAGGAAAGGCGTTGGTCTGAAGGCACGCAGG
AGGAAGCGAGCCACGCCAGTTCGCGTGTTTCAGTTCACTACCTTACTCGT
TCTCGAAGTTGTAGATATGGCAGTGGAGATTGTGGAGGGAGACAAGTTTG
TCCCAGATCCAGCCGCGGAGCGCCTTTCAAAAACGCTCGAAGAGAGCACA
GTGTGA
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