Ggra8459.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8459.t1
Unique NameGgra8459.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length244
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:772711..773442 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8459Ggra8459Gracilaria gracilis GNS1m malegenetig00000041_pilon 772711..773442 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8459.t1.start1Ggra8459.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000041_pilon 772711..772713 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8459.t1.CDS1Ggra8459.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000041_pilon 772711..773442 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8459.t1.exon1Ggra8459.t1.exon1Gracilaria gracilis GNS1m maleexontig00000041_pilon 772711..773442 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8459.t1.stop1Ggra8459.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000041_pilon 773440..773442 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8459.t1Ggra8459.t1Gracilaria gracilis GNS1m malepolypeptidetig00000041_pilon 772711..773442 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8459.t1 ID=Ggra8459.t1|Name=Ggra8459.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=244bp
MITAADHEHVHARLSPQRHHSQHRRLHALADAPPPPPVLQQSLQEPRPLE
CHPPDSLPLAALQSEPSSTTDDHSPQSPASSPSPQSHPVSSPSASPHQPT
LVPHDQQPLLLQPPSLHKPPATQPIRVFEDPHPTAPHPHPAHPCAHRPCS
PPVIHHDDKENIPPASMQHALQPHKPPKNTNPNPLKPHKLAVPLSQPGVH
KKRDQPRSPLRDITSAVAANRRSNLFTLRRSPRKKHLTLRYLR*
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spliced messenger RNA

>Ggra8459.t1 ID=Ggra8459.t1|Name=Ggra8459.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=732bp|location=Sequence derived from alignment at tig00000041_pilon:772711..773442+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATCACGGCCGCCGACCACGAGCACGTGCACGCCCGACTCTCGCCGCA
GCGCCATCATTCGCAGCATCGCCGTTTGCACGCGCTTGCAGATGCCCCGC
CGCCGCCGCCCGTGCTGCAGCAATCGCTGCAGGAGCCGCGCCCATTGGAG
TGCCACCCGCCTGACTCGCTTCCGCTTGCCGCTTTGCAGTCCGAGCCTTC
TTCCACTACGGACGACCACTcgccgcagtcgcccgcctcgtcgccgtcgc
cgCAGTCGCACCCCGTTTCGAGCCCGTCCGCTTCGCCGCACCAACCTACT
CTTGTGCCCCACGATCAACAGCCTCTTCTTCTACAGCCCCCGTCACTCCA
CAAACCCCCCGCCACGCAACCCATCCGCGTCTTCGAGGACCCCCACCCAA
CCGCCCCACACCCGCACCCCGCACACCCGTGTGCACACCGCCCGTGTTCA
CCGCCCGTCATTCATCACGATGACAAGGAGAACATCCCTCCTGCGTCCAT
GCAGCACGCGCTTCAACCCCACAAGCCGCCGAAGAACACCAATCCCAATC
CCCTCAAGCCCCACAAGCTTGCAGTGCCTCTGTCTCAACCCGGCGTTCAC
AAGAAGCGTGATCAGCCCCGCTCTCCGTTGCGTGATATCACCTCTGCCGT
GGCCGCCAACCGTCGCTCCAATCTCTTCACGCTTCGTCGCTCTCCGCGCA
AGAAGCACCTCACCTTGAGATATCTCCGTTGA
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protein sequence of Ggra8459.t1

>Ggra8459.t1 ID=Ggra8459.t1|Name=Ggra8459.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=244bp
MITAADHEHVHARLSPQRHHSQHRRLHALADAPPPPPVLQQSLQEPRPLE
CHPPDSLPLAALQSEPSSTTDDHSPQSPASSPSPQSHPVSSPSASPHQPT
LVPHDQQPLLLQPPSLHKPPATQPIRVFEDPHPTAPHPHPAHPCAHRPCS
PPVIHHDDKENIPPASMQHALQPHKPPKNTNPNPLKPHKLAVPLSQPGVH
KKRDQPRSPLRDITSAVAANRRSNLFTLRRSPRKKHLTLRYLR*
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mRNA from alignment at tig00000041_pilon:772711..773442+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8459.t1 ID=Ggra8459.t1|Name=Ggra8459.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=732bp|location=Sequence derived from alignment at tig00000041_pilon:772711..773442+ (Gracilaria gracilis GNS1m male)
ATGATCACGGCCGCCGACCACGAGCACGTGCACGCCCGACTCTCGCCGCA
GCGCCATCATTCGCAGCATCGCCGTTTGCACGCGCTTGCAGATGCCCCGC
CGCCGCCGCCCGTGCTGCAGCAATCGCTGCAGGAGCCGCGCCCATTGGAG
TGCCACCCGCCTGACTCGCTTCCGCTTGCCGCTTTGCAGTCCGAGCCTTC
TTCCACTACGGACGACCACTcgccgcagtcgcccgcctcgtcgccgtcgc
cgCAGTCGCACCCCGTTTCGAGCCCGTCCGCTTCGCCGCACCAACCTACT
CTTGTGCCCCACGATCAACAGCCTCTTCTTCTACAGCCCCCGTCACTCCA
CAAACCCCCCGCCACGCAACCCATCCGCGTCTTCGAGGACCCCCACCCAA
CCGCCCCACACCCGCACCCCGCACACCCGTGTGCACACCGCCCGTGTTCA
CCGCCCGTCATTCATCACGATGACAAGGAGAACATCCCTCCTGCGTCCAT
GCAGCACGCGCTTCAACCCCACAAGCCGCCGAAGAACACCAATCCCAATC
CCCTCAAGCCCCACAAGCTTGCAGTGCCTCTGTCTCAACCCGGCGTTCAC
AAGAAGCGTGATCAGCCCCGCTCTCCGTTGCGTGATATCACCTCTGCCGT
GGCCGCCAACCGTCGCTCCAATCTCTTCACGCTTCGTCGCTCTCCGCGCA
AGAAGCACCTCACCTTGAGATATCTCCGTTGA
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Coding sequence (CDS) from alignment at tig00000041_pilon:772711..773442+

>Ggra8459.t1 ID=Ggra8459.t1|Name=Ggra8459.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=732bp|location=Sequence derived from alignment at tig00000041_pilon:772711..773442+ (Gracilaria gracilis GNS1m male)
ATGATCACGGCCGCCGACCACGAGCACGTGCACGCCCGACTCTCGCCGCA
GCGCCATCATTCGCAGCATCGCCGTTTGCACGCGCTTGCAGATGCCCCGC
CGCCGCCGCCCGTGCTGCAGCAATCGCTGCAGGAGCCGCGCCCATTGGAG
TGCCACCCGCCTGACTCGCTTCCGCTTGCCGCTTTGCAGTCCGAGCCTTC
TTCCACTACGGACGACCACTcgccgcagtcgcccgcctcgtcgccgtcgc
cgCAGTCGCACCCCGTTTCGAGCCCGTCCGCTTCGCCGCACCAACCTACT
CTTGTGCCCCACGATCAACAGCCTCTTCTTCTACAGCCCCCGTCACTCCA
CAAACCCCCCGCCACGCAACCCATCCGCGTCTTCGAGGACCCCCACCCAA
CCGCCCCACACCCGCACCCCGCACACCCGTGTGCACACCGCCCGTGTTCA
CCGCCCGTCATTCATCACGATGACAAGGAGAACATCCCTCCTGCGTCCAT
GCAGCACGCGCTTCAACCCCACAAGCCGCCGAAGAACACCAATCCCAATC
CCCTCAAGCCCCACAAGCTTGCAGTGCCTCTGTCTCAACCCGGCGTTCAC
AAGAAGCGTGATCAGCCCCGCTCTCCGTTGCGTGATATCACCTCTGCCGT
GGCCGCCAACCGTCGCTCCAATCTCTTCACGCTTCGTCGCTCTCCGCGCA
AGAAGCACCTCACCTTGAGATATCTCCGTTGA
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