Ggra8128.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8128.t1
Unique NameGgra8128.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length183
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000118_piloncontigtig00000118_pilon:194466..195014 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8128Ggra8128Gracilaria gracilis GNS1m malegenetig00000118_pilon 194466..195014 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8128.t1.start1Ggra8128.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000118_pilon 194466..194468 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8128.t1.CDS1Ggra8128.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000118_pilon 194466..195014 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8128.t1.exon1Ggra8128.t1.exon1Gracilaria gracilis GNS1m maleexontig00000118_pilon 194466..195014 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8128.t1.stop1Ggra8128.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000118_pilon 195012..195014 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8128.t1Ggra8128.t1Gracilaria gracilis GNS1m malepolypeptidetig00000118_pilon 194466..195014 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8128.t1 ID=Ggra8128.t1|Name=Ggra8128.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=183bp
MSQTRNAGGKQKEAKPPIGFHFAEEYGRDRFRFRFQDKDKFQRRLSWDEH
AFNQLNEYRRKRGVRRLTWSAFLNGKAMEISLRQIRHKKFKLETNEEKCY
ATSFVITTADAFDIACNEMNMGLSEAISRDINMKDIYKRRYLCSCRGCRH
EDDDPPDGGTAVLVFDNAIMVTTVIGRATGIE*
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spliced messenger RNA

>Ggra8128.t1 ID=Ggra8128.t1|Name=Ggra8128.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=549bp|location=Sequence derived from alignment at tig00000118_pilon:194466..195014+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCCAAACAAGAAATGCAGGAGGAAAACAGAAGGAGGCTAAGCCTCC
TATTGGCTTTCATTTTGCGGAAGAGTATGGACGCGATCGATTCCGCTTTA
GATTCCAAGACAAAGACAAATTTCAAAGGAGATTATCATGGGACGAGCAT
GCGTTCAACCAACTTAATGAGTACAGAAGAAAGCGGGGTGTGCGCAGGTT
GACATGGTCGGCATTCCTCAATGGAAAAGCGATGGAGATATCGCTAAGGC
AGATTCGACACAAAAAGTTTAAACTTGAAACTAATGAGGAAAAGTGTTAT
GCGACTTCATTCGTCATAACAACCGCTGACGCTTTCGATATTGCATGTAA
CGAAATGAATATGGGTTTATCGGAGGCAATCTCGCGGGACATCAATATGA
AGGACATTTATAAACGCCGCTACCTCTGCTCTTGTAGAGGTTGTCGACAC
GAAGACGACGATCCACCCGACGGAGGAACAGCTGTGTTGGTTTTTGACAA
TGCAATAATGGTTACTACTGTTATAGGCAGGGCTACTGGAATTGAGTAG
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protein sequence of Ggra8128.t1

>Ggra8128.t1 ID=Ggra8128.t1|Name=Ggra8128.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=183bp
MSQTRNAGGKQKEAKPPIGFHFAEEYGRDRFRFRFQDKDKFQRRLSWDEH
AFNQLNEYRRKRGVRRLTWSAFLNGKAMEISLRQIRHKKFKLETNEEKCY
ATSFVITTADAFDIACNEMNMGLSEAISRDINMKDIYKRRYLCSCRGCRH
EDDDPPDGGTAVLVFDNAIMVTTVIGRATGIE*
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mRNA from alignment at tig00000118_pilon:194466..195014+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8128.t1 ID=Ggra8128.t1|Name=Ggra8128.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=549bp|location=Sequence derived from alignment at tig00000118_pilon:194466..195014+ (Gracilaria gracilis GNS1m male)
ATGAGCCAAACAAGAAATGCAGGAGGAAAACAGAAGGAGGCTAAGCCTCC
TATTGGCTTTCATTTTGCGGAAGAGTATGGACGCGATCGATTCCGCTTTA
GATTCCAAGACAAAGACAAATTTCAAAGGAGATTATCATGGGACGAGCAT
GCGTTCAACCAACTTAATGAGTACAGAAGAAAGCGGGGTGTGCGCAGGTT
GACATGGTCGGCATTCCTCAATGGAAAAGCGATGGAGATATCGCTAAGGC
AGATTCGACACAAAAAGTTTAAACTTGAAACTAATGAGGAAAAGTGTTAT
GCGACTTCATTCGTCATAACAACCGCTGACGCTTTCGATATTGCATGTAA
CGAAATGAATATGGGTTTATCGGAGGCAATCTCGCGGGACATCAATATGA
AGGACATTTATAAACGCCGCTACCTCTGCTCTTGTAGAGGTTGTCGACAC
GAAGACGACGATCCACCCGACGGAGGAACAGCTGTGTTGGTTTTTGACAA
TGCAATAATGGTTACTACTGTTATAGGCAGGGCTACTGGAATTGAGTAG
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Coding sequence (CDS) from alignment at tig00000118_pilon:194466..195014+

>Ggra8128.t1 ID=Ggra8128.t1|Name=Ggra8128.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=549bp|location=Sequence derived from alignment at tig00000118_pilon:194466..195014+ (Gracilaria gracilis GNS1m male)
ATGAGCCAAACAAGAAATGCAGGAGGAAAACAGAAGGAGGCTAAGCCTCC
TATTGGCTTTCATTTTGCGGAAGAGTATGGACGCGATCGATTCCGCTTTA
GATTCCAAGACAAAGACAAATTTCAAAGGAGATTATCATGGGACGAGCAT
GCGTTCAACCAACTTAATGAGTACAGAAGAAAGCGGGGTGTGCGCAGGTT
GACATGGTCGGCATTCCTCAATGGAAAAGCGATGGAGATATCGCTAAGGC
AGATTCGACACAAAAAGTTTAAACTTGAAACTAATGAGGAAAAGTGTTAT
GCGACTTCATTCGTCATAACAACCGCTGACGCTTTCGATATTGCATGTAA
CGAAATGAATATGGGTTTATCGGAGGCAATCTCGCGGGACATCAATATGA
AGGACATTTATAAACGCCGCTACCTCTGCTCTTGTAGAGGTTGTCGACAC
GAAGACGACGATCCACCCGACGGAGGAACAGCTGTGTTGGTTTTTGACAA
TGCAATAATGGTTACTACTGTTATAGGCAGGGCTACTGGAATTGAGTAG
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