Ggra8295.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8295.t1
Unique NameGgra8295.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length373
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000958_piloncontigtig00000958_pilon:12970..14088 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8295Ggra8295Gracilaria gracilis GNS1m malegenetig00000958_pilon 12970..14088 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8295.t1.stop1Ggra8295.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000958_pilon 12970..12972 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8295.t1.CDS1Ggra8295.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000958_pilon 12970..14088 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8295.t1.exon1Ggra8295.t1.exon1Gracilaria gracilis GNS1m maleexontig00000958_pilon 12970..14088 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8295.t1.start1Ggra8295.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000958_pilon 14086..14088 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8295.t1Ggra8295.t1Gracilaria gracilis GNS1m malepolypeptidetig00000958_pilon 12970..14088 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8295.t1 ID=Ggra8295.t1|Name=Ggra8295.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=373bp
MTLAATEGVGSPEKTNVGVGNTSNGLTVTITETSGDTGNMTSGVTVGKNR
SKADTGVASALEAVGEALREAVTTPRLPFAAILGSTSAVAPTSIVGNNGS
IALPAGVVEMIPELVVLGDGEGRGVTLWLASGKVTSDVADALFAGVMSDS
SEAVTHESSGWRSSVCGEDNSPGSKICVDIGSTPNDTVDACTSSAASVLL
GLLTNGVISALAIGEADMKLGKTVIPRDGEVDDVKEPANTDSDGVAESGL
PAGAELEAAADEVTPDAMIVAVAAIGVDDSVPRGVTDGLASGKDASDIVG
SGEKEIPGIGISDETGVPYMGVGVTDMISASLEGATTSVLLPDGDNVGVE
EGKATIVADAPGTGVTLKLAGL*
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spliced messenger RNA

>Ggra8295.t1 ID=Ggra8295.t1|Name=Ggra8295.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1119bp|location=Sequence derived from alignment at tig00000958_pilon:12970..14088- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACGCTCGCAGCCACCGAAGGAGTGGGCTCTCCCGAGAAAACAAATGT
TGGCGTGGGCAACACATCCAACGGGCTCACAGTCACCATTACCGAGACTT
CAGGCGACACAGGAAACATGACCTCCGGCGTTACAGTCGGCAAGAACAGA
AGCAAAGCAGACACTGGGGTCGCTTCCGCACTTGAAGCAGTCGGAGAAGC
GCTGAGAGAAGCGGTGACTACCCCACGCCTGCCATTTGCTGCCATACTTG
GGAGCACATCTGCAGTGGCACCGACTTCCATTGTCGGCAATAATGGCTCC
ATCGCACTCCCCGCCGGGGTCGTCGAGATGATACCAGAACTTGTTGTACT
CGGAGACGGGGAGGGGCGTGGAGTAACGCTTTGGCTCGCCTCGGGAAAGG
TAACCTCGGATGTGGCAGATGCACTCTTTGCCGGTGTGATGTCCGACTCA
AGCGAAGCCGTAACACACGAATCCTCCGGGTGGAGATCATCCGTCTGCGG
CGAAGATAATTCACCCGGCTCCAAGATCTGTGTAGACATTGGATCCACAC
CGAATGATACGGTCGATGCCTGCACGTCGTCCGCTGCCTCAGTACTGCTT
GGGCTACTCACAAACGGTGTCATCAGCGCACTTGCTATTGGAGAAGCTGA
CATGAAACTCGGCAAGACAGTGATCCCAAGAGATGGGGAAGTGGATGACG
TGAAAGAACCGGCCAACACTGACAGCGATGGTGTAGCCGAGTCAGGATTA
CCGGCAGGAGCAGAGCTGGAAGCAGCTGCAGATGAAGTGACGCCAGATGC
TATGATAGTCGCAGTCGCTGCGATAGGGGTGGACGACTCGGTACCACGCG
GTGTGACTGATGGGCTGGCCTCCGGAAAAGATGCGTCGGACATTGTTGGC
AGCGGTGAAAAAGAAATCCCCGGGATTGGCATCTCCGACGAAACAGGAGT
ACCATACATGGGTGTTGGGGTCACCGATATGATTTCCGCATCTTTAGAAG
GAGCCACCACATCTGTCTTACTTCCCGATGGAGATAATGTCGGAGTGGAA
GAAGGTAAGGCAACCATTGTGGCAGATGCTCCAGGGACTGGGGTCACTCT
GAAACTTGCAGGACTATGA
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protein sequence of Ggra8295.t1

>Ggra8295.t1 ID=Ggra8295.t1|Name=Ggra8295.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=373bp
MTLAATEGVGSPEKTNVGVGNTSNGLTVTITETSGDTGNMTSGVTVGKNR
SKADTGVASALEAVGEALREAVTTPRLPFAAILGSTSAVAPTSIVGNNGS
IALPAGVVEMIPELVVLGDGEGRGVTLWLASGKVTSDVADALFAGVMSDS
SEAVTHESSGWRSSVCGEDNSPGSKICVDIGSTPNDTVDACTSSAASVLL
GLLTNGVISALAIGEADMKLGKTVIPRDGEVDDVKEPANTDSDGVAESGL
PAGAELEAAADEVTPDAMIVAVAAIGVDDSVPRGVTDGLASGKDASDIVG
SGEKEIPGIGISDETGVPYMGVGVTDMISASLEGATTSVLLPDGDNVGVE
EGKATIVADAPGTGVTLKLAGL*
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mRNA from alignment at tig00000958_pilon:12970..14088-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8295.t1 ID=Ggra8295.t1|Name=Ggra8295.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1119bp|location=Sequence derived from alignment at tig00000958_pilon:12970..14088- (Gracilaria gracilis GNS1m male)
ATGACGCTCGCAGCCACCGAAGGAGTGGGCTCTCCCGAGAAAACAAATGT
TGGCGTGGGCAACACATCCAACGGGCTCACAGTCACCATTACCGAGACTT
CAGGCGACACAGGAAACATGACCTCCGGCGTTACAGTCGGCAAGAACAGA
AGCAAAGCAGACACTGGGGTCGCTTCCGCACTTGAAGCAGTCGGAGAAGC
GCTGAGAGAAGCGGTGACTACCCCACGCCTGCCATTTGCTGCCATACTTG
GGAGCACATCTGCAGTGGCACCGACTTCCATTGTCGGCAATAATGGCTCC
ATCGCACTCCCCGCCGGGGTCGTCGAGATGATACCAGAACTTGTTGTACT
CGGAGACGGGGAGGGGCGTGGAGTAACGCTTTGGCTCGCCTCGGGAAAGG
TAACCTCGGATGTGGCAGATGCACTCTTTGCCGGTGTGATGTCCGACTCA
AGCGAAGCCGTAACACACGAATCCTCCGGGTGGAGATCATCCGTCTGCGG
CGAAGATAATTCACCCGGCTCCAAGATCTGTGTAGACATTGGATCCACAC
CGAATGATACGGTCGATGCCTGCACGTCGTCCGCTGCCTCAGTACTGCTT
GGGCTACTCACAAACGGTGTCATCAGCGCACTTGCTATTGGAGAAGCTGA
CATGAAACTCGGCAAGACAGTGATCCCAAGAGATGGGGAAGTGGATGACG
TGAAAGAACCGGCCAACACTGACAGCGATGGTGTAGCCGAGTCAGGATTA
CCGGCAGGAGCAGAGCTGGAAGCAGCTGCAGATGAAGTGACGCCAGATGC
TATGATAGTCGCAGTCGCTGCGATAGGGGTGGACGACTCGGTACCACGCG
GTGTGACTGATGGGCTGGCCTCCGGAAAAGATGCGTCGGACATTGTTGGC
AGCGGTGAAAAAGAAATCCCCGGGATTGGCATCTCCGACGAAACAGGAGT
ACCATACATGGGTGTTGGGGTCACCGATATGATTTCCGCATCTTTAGAAG
GAGCCACCACATCTGTCTTACTTCCCGATGGAGATAATGTCGGAGTGGAA
GAAGGTAAGGCAACCATTGTGGCAGATGCTCCAGGGACTGGGGTCACTCT
GAAACTTGCAGGACTATGA
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Coding sequence (CDS) from alignment at tig00000958_pilon:12970..14088-

>Ggra8295.t1 ID=Ggra8295.t1|Name=Ggra8295.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1119bp|location=Sequence derived from alignment at tig00000958_pilon:12970..14088- (Gracilaria gracilis GNS1m male)
ATGACGCTCGCAGCCACCGAAGGAGTGGGCTCTCCCGAGAAAACAAATGT
TGGCGTGGGCAACACATCCAACGGGCTCACAGTCACCATTACCGAGACTT
CAGGCGACACAGGAAACATGACCTCCGGCGTTACAGTCGGCAAGAACAGA
AGCAAAGCAGACACTGGGGTCGCTTCCGCACTTGAAGCAGTCGGAGAAGC
GCTGAGAGAAGCGGTGACTACCCCACGCCTGCCATTTGCTGCCATACTTG
GGAGCACATCTGCAGTGGCACCGACTTCCATTGTCGGCAATAATGGCTCC
ATCGCACTCCCCGCCGGGGTCGTCGAGATGATACCAGAACTTGTTGTACT
CGGAGACGGGGAGGGGCGTGGAGTAACGCTTTGGCTCGCCTCGGGAAAGG
TAACCTCGGATGTGGCAGATGCACTCTTTGCCGGTGTGATGTCCGACTCA
AGCGAAGCCGTAACACACGAATCCTCCGGGTGGAGATCATCCGTCTGCGG
CGAAGATAATTCACCCGGCTCCAAGATCTGTGTAGACATTGGATCCACAC
CGAATGATACGGTCGATGCCTGCACGTCGTCCGCTGCCTCAGTACTGCTT
GGGCTACTCACAAACGGTGTCATCAGCGCACTTGCTATTGGAGAAGCTGA
CATGAAACTCGGCAAGACAGTGATCCCAAGAGATGGGGAAGTGGATGACG
TGAAAGAACCGGCCAACACTGACAGCGATGGTGTAGCCGAGTCAGGATTA
CCGGCAGGAGCAGAGCTGGAAGCAGCTGCAGATGAAGTGACGCCAGATGC
TATGATAGTCGCAGTCGCTGCGATAGGGGTGGACGACTCGGTACCACGCG
GTGTGACTGATGGGCTGGCCTCCGGAAAAGATGCGTCGGACATTGTTGGC
AGCGGTGAAAAAGAAATCCCCGGGATTGGCATCTCCGACGAAACAGGAGT
ACCATACATGGGTGTTGGGGTCACCGATATGATTTCCGCATCTTTAGAAG
GAGCCACCACATCTGTCTTACTTCCCGATGGAGATAATGTCGGAGTGGAA
GAAGGTAAGGCAACCATTGTGGCAGATGCTCCAGGGACTGGGGTCACTCT
GAAACTTGCAGGACTATGA
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