Ggra8502.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8502.t1
Unique NameGgra8502.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length346
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:908041..909078 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8502Ggra8502Gracilaria gracilis GNS1m malegenetig00000041_pilon 908041..909078 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8502.t1.stop1Ggra8502.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000041_pilon 908041..908043 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8502.t1.CDS1Ggra8502.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000041_pilon 908041..909078 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8502.t1.exon1Ggra8502.t1.exon1Gracilaria gracilis GNS1m maleexontig00000041_pilon 908041..909078 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8502.t1.start1Ggra8502.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000041_pilon 909076..909078 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8502.t1Ggra8502.t1Gracilaria gracilis GNS1m malepolypeptidetig00000041_pilon 908041..909078 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8502.t1 ID=Ggra8502.t1|Name=Ggra8502.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=346bp
MCDHSAAEHGTPPALASSNAFGAFASLPAYEFDFDYRGQSINAAMPPLHA
PSSLLDDFDSYMFPDTDTTHSSSQRSQSSQPSSPSPQPSPASIDWPAVKH
AQLFSPHGAIIDVDKLYTGYCNYSVLIFVPRHAVELCALVYGKLAHLLLQ
VGARLCFITAWQPAQATTFLSRFERVSPCPAAIVCDPHAHLFSAFAFTRS
PIRALFAASKVSAPMRQGMRNAFSTVSYRAQNRDIANTPVPSKRLKCGAV
VMSTLRGYEKRPCINYINEEHPSTGVGCYLDVLTACGVNEAFVPDVDVAQ
LYARFNNMRATSIKARHADQKEANRLKNNRIRGSRKNDLRNALKG*
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spliced messenger RNA

>Ggra8502.t1 ID=Ggra8502.t1|Name=Ggra8502.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1038bp|location=Sequence derived from alignment at tig00000041_pilon:908041..909078- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGCGACCACAGCGCCGCGGAACACGGCACGCCGCCTGCGCTCGCGTC
CTCCAACGCCTTTGGCGCCTTCGCGTCGCTGCCTGCGTACGAGTTTGACT
TTGATTACCGAGGCCAATCCATCAACGCCGCCATGCCGCCGTTGCACGCG
CCCTCCTCCCTGCTCGATGACTTTGATTCGTACATGTTTCCCGACACCGA
TACCACCCACTCCTCCTCGCAGCGCTCGCAGTCGTCGCAGCCTTCCTCCC
CGTCGCCGCAGCCGTCGCCCGCCTCCATCGACTGGCCCGCCGTCAAGCAC
GCGCAGCTCTTCTCGCCGCACGGCGCCATCATCGACGTCGACAAGCTCTA
CACCGGCTACTGCAACTACTCCGTGCTCATCTTCGTGCCGCGCCACGCCG
TCGAGCTCTGCGCGCTGGTGTACGGCAAGCTGGCGCACCTGTTGCTGCAG
GTTGGCGCCCGCCTGTGTTTCATCACCGCGTGGCAACCCGCGCAGGCCAC
CACCTTCTTGTCGCGCTTCGAGCGCGTCAGTCCGTGTCCGGCCGCCATTG
TGTGCGACCCACACGCCCACTTGTTCTCCGCGTTTGCCTTCACGCGCTCG
CCGATACGCGCCTTGTTTGCCGCCAGCAAGGTGTCGGCGCCCATGCGCCA
GGGCATGAGGAACGCCTTTAGCACCGTGTCATACCGTGCGCAAAACCGAG
ACATTGCCAACACGCCCGTGCCTTCCAAGCGTCTCAAGTGCGGCGCCGTT
GTCATGAGTACGTTGCGCGGCTATGAGAAACGGCCTTGTATCAATTATAT
CAACGAGGAACATCCGTCCACTGGCGTTGGTTGCTACTTGGACGTGCTCA
CTGCCTGCGGTGTGAACGAAGCCTTTGTTCCGGATGTGGATGTTGCGCAG
CTCTATGCTCGCTTCAATAACATGCGCGCCACCAGTATCAAGGCTAGGCA
TGCCGATCAGAAGGAAGCCAATCGACTCAAGAACAATCGCATCCGTGGCT
CGAGGAAGAATGATTTGCGCAATGCTTTGAAAGGATGA
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protein sequence of Ggra8502.t1

>Ggra8502.t1 ID=Ggra8502.t1|Name=Ggra8502.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=346bp
MCDHSAAEHGTPPALASSNAFGAFASLPAYEFDFDYRGQSINAAMPPLHA
PSSLLDDFDSYMFPDTDTTHSSSQRSQSSQPSSPSPQPSPASIDWPAVKH
AQLFSPHGAIIDVDKLYTGYCNYSVLIFVPRHAVELCALVYGKLAHLLLQ
VGARLCFITAWQPAQATTFLSRFERVSPCPAAIVCDPHAHLFSAFAFTRS
PIRALFAASKVSAPMRQGMRNAFSTVSYRAQNRDIANTPVPSKRLKCGAV
VMSTLRGYEKRPCINYINEEHPSTGVGCYLDVLTACGVNEAFVPDVDVAQ
LYARFNNMRATSIKARHADQKEANRLKNNRIRGSRKNDLRNALKG*
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mRNA from alignment at tig00000041_pilon:908041..909078-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8502.t1 ID=Ggra8502.t1|Name=Ggra8502.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1038bp|location=Sequence derived from alignment at tig00000041_pilon:908041..909078- (Gracilaria gracilis GNS1m male)
ATGTGCGACCACAGCGCCGCGGAACACGGCACGCCGCCTGCGCTCGCGTC
CTCCAACGCCTTTGGCGCCTTCGCGTCGCTGCCTGCGTACGAGTTTGACT
TTGATTACCGAGGCCAATCCATCAACGCCGCCATGCCGCCGTTGCACGCG
CCCTCCTCCCTGCTCGATGACTTTGATTCGTACATGTTTCCCGACACCGA
TACCACCCACTCCTCCTCGCAGCGCTCGCAGTCGTCGCAGCCTTCCTCCC
CGTCGCCGCAGCCGTCGCCCGCCTCCATCGACTGGCCCGCCGTCAAGCAC
GCGCAGCTCTTCTCGCCGCACGGCGCCATCATCGACGTCGACAAGCTCTA
CACCGGCTACTGCAACTACTCCGTGCTCATCTTCGTGCCGCGCCACGCCG
TCGAGCTCTGCGCGCTGGTGTACGGCAAGCTGGCGCACCTGTTGCTGCAG
GTTGGCGCCCGCCTGTGTTTCATCACCGCGTGGCAACCCGCGCAGGCCAC
CACCTTCTTGTCGCGCTTCGAGCGCGTCAGTCCGTGTCCGGCCGCCATTG
TGTGCGACCCACACGCCCACTTGTTCTCCGCGTTTGCCTTCACGCGCTCG
CCGATACGCGCCTTGTTTGCCGCCAGCAAGGTGTCGGCGCCCATGCGCCA
GGGCATGAGGAACGCCTTTAGCACCGTGTCATACCGTGCGCAAAACCGAG
ACATTGCCAACACGCCCGTGCCTTCCAAGCGTCTCAAGTGCGGCGCCGTT
GTCATGAGTACGTTGCGCGGCTATGAGAAACGGCCTTGTATCAATTATAT
CAACGAGGAACATCCGTCCACTGGCGTTGGTTGCTACTTGGACGTGCTCA
CTGCCTGCGGTGTGAACGAAGCCTTTGTTCCGGATGTGGATGTTGCGCAG
CTCTATGCTCGCTTCAATAACATGCGCGCCACCAGTATCAAGGCTAGGCA
TGCCGATCAGAAGGAAGCCAATCGACTCAAGAACAATCGCATCCGTGGCT
CGAGGAAGAATGATTTGCGCAATGCTTTGAAAGGATGA
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Coding sequence (CDS) from alignment at tig00000041_pilon:908041..909078-

>Ggra8502.t1 ID=Ggra8502.t1|Name=Ggra8502.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1038bp|location=Sequence derived from alignment at tig00000041_pilon:908041..909078- (Gracilaria gracilis GNS1m male)
ATGTGCGACCACAGCGCCGCGGAACACGGCACGCCGCCTGCGCTCGCGTC
CTCCAACGCCTTTGGCGCCTTCGCGTCGCTGCCTGCGTACGAGTTTGACT
TTGATTACCGAGGCCAATCCATCAACGCCGCCATGCCGCCGTTGCACGCG
CCCTCCTCCCTGCTCGATGACTTTGATTCGTACATGTTTCCCGACACCGA
TACCACCCACTCCTCCTCGCAGCGCTCGCAGTCGTCGCAGCCTTCCTCCC
CGTCGCCGCAGCCGTCGCCCGCCTCCATCGACTGGCCCGCCGTCAAGCAC
GCGCAGCTCTTCTCGCCGCACGGCGCCATCATCGACGTCGACAAGCTCTA
CACCGGCTACTGCAACTACTCCGTGCTCATCTTCGTGCCGCGCCACGCCG
TCGAGCTCTGCGCGCTGGTGTACGGCAAGCTGGCGCACCTGTTGCTGCAG
GTTGGCGCCCGCCTGTGTTTCATCACCGCGTGGCAACCCGCGCAGGCCAC
CACCTTCTTGTCGCGCTTCGAGCGCGTCAGTCCGTGTCCGGCCGCCATTG
TGTGCGACCCACACGCCCACTTGTTCTCCGCGTTTGCCTTCACGCGCTCG
CCGATACGCGCCTTGTTTGCCGCCAGCAAGGTGTCGGCGCCCATGCGCCA
GGGCATGAGGAACGCCTTTAGCACCGTGTCATACCGTGCGCAAAACCGAG
ACATTGCCAACACGCCCGTGCCTTCCAAGCGTCTCAAGTGCGGCGCCGTT
GTCATGAGTACGTTGCGCGGCTATGAGAAACGGCCTTGTATCAATTATAT
CAACGAGGAACATCCGTCCACTGGCGTTGGTTGCTACTTGGACGTGCTCA
CTGCCTGCGGTGTGAACGAAGCCTTTGTTCCGGATGTGGATGTTGCGCAG
CTCTATGCTCGCTTCAATAACATGCGCGCCACCAGTATCAAGGCTAGGCA
TGCCGATCAGAAGGAAGCCAATCGACTCAAGAACAATCGCATCCGTGGCT
CGAGGAAGAATGATTTGCGCAATGCTTTGAAAGGATGA
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