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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 1121946.AUAX01000025_gene6380 |
| Max annot lvl | 201174|Actinobacteria |
| Evalue | 1.94e-28 |
| EggNOG OGs | COG1917@1|root,COG1917@2|Bacteria,2IHMX@201174|Actinobacteria,4DEX7@85008|Micromonosporales |
| Description | Cupin 2, conserved barrel domain protein |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra8191.t1.start1 | Ggra8191.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000872_pilon 75603..75605 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra8191.t1 ID=Ggra8191.t1|Name=Ggra8191.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=806bp MLDISHSDPPAMFSISPDGSELFPHLWRHFLRHQHIRDWLMRHPPYRVSQ VTPTNVTQGVAFCCNFSTPDLWSDMATSFEMGEMFIPDHQFRHFMCGSVV AASPFHKHLICALGSDAPRNSSTMHSYKTHVRRMVVDMRSSHVINLLEFS WMEDGMLIVMGKVLVPPTPGSRRTTAGCSGAFALFNNVTPGGVLPAAPMS FVSFVEAPLCPSCSAQGSLGCYCPTTITASDRYSSAAWPQVVTDDIFDPA STTMQNLRLRLSSIRRFSHVKVTAHLVTPELQQGDNGLTTHSYKLGPSRF IIKAVDFRPSSQFESDTLRQVADKWRLLRAGSLRVVSFLSGSQGERLLLE DNHKLQSRPSLIMSLKSTDLEQCCSTTTIPSSTVFDELLADALNNYSSSS SDDNNQSNTCNLCGRSNDDLPDGMDLSICTCMLKTDRQSATSSVSYDTSD IIEDKQHTKLTSSKRPTCHLCGKLFSQQGSLNRHLKNIHEEKKIPCQYCN MSFGQMFDLRRHQKRKHPDRRVANTKFLLEYDGAVYVLQPYNLAQEGMKA RYSASSTSAKPIMMSSSKAFHCPSRPARAEAYAGLLILLLGVTVLAFARC PSQVTSFATRAYNSPPRTGRGALPDSVSYGSAPYDGKSYQGWWVGHFVQQ DSLRHTKAVETKWATHYAGRRHDGFATNRIATSMAVLISGKHRVEFESSY VVLENPGDYVIWGPGVAHSWTALQHSTMLCIRWPSLLGDQRGQTAVINSS IDDVEHQYMEHSGMTTSGHGLQQAHRPVHSLSFSGKGDAGIAVSAAEATG DFAAK* back to topspliced messenger RNA >Ggra8191.t1 ID=Ggra8191.t1|Name=Ggra8191.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2418bp|location=Sequence derived from alignment at tig00000872_pilon:72823..75605- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCTCGACATCTCTCACTCCGACCCGCCCGCCATGTTCTCCATCTCCCC GGATGGCTCCGAGCTCTTTCCCCATCTGTGGCGTCACTTCCTGCGCCACC AGCACATCCGCGACTGGCTCATGCGCCACCCGCCCTACCGCGTCTCGCAA GTCACCCCCACCAACGTAACGCAGGGCGTCGCCTTCTGCTGCAACTTCTC CACCCCCGACCTCTGGTCCGACATGGCCACCTCCTTCGAAATGGGCGAGA TGTTCATTCCTGACCACCAGTTCCGTCACTTCATGTGCGGCTCCGTTGTC GCAGCCAGCCCTTTCCACAAGCACCTTATCTGCGCCCTCGGCTCCGACGC GCCTCGCAACTCTTCCACCATGCATTCCTACAAGACGCACGTGCGTAGAA TGGTCGTCGACATGCGCTCCTCGCACGTCATTAACCTCTTGGAGTTCTCG TGGATGGAGGACGGCATGCTCATTGTCATGGGCAAGGTGCTAGTGCCTCC CACCCCCGGCTCTCGTCGTACCACTGCGGGATGCTCCGGTGCGTTTGCGC TTTTCAACAACGTTACCCCCGGCGGCGTGCTACCGGCCGCTCCCATGTCC TTCGTTAGTTTTGTCGAGGCTCCCTTGTGCCCTTCCTGTTCCGCACAAGG ATCCCTTGGCTGCTATTGTCCGACTACAATCACTGCGTCGGACCGTTACT CCTCCGCTGCGTGGCCTCAGGTCGTGACCGACGATATCTTTGACCCGGCC TCCACTACCATGCAAAACCTCCGCCTCAGATTGTCTTCCATTCGCCGCTT TTCCCACGTCAAAGTCACAGCGCATCTCGTCACGCCTGAGCTACAACAAG GGGATAACGGCTTGACCACTCACTCTTATAAGCTCGGACCCAGTCGCTTC ATTATCAAGGCCGTCGACTTCCGCCCTAGTTCACAGTTTGAGTCCGATAC CTTGCGTCAGGTCGCTGATAAATGGCGCTTGCTTCGTGCTGGTTCTCTCC GCGTAGTCTCCTTTCTATCCGGATCCCAAGGCGAACGGCTTCTCCTGGAG GACAACCACAAATTGCAGTCGAGACCGAGTTTAATAATGTCCTTGAAATC CACCGATTTGGAGCAGTGTTGCTCGACCACCACTATTCCGTCTTCCACCG TCTTCGACGAGTTGCTGGCGGACGCCTTAAATAACTATTCCAGCTCATCG TCGGATGACAACAATCAGAGCAATACTTGTAACTTGTGTGGCAGAAGCAA TGATGATCTGCCAGATGGCATGGATTTGTCTATATGCACCTGCATGCTTA AGACGGACAGGCAGAGCGCCACGTCAAGTGTATCTTACGACACATCCGAC ATTATAGAGGACAAGCAGCACACAAAACTCACGTCTTCCAAGCGCCCAAC GTGCCATTTGTGTGGAAAGCTCTTCTCCCAACAGGGCAGTTTGAACCGTC ATTTGAAGAACATTCACGAAGAGAAGAAGATTCCATGCCAATATTGTAAC ATGTCTTTCGGACAGATGTTTGATTTACGGAGGCACCAAAAACGAAAGCA CCCCGACAGACGTGTTGCGAACACGAAATTTCTCTTGGAGTATGACGGTG CGGTGTACGTTCTTCAGCCTTACAACCTCGCCCAAGAAGGAATGAAGGCC CGCTATTCGGCTTCGTCAACAAGTGCAAAGCCGATCATGATGTCAAGCTC GAAAGCTTTCCATTGCCCGTCCCGCCCAGCTCGGGCTGAAGCATACGCAG GGTTGCTCATTTTGCTCTTGGGAGTGACAGTTCTGGCATTTGCCCGATGC CCCAGTCAAGTTACGTCGTTTGCAACACGCGCCTATAACTCTCCACCAAG AACTGGAAGAGGAGCTCTGCCAGATTCTGTATCATACGGAAGTGCGCCGT ACGATGGTAAATCATATCAGGGATGGTGGGTCGGACACTTCGTACAGCAA GATTCACTGAGACACACTAAGGCTGTTGAAACTAAATGGGCTACACACTA TGCTGGTCGACGACATGACGGGTTTGCGACGAACAGAATTGCAACATCAA TGGCTGTTCTAATCTCTGGAAAACATAGGGTGGAGTTTGAGAGCTCATAT GTGGTGCTAGAGAATCCAGGCGACTACGTGATCTGGGGCCCGGGTGTTGC GCACTCATGGACAGCGCTGCAGCATTCAACTATGCTTTGCATTCGATGGC CATCTCTGCTGGGGGATCAAAGGGGACAAACGGCAGTTATAAACTCGTCA ATAGATGACGTAGAGCATCAGTATATGGAGCACTCTGGGATGACAACTTC TGGTCATGGCTTGCAGCAGGCGCATCGTCCTGTCCATTCGTTGTCCTTCT CCGGGAAAGGAGATGCAGGCATAGCTGTGAGTGCTGCAGAGGCCACCGGC GACTTTGCCGCGAAATGA back to topprotein sequence of Ggra8191.t1 >Ggra8191.t1 ID=Ggra8191.t1|Name=Ggra8191.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=806bp
MLDISHSDPPAMFSISPDGSELFPHLWRHFLRHQHIRDWLMRHPPYRVSQ VTPTNVTQGVAFCCNFSTPDLWSDMATSFEMGEMFIPDHQFRHFMCGSVV AASPFHKHLICALGSDAPRNSSTMHSYKTHVRRMVVDMRSSHVINLLEFS WMEDGMLIVMGKVLVPPTPGSRRTTAGCSGAFALFNNVTPGGVLPAAPMS FVSFVEAPLCPSCSAQGSLGCYCPTTITASDRYSSAAWPQVVTDDIFDPA STTMQNLRLRLSSIRRFSHVKVTAHLVTPELQQGDNGLTTHSYKLGPSRF IIKAVDFRPSSQFESDTLRQVADKWRLLRAGSLRVVSFLSGSQGERLLLE DNHKLQSRPSLIMSLKSTDLEQCCSTTTIPSSTVFDELLADALNNYSSSS SDDNNQSNTCNLCGRSNDDLPDGMDLSICTCMLKTDRQSATSSVSYDTSD IIEDKQHTKLTSSKRPTCHLCGKLFSQQGSLNRHLKNIHEEKKIPCQYCN MSFGQMFDLRRHQKRKHPDRRVANTKFLLEYDGAVYVLQPYNLAQEGMKA RYSASSTSAKPIMMSSSKAFHCPSRPARAEAYAGLLILLLGVTVLAFARC PSQVTSFATRAYNSPPRTGRGALPDSVSYGSAPYDGKSYQGWWVGHFVQQ DSLRHTKAVETKWATHYAGRRHDGFATNRIATSMAVLISGKHRVEFESSY VVLENPGDYVIWGPGVAHSWTALQHSTMLCIRWPSLLGDQRGQTAVINSS IDDVEHQYMEHSGMTTSGHGLQQAHRPVHSLSFSGKGDAGIAVSAAEATG DFAAK* back to topmRNA from alignment at tig00000872_pilon:72823..75605- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra8191.t1 ID=Ggra8191.t1|Name=Ggra8191.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2783bp|location=Sequence derived from alignment at tig00000872_pilon:72823..75605- (Gracilaria gracilis GNS1m male) ATGCTCGACATCTCTCACTCCGACCCGCCCGCCATGTTCTCCATCTCCCC
GGATGGCTCCGAGCTCTTTCCCCATCTGTGGCGTCACTTCCTGCGCCACC
AGCACATCCGCGACTGGCTCATGCGCCACCCGCCCTACCGCGTCTCGCAA
GTCACCCCCACCAACGTAACGCAGGGCGTCGCCTTCTGCTGCAACTTCTC
CACCCCCGACCTCTGGTCCGACATGGCCACCTCCTTCGAAATGGGCGAGA
TGTTCATTCCTGACCACCAGTTCCGTCACTTCATGTGCGGCTCCGTTGTC
GCAGCCAGCCCTTTCCACAAGCACCTTATCTGCGCCCTCGGCTCCGACGC
GCCTCGCAACTCTTCCACCATGCATTCCTACAAGACGCACGTGCGTAGAA
TGGTCGTCGACATGCGCTCCTCGCACGTCATTAACCTCTTGGAGTTCTCG
TGGATGGAGGACGGCATGCTCATTGTCATGGGCAAGGTGCTAGTGCCTCC
CACCCCCGGCTCTCGTCGTACCACTGCGGGATGCTCCGGTGCGTTTGCGC
TTTTCAACAACGTTACCCCCGGCGGCGTGCTACCGGCCGCTCCCATGTCC
TTCGTTAGTTTTGTCGAGGCTCCCTTGTGCCCTTCCTGTTCCGCACAAGG
ATCCCTTGGCTGCTATTGTCCGACTACAATCACTGCGTCGGACCGTTACT
CCTCCGCTGCGTGGCCTCAGGTCGTGACCGACGATATCTTTGACCCGGCC
TCCACTACCATGCAAAACCTCCGCCTCAGATTGTCTTCCATTCGCCGCTT
TTCCCACGTCAAAGTCACAGCGCATCTCGTCACGCCTGAGCTACAACAAG
GGGATAACGGCTTGACCACTCACTCTTATAAGCTCGGACCCAGTCGCTTC
ATTATCAAGGCCGTCGACTTCCGCCCTAGTTCACAGTTTGAGTCCGATAC
CTTGCGTCAGGTCGCTGATAAATGGCGCTTGCTTCGTGCTGGTTCTCTCC
GCGTAGTCTCCTTTCTATCCGGATCCCAAGGCGAACGGCTTCTCCTGGAG
GACAACCACAAATTGCAGTCGAGACCGAGTTTAATAATGTCCTTGAAATC
CACCGATTTGGAGCAGTGTTGCTCGACCACCACTATTCCGTCTTCCACCG
TCTTCGACGAGTTGCTGGCGGACGCCTTAAATAACTATTCCAGCTCATCG
TCGGATGACAACAATCAGAGCAATACTTGTAACTTGTGTGGCAGAAGCAA
TGATGATCTGCCAGATGGCATGGATTTGTCTATATGCACCTGCATGCTTA
AGACGGACAGGCAGAGCGCCACGTCAAGTGTATCTTACGACACATCCGAC
ATTATAGAGGACAAGCAGCACACAAAACTCACGTCTTCCAAGCGCCCAAC
GTGCCATTTGTGTGGAAAGCTCTTCTCCCAACAGGGCAGTTTGAACCGTC
ATTTGAAGAACATTCACGAAGAGAAGAAGATTCCATGCCAATATTGTAAC
ATGTCTTTCGGACAGATGTTTGATTTACGGGTAAGTTGGTTCGCTGCGGA
TACGTATTGCTTAAAGACTACCTTTGTCCAGGTCGTTGACGACAGCGCTG
ATACTAACTACCGGATTATGTTGTAATTTGTGTTTTGAACGCAGAGGCAC
CAAAAACGAAAGCACCCCGACAGACGTGTTGCGAACACGAAATGTGAGCG
GATAGAGACAAAAGCTTACCGGATTCCTATTGAGCGCTTGAAGAACTGAA
TGTTACACTGATCTCTGGATGCTGGGGCTAGAAACCATGCATGTGCCTCC
AAGAAAAGTCTGCCAAAGCATCCGTGACTCTTGTGACCTAACCACCGACA
TTGAGTTTTCTAATTTACTGGTTTGTACTGTCACCTGCTTTAATTATTGT
CACACACTCAAGTCTCTCATTGCTTTTCACAACTTTGTTCTTAGTTCTCT
TGGAGTATGACGGTGCGGTGTACGTTCTTCAGCCTTACAACCTCGCCCAA
GAAGGAATGAAGGCCCGCTATTCGGCTTCGTCAACAAGTGCAAAGCCGAT
CATGATGTCAAGCTCGAAAGCTTTCCATTGCCCGTCCCGCCCAGCTCGGG
CTGAAGCATACGCAGGGTTGCTCATTTTGCTCTTGGGAGTGACAGTTCTG
GCATTTGCCCGATGCCCCAGTCAAGTTACGTCGTTTGCAACACGCGCCTA
TAACTCTCCACCAAGAACTGGAAGAGGAGCTCTGCCAGATTCTGTATCAT
ACGGAAGTGCGCCGTACGATGGTAAATCATATCAGGGATGGTGGGTCGGA
CACTTCGTACAGCAAGATTCACTGAGACACACTAAGGCTGTTGAAACTAA
ATGGGCTACACACTATGCTGGTCGACGACATGACGGGTTTGCGACGAACA
GAATTGCAACATCAATGGCTGTTCTAATCTCTGGAAAACATAGGGTGGAG
TTTGAGAGCTCATATGTGGTGCTAGAGAATCCAGGCGACTACGTGATCTG
GGGCCCGGGTGTTGCGCACTCATGGACAGCGCTGCAGCATTCAACTATGC
TTTGCATTCGATGGCCATCTCTGCTGGGGGATCAAAGGGGACAAACGGCA
GTTATAAACTCGTCAATAGATGACGTAGAGCATCAGTATATGGAGCACTC
TGGGATGACAACTTCTGGTCATGGCTTGCAGCAGGCGCATCGTCCTGTCC
ATTCGTTGTCCTTCTCCGGGAAAGGAGATGCAGGCATAGCTGTGAGTGCT
GCAGAGGCCACCGGCGACTTTGCCGCGAAATGA back to topCoding sequence (CDS) from alignment at tig00000872_pilon:72823..75605- >Ggra8191.t1 ID=Ggra8191.t1|Name=Ggra8191.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2418bp|location=Sequence derived from alignment at tig00000872_pilon:72823..75605- (Gracilaria gracilis GNS1m male) ATGCTCGACATCTCTCACTCCGACCCGCCCGCCATGTTCTCCATCTCCCC GGATGGCTCCGAGCTCTTTCCCCATCTGTGGCGTCACTTCCTGCGCCACC AGCACATCCGCGACTGGCTCATGCGCCACCCGCCCTACCGCGTCTCGCAA GTCACCCCCACCAACGTAACGCAGGGCGTCGCCTTCTGCTGCAACTTCTC CACCCCCGACCTCTGGTCCGACATGGCCACCTCCTTCGAAATGGGCGAGA TGTTCATTCCTGACCACCAGTTCCGTCACTTCATGTGCGGCTCCGTTGTC GCAGCCAGCCCTTTCCACAAGCACCTTATCTGCGCCCTCGGCTCCGACGC GCCTCGCAACTCTTCCACCATGCATTCCTACAAGACGCACGTGCGTAGAA TGGTCGTCGACATGCGCTCCTCGCACGTCATTAACCTCTTGGAGTTCTCG TGGATGGAGGACGGCATGCTCATTGTCATGGGCAAGGTGCTAGTGCCTCC CACCCCCGGCTCTCGTCGTACCACTGCGGGATGCTCCGGTGCGTTTGCGC TTTTCAACAACGTTACCCCCGGCGGCGTGCTACCGGCCGCTCCCATGTCC TTCGTTAGTTTTGTCGAGGCTCCCTTGTGCCCTTCCTGTTCCGCACAAGG ATCCCTTGGCTGCTATTGTCCGACTACAATCACTGCGTCGGACCGTTACT CCTCCGCTGCGTGGCCTCAGGTCGTGACCGACGATATCTTTGACCCGGCC TCCACTACCATGCAAAACCTCCGCCTCAGATTGTCTTCCATTCGCCGCTT TTCCCACGTCAAAGTCACAGCGCATCTCGTCACGCCTGAGCTACAACAAG GGGATAACGGCTTGACCACTCACTCTTATAAGCTCGGACCCAGTCGCTTC ATTATCAAGGCCGTCGACTTCCGCCCTAGTTCACAGTTTGAGTCCGATAC CTTGCGTCAGGTCGCTGATAAATGGCGCTTGCTTCGTGCTGGTTCTCTCC GCGTAGTCTCCTTTCTATCCGGATCCCAAGGCGAACGGCTTCTCCTGGAG GACAACCACAAATTGCAGTCGAGACCGAGTTTAATAATGTCCTTGAAATC CACCGATTTGGAGCAGTGTTGCTCGACCACCACTATTCCGTCTTCCACCG TCTTCGACGAGTTGCTGGCGGACGCCTTAAATAACTATTCCAGCTCATCG TCGGATGACAACAATCAGAGCAATACTTGTAACTTGTGTGGCAGAAGCAA TGATGATCTGCCAGATGGCATGGATTTGTCTATATGCACCTGCATGCTTA AGACGGACAGGCAGAGCGCCACGTCAAGTGTATCTTACGACACATCCGAC ATTATAGAGGACAAGCAGCACACAAAACTCACGTCTTCCAAGCGCCCAAC GTGCCATTTGTGTGGAAAGCTCTTCTCCCAACAGGGCAGTTTGAACCGTC ATTTGAAGAACATTCACGAAGAGAAGAAGATTCCATGCCAATATTGTAAC ATGTCTTTCGGACAGATGTTTGATTTACGGAGGCACCAAAAACGAAAGCA CCCCGACAGACGTGTTGCGAACACGAAATTTCTCTTGGAGTATGACGGTG CGGTGTACGTTCTTCAGCCTTACAACCTCGCCCAAGAAGGAATGAAGGCC CGCTATTCGGCTTCGTCAACAAGTGCAAAGCCGATCATGATGTCAAGCTC GAAAGCTTTCCATTGCCCGTCCCGCCCAGCTCGGGCTGAAGCATACGCAG GGTTGCTCATTTTGCTCTTGGGAGTGACAGTTCTGGCATTTGCCCGATGC CCCAGTCAAGTTACGTCGTTTGCAACACGCGCCTATAACTCTCCACCAAG AACTGGAAGAGGAGCTCTGCCAGATTCTGTATCATACGGAAGTGCGCCGT ACGATGGTAAATCATATCAGGGATGGTGGGTCGGACACTTCGTACAGCAA GATTCACTGAGACACACTAAGGCTGTTGAAACTAAATGGGCTACACACTA TGCTGGTCGACGACATGACGGGTTTGCGACGAACAGAATTGCAACATCAA TGGCTGTTCTAATCTCTGGAAAACATAGGGTGGAGTTTGAGAGCTCATAT GTGGTGCTAGAGAATCCAGGCGACTACGTGATCTGGGGCCCGGGTGTTGC GCACTCATGGACAGCGCTGCAGCATTCAACTATGCTTTGCATTCGATGGC CATCTCTGCTGGGGGATCAAAGGGGACAAACGGCAGTTATAAACTCGTCA ATAGATGACGTAGAGCATCAGTATATGGAGCACTCTGGGATGACAACTTC TGGTCATGGCTTGCAGCAGGCGCATCGTCCTGTCCATTCGTTGTCCTTCT CCGGGAAAGGAGATGCAGGCATAGCTGTGAGTGCTGCAGAGGCCACCGGC GACTTTGCCGCGAAATGA back to top
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