Ggra8453.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8453.t1
Unique NameGgra8453.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length137
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:765436..765846 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8453Ggra8453Gracilaria gracilis GNS1m malegenetig00000041_pilon 765436..765846 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8453.t1.stop1Ggra8453.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000041_pilon 765436..765438 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8453.t1.CDS1Ggra8453.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000041_pilon 765436..765846 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8453.t1.exon1Ggra8453.t1.exon1Gracilaria gracilis GNS1m maleexontig00000041_pilon 765436..765846 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8453.t1.start1Ggra8453.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000041_pilon 765844..765846 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8453.t1Ggra8453.t1Gracilaria gracilis GNS1m malepolypeptidetig00000041_pilon 765436..765846 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8453.t1 ID=Ggra8453.t1|Name=Ggra8453.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=137bp
MSDSGTSSSSSAMASVWDTLNKMKARQKAAESVNRHTKRYDVARRDAIQL
FERQIELAASQNKFDGVEVLRDMRHAMDTDQNVRAVIDNHKQRFKTLPPA
HELQALSVLLNDASALLASANSCLTNANRIAQPLKR*
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spliced messenger RNA

>Ggra8453.t1 ID=Ggra8453.t1|Name=Ggra8453.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=411bp|location=Sequence derived from alignment at tig00000041_pilon:765436..765846- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGGACAGTGGAACGTCGTCGTCGTCGTCGGCGATGGCGTCCGTGTG
GGACACGTTGAACAAGATGAAGGCCAGACAAAAGGCCGCCGAGAGTGTCA
ATCGCCACACCAAACGCTACGACGTTGCCAGAAGGGACGCCATCCAGCTA
TTCGAGCGACAGATCGAGCTCGCCGCCTCGCAAAACAAGTTTGACGGTGT
CGAGGTGCTTCGCGATATGCGCCACGCCATGGACACCGACCAAAACGTGC
GCGCCGTCATCGACAATCACAAACAGCGCTTCAAGACGCTGCCGCCCGCC
CACGAGCTGCAAGCCCTCTCCGTGCTTTTGAATGATGCTTCCGCTTTGCT
TGCGAGTGCCAACTCCTGTCTTACCAACGCCAATCGCATCGCACAGCCGC
TCAAGCGCTAG
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protein sequence of Ggra8453.t1

>Ggra8453.t1 ID=Ggra8453.t1|Name=Ggra8453.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=137bp
MSDSGTSSSSSAMASVWDTLNKMKARQKAAESVNRHTKRYDVARRDAIQL
FERQIELAASQNKFDGVEVLRDMRHAMDTDQNVRAVIDNHKQRFKTLPPA
HELQALSVLLNDASALLASANSCLTNANRIAQPLKR*
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mRNA from alignment at tig00000041_pilon:765436..765846-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8453.t1 ID=Ggra8453.t1|Name=Ggra8453.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=411bp|location=Sequence derived from alignment at tig00000041_pilon:765436..765846- (Gracilaria gracilis GNS1m male)
ATGTCGGACAGTGGAACGTCGTCGTCGTCGTCGGCGATGGCGTCCGTGTG
GGACACGTTGAACAAGATGAAGGCCAGACAAAAGGCCGCCGAGAGTGTCA
ATCGCCACACCAAACGCTACGACGTTGCCAGAAGGGACGCCATCCAGCTA
TTCGAGCGACAGATCGAGCTCGCCGCCTCGCAAAACAAGTTTGACGGTGT
CGAGGTGCTTCGCGATATGCGCCACGCCATGGACACCGACCAAAACGTGC
GCGCCGTCATCGACAATCACAAACAGCGCTTCAAGACGCTGCCGCCCGCC
CACGAGCTGCAAGCCCTCTCCGTGCTTTTGAATGATGCTTCCGCTTTGCT
TGCGAGTGCCAACTCCTGTCTTACCAACGCCAATCGCATCGCACAGCCGC
TCAAGCGCTAG
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Coding sequence (CDS) from alignment at tig00000041_pilon:765436..765846-

>Ggra8453.t1 ID=Ggra8453.t1|Name=Ggra8453.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=411bp|location=Sequence derived from alignment at tig00000041_pilon:765436..765846- (Gracilaria gracilis GNS1m male)
ATGTCGGACAGTGGAACGTCGTCGTCGTCGTCGGCGATGGCGTCCGTGTG
GGACACGTTGAACAAGATGAAGGCCAGACAAAAGGCCGCCGAGAGTGTCA
ATCGCCACACCAAACGCTACGACGTTGCCAGAAGGGACGCCATCCAGCTA
TTCGAGCGACAGATCGAGCTCGCCGCCTCGCAAAACAAGTTTGACGGTGT
CGAGGTGCTTCGCGATATGCGCCACGCCATGGACACCGACCAAAACGTGC
GCGCCGTCATCGACAATCACAAACAGCGCTTCAAGACGCTGCCGCCCGCC
CACGAGCTGCAAGCCCTCTCCGTGCTTTTGAATGATGCTTCCGCTTTGCT
TGCGAGTGCCAACTCCTGTCTTACCAACGCCAATCGCATCGCACAGCCGC
TCAAGCGCTAG
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