Ggra846.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra846.t1
Unique NameGgra846.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length350
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000202_piloncontigtig00000202_pilon:86283..87332 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra846Ggra846Gracilaria gracilis GNS1m malegenetig00000202_pilon 86283..87332 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra846.t1.stop1Ggra846.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000202_pilon 86283..86285 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra846.t1.CDS1Ggra846.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000202_pilon 86283..87332 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra846.t1.exon1Ggra846.t1.exon1Gracilaria gracilis GNS1m maleexontig00000202_pilon 86283..87332 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra846.t1.start1Ggra846.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000202_pilon 87330..87332 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra846.t1Ggra846.t1Gracilaria gracilis GNS1m malepolypeptidetig00000202_pilon 86283..87332 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra846.t1 ID=Ggra846.t1|Name=Ggra846.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=350bp
MGRQTSVNGVVVYLSDVLLFSQQVYQMRRMLFVDLPNNAIAITRSSSSSH
AVEKSVREINGSQEVSESQLLELILNNRHKIVGSEFMPANDESWITEGSV
TRERLLQAVLNSGHSVFDASTLVDSCLRENGFNNRAVLEWLSFLRWSKCK
AGLAICYDEKLGKLRIDADGSLIQESGLRYFRSFFSIFSPLEKVEDTSMF
KARTSMNVELESTILASGSPNARRFLDQRNFVFGSENQICYARGSREDFQ
SRSAFLISLIRLTGAAKLTSWFVEVIVPNHVAHVYVRPPRDRERVGNVWT
ASDMSPPEDANQLQSISVALFNNVPPPGYNISGAQVSNEREFGPTAYQG*
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spliced messenger RNA

>Ggra846.t1 ID=Ggra846.t1|Name=Ggra846.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1050bp|location=Sequence derived from alignment at tig00000202_pilon:86283..87332- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTCGACAAACCAGTGTGAACGGCGTCGTTGTGTACCTCAGTGATGT
TTTGCTCTTCTCACAGCAAGTGTACCAAATGAGAAGAATGCTTTTCGTGG
ATCTTCCAAATAACGCTATTGCTATAACACGCAGTTCATCGAGTTCCCAT
GCTGTAGAGAAGTCAGTGAGAGAGATTAACGGCTCACAAGAGGTTTCAGA
ATCTCAACTTTTAGAGCTAATCCTAAACAACAGGCACAAGATCGTAGGGA
GCGAATTTATGCCCGCAAACGATGAGTCCTGGATAACAGAAGGTTCGGTC
ACCAGAGAACGACTTCTGCAGGCAGTGTTGAACAGCGGACATTCCGTATT
TGATGCGTCAACTCTTGTGGATTCATGTCTGAGGGAGAATGGCTTCAATA
ACCGTGCAGTGTTGGAATGGCTATCATTCCTTCGATGGTCAAAATGTAAG
GCAGGTTTGGCTATTTGCTATGACGAAAAGCTTGGAAAACTTCGTATCGA
TGCTGATGGATCATTAATTCAGGAATCCGGTCTTCGCTATTTCCGCTCAT
TCTTCTCAATTTTCTCCCCACTCGAAAAAGTTGAAGATACAAGTATGTTC
AAAGCACGAACTTCGATGAACGTTGAATTGGAGAGTACAATTCTGGCAAG
CGGGTCCCCAAACGCTCGAAGATTCCTTGATCAACGCAACTTTGTGTTTG
GTTCAGAGAATCAGATATGTTACGCGCGAGGATCTAGAGAAGATTTTCAA
AGCCGTTCGGCTTTCCTGATTTCACTTATCCGTCTCACGGGAGCAGCGAA
ATTGACGTCATGGTTTGTAGAGGTCATAGTACCAAACCATGTCGCTCACG
TTTATGTGAGACCCCCAAGAGACCGTGAACGCGTTGGTAACGTATGGACA
GCCTCTGACATGTCTCCTCCCGAGGATGCTAATCAACTTCAATCAATTTC
AGTCGCGCTTTTCAACAATGTCCCCCCTCCGGGGTATAATATCTCAGGAG
CTCAGGTGTCGAACGAAAGAGAATTTGGGCCCACGGCTTACCAGGGGTAA
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protein sequence of Ggra846.t1

>Ggra846.t1 ID=Ggra846.t1|Name=Ggra846.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=350bp
MGRQTSVNGVVVYLSDVLLFSQQVYQMRRMLFVDLPNNAIAITRSSSSSH
AVEKSVREINGSQEVSESQLLELILNNRHKIVGSEFMPANDESWITEGSV
TRERLLQAVLNSGHSVFDASTLVDSCLRENGFNNRAVLEWLSFLRWSKCK
AGLAICYDEKLGKLRIDADGSLIQESGLRYFRSFFSIFSPLEKVEDTSMF
KARTSMNVELESTILASGSPNARRFLDQRNFVFGSENQICYARGSREDFQ
SRSAFLISLIRLTGAAKLTSWFVEVIVPNHVAHVYVRPPRDRERVGNVWT
ASDMSPPEDANQLQSISVALFNNVPPPGYNISGAQVSNEREFGPTAYQG*
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mRNA from alignment at tig00000202_pilon:86283..87332-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra846.t1 ID=Ggra846.t1|Name=Ggra846.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1050bp|location=Sequence derived from alignment at tig00000202_pilon:86283..87332- (Gracilaria gracilis GNS1m male)
ATGGGTCGACAAACCAGTGTGAACGGCGTCGTTGTGTACCTCAGTGATGT
TTTGCTCTTCTCACAGCAAGTGTACCAAATGAGAAGAATGCTTTTCGTGG
ATCTTCCAAATAACGCTATTGCTATAACACGCAGTTCATCGAGTTCCCAT
GCTGTAGAGAAGTCAGTGAGAGAGATTAACGGCTCACAAGAGGTTTCAGA
ATCTCAACTTTTAGAGCTAATCCTAAACAACAGGCACAAGATCGTAGGGA
GCGAATTTATGCCCGCAAACGATGAGTCCTGGATAACAGAAGGTTCGGTC
ACCAGAGAACGACTTCTGCAGGCAGTGTTGAACAGCGGACATTCCGTATT
TGATGCGTCAACTCTTGTGGATTCATGTCTGAGGGAGAATGGCTTCAATA
ACCGTGCAGTGTTGGAATGGCTATCATTCCTTCGATGGTCAAAATGTAAG
GCAGGTTTGGCTATTTGCTATGACGAAAAGCTTGGAAAACTTCGTATCGA
TGCTGATGGATCATTAATTCAGGAATCCGGTCTTCGCTATTTCCGCTCAT
TCTTCTCAATTTTCTCCCCACTCGAAAAAGTTGAAGATACAAGTATGTTC
AAAGCACGAACTTCGATGAACGTTGAATTGGAGAGTACAATTCTGGCAAG
CGGGTCCCCAAACGCTCGAAGATTCCTTGATCAACGCAACTTTGTGTTTG
GTTCAGAGAATCAGATATGTTACGCGCGAGGATCTAGAGAAGATTTTCAA
AGCCGTTCGGCTTTCCTGATTTCACTTATCCGTCTCACGGGAGCAGCGAA
ATTGACGTCATGGTTTGTAGAGGTCATAGTACCAAACCATGTCGCTCACG
TTTATGTGAGACCCCCAAGAGACCGTGAACGCGTTGGTAACGTATGGACA
GCCTCTGACATGTCTCCTCCCGAGGATGCTAATCAACTTCAATCAATTTC
AGTCGCGCTTTTCAACAATGTCCCCCCTCCGGGGTATAATATCTCAGGAG
CTCAGGTGTCGAACGAAAGAGAATTTGGGCCCACGGCTTACCAGGGGTAA
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Coding sequence (CDS) from alignment at tig00000202_pilon:86283..87332-

>Ggra846.t1 ID=Ggra846.t1|Name=Ggra846.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1050bp|location=Sequence derived from alignment at tig00000202_pilon:86283..87332- (Gracilaria gracilis GNS1m male)
ATGGGTCGACAAACCAGTGTGAACGGCGTCGTTGTGTACCTCAGTGATGT
TTTGCTCTTCTCACAGCAAGTGTACCAAATGAGAAGAATGCTTTTCGTGG
ATCTTCCAAATAACGCTATTGCTATAACACGCAGTTCATCGAGTTCCCAT
GCTGTAGAGAAGTCAGTGAGAGAGATTAACGGCTCACAAGAGGTTTCAGA
ATCTCAACTTTTAGAGCTAATCCTAAACAACAGGCACAAGATCGTAGGGA
GCGAATTTATGCCCGCAAACGATGAGTCCTGGATAACAGAAGGTTCGGTC
ACCAGAGAACGACTTCTGCAGGCAGTGTTGAACAGCGGACATTCCGTATT
TGATGCGTCAACTCTTGTGGATTCATGTCTGAGGGAGAATGGCTTCAATA
ACCGTGCAGTGTTGGAATGGCTATCATTCCTTCGATGGTCAAAATGTAAG
GCAGGTTTGGCTATTTGCTATGACGAAAAGCTTGGAAAACTTCGTATCGA
TGCTGATGGATCATTAATTCAGGAATCCGGTCTTCGCTATTTCCGCTCAT
TCTTCTCAATTTTCTCCCCACTCGAAAAAGTTGAAGATACAAGTATGTTC
AAAGCACGAACTTCGATGAACGTTGAATTGGAGAGTACAATTCTGGCAAG
CGGGTCCCCAAACGCTCGAAGATTCCTTGATCAACGCAACTTTGTGTTTG
GTTCAGAGAATCAGATATGTTACGCGCGAGGATCTAGAGAAGATTTTCAA
AGCCGTTCGGCTTTCCTGATTTCACTTATCCGTCTCACGGGAGCAGCGAA
ATTGACGTCATGGTTTGTAGAGGTCATAGTACCAAACCATGTCGCTCACG
TTTATGTGAGACCCCCAAGAGACCGTGAACGCGTTGGTAACGTATGGACA
GCCTCTGACATGTCTCCTCCCGAGGATGCTAATCAACTTCAATCAATTTC
AGTCGCGCTTTTCAACAATGTCCCCCCTCCGGGGTATAATATCTCAGGAG
CTCAGGTGTCGAACGAAAGAGAATTTGGGCCCACGGCTTACCAGGGGTAA
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