Ggra8061.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8061.t1
Unique NameGgra8061.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length239
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000867_piloncontigtig00000867_pilon:144496..145212 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8061Ggra8061Gracilaria gracilis GNS1m malegenetig00000867_pilon 144496..145212 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8061.t1.start1Ggra8061.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000867_pilon 144496..144498 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8061.t1.CDS1Ggra8061.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000867_pilon 144496..145212 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8061.t1.exon1Ggra8061.t1.exon1Gracilaria gracilis GNS1m maleexontig00000867_pilon 144496..145212 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8061.t1.stop1Ggra8061.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000867_pilon 145210..145212 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8061.t1Ggra8061.t1Gracilaria gracilis GNS1m malepolypeptidetig00000867_pilon 144496..145212 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8061.t1 ID=Ggra8061.t1|Name=Ggra8061.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=239bp
MAYNQFKPALLALLFLTLTYKVCVCFPLSNDASPRGGDLENARNKVMDQS
FIATPPGKGFEKLSVKLDLLMPTSIASTKTIDNLNAAVKVRSDPVANQVS
FVLRLMGQILAALRSVTTATTSQTAMTHVNSAISKLDELMRQATALITAF
PASDQGLARRALDFWVDALTVVRETLVGFVAAATDLAGIKGAAQRVIDQL
GQGFWTRAEAALNGYVSLSRFTEAWNPWFNSIRDYMDS*
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spliced messenger RNA

>Ggra8061.t1 ID=Ggra8061.t1|Name=Ggra8061.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=717bp|location=Sequence derived from alignment at tig00000867_pilon:144496..145212+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCTACAATCAATTCAAGCCCGCCTTACTAGCACTACTCTTCCTCAC
CTTAACCTACAAAGTCTGCGTTTGCTTCCCACTTTCGAACGATGCATCAC
CCCGTGGCGGAGATTTGGAAAATGCTAGAAACAAAGTTATGGACCAGTCT
TTCATTGCAACGCCACCTGGAAAGGGTTTTGAGAAGCTTTCTGTGAAGCT
TGATCTGCTTATGCCTACATCTATAGCGAGTACTAAGACCATCGACAACT
TAAACGCTGCCGTTAAGGTCCGAAGTGACCCGGTCGCGAATCAGGTCTCG
TTTGTTCTCCGTTTGATGGGGCAGATCCTTGCAGCTCTTCGCAGTGTGAC
AACAGCCACAACGTCTCAAACTGCCATGACTCACGTCAACTCAGCAATTT
CAAAGCTGGACGAACTAATGAGGCAGGCAACTGCGTTGATTACCGCCTTT
CCAGCTTCCGATCAAGGCCTCGCAAGGAGGGCTCTTGACTTTTGGGTTGA
TGCTTTAACGGTTGTCAGAGAAACTCTGGTGGGCTTTGTCGCAGCTGCAA
CTGACCTCGCAGGTATTAAGGGTGCAGCCCAGAGAGTTATCGATCAATTA
GGGCAGGGATTCTGGACAAGGGCAGAAGCGGCCCTAAATGGATACGTCTC
GCTGAGCAGATTCACTGAGGCATGGAACCCTTGGTTCAACTCTATTCGTG
ACTATATGGATTCGTAA
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protein sequence of Ggra8061.t1

>Ggra8061.t1 ID=Ggra8061.t1|Name=Ggra8061.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=239bp
MAYNQFKPALLALLFLTLTYKVCVCFPLSNDASPRGGDLENARNKVMDQS
FIATPPGKGFEKLSVKLDLLMPTSIASTKTIDNLNAAVKVRSDPVANQVS
FVLRLMGQILAALRSVTTATTSQTAMTHVNSAISKLDELMRQATALITAF
PASDQGLARRALDFWVDALTVVRETLVGFVAAATDLAGIKGAAQRVIDQL
GQGFWTRAEAALNGYVSLSRFTEAWNPWFNSIRDYMDS*
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mRNA from alignment at tig00000867_pilon:144496..145212+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8061.t1 ID=Ggra8061.t1|Name=Ggra8061.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=717bp|location=Sequence derived from alignment at tig00000867_pilon:144496..145212+ (Gracilaria gracilis GNS1m male)
ATGGCCTACAATCAATTCAAGCCCGCCTTACTAGCACTACTCTTCCTCAC
CTTAACCTACAAAGTCTGCGTTTGCTTCCCACTTTCGAACGATGCATCAC
CCCGTGGCGGAGATTTGGAAAATGCTAGAAACAAAGTTATGGACCAGTCT
TTCATTGCAACGCCACCTGGAAAGGGTTTTGAGAAGCTTTCTGTGAAGCT
TGATCTGCTTATGCCTACATCTATAGCGAGTACTAAGACCATCGACAACT
TAAACGCTGCCGTTAAGGTCCGAAGTGACCCGGTCGCGAATCAGGTCTCG
TTTGTTCTCCGTTTGATGGGGCAGATCCTTGCAGCTCTTCGCAGTGTGAC
AACAGCCACAACGTCTCAAACTGCCATGACTCACGTCAACTCAGCAATTT
CAAAGCTGGACGAACTAATGAGGCAGGCAACTGCGTTGATTACCGCCTTT
CCAGCTTCCGATCAAGGCCTCGCAAGGAGGGCTCTTGACTTTTGGGTTGA
TGCTTTAACGGTTGTCAGAGAAACTCTGGTGGGCTTTGTCGCAGCTGCAA
CTGACCTCGCAGGTATTAAGGGTGCAGCCCAGAGAGTTATCGATCAATTA
GGGCAGGGATTCTGGACAAGGGCAGAAGCGGCCCTAAATGGATACGTCTC
GCTGAGCAGATTCACTGAGGCATGGAACCCTTGGTTCAACTCTATTCGTG
ACTATATGGATTCGTAA
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Coding sequence (CDS) from alignment at tig00000867_pilon:144496..145212+

>Ggra8061.t1 ID=Ggra8061.t1|Name=Ggra8061.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=717bp|location=Sequence derived from alignment at tig00000867_pilon:144496..145212+ (Gracilaria gracilis GNS1m male)
ATGGCCTACAATCAATTCAAGCCCGCCTTACTAGCACTACTCTTCCTCAC
CTTAACCTACAAAGTCTGCGTTTGCTTCCCACTTTCGAACGATGCATCAC
CCCGTGGCGGAGATTTGGAAAATGCTAGAAACAAAGTTATGGACCAGTCT
TTCATTGCAACGCCACCTGGAAAGGGTTTTGAGAAGCTTTCTGTGAAGCT
TGATCTGCTTATGCCTACATCTATAGCGAGTACTAAGACCATCGACAACT
TAAACGCTGCCGTTAAGGTCCGAAGTGACCCGGTCGCGAATCAGGTCTCG
TTTGTTCTCCGTTTGATGGGGCAGATCCTTGCAGCTCTTCGCAGTGTGAC
AACAGCCACAACGTCTCAAACTGCCATGACTCACGTCAACTCAGCAATTT
CAAAGCTGGACGAACTAATGAGGCAGGCAACTGCGTTGATTACCGCCTTT
CCAGCTTCCGATCAAGGCCTCGCAAGGAGGGCTCTTGACTTTTGGGTTGA
TGCTTTAACGGTTGTCAGAGAAACTCTGGTGGGCTTTGTCGCAGCTGCAA
CTGACCTCGCAGGTATTAAGGGTGCAGCCCAGAGAGTTATCGATCAATTA
GGGCAGGGATTCTGGACAAGGGCAGAAGCGGCCCTAAATGGATACGTCTC
GCTGAGCAGATTCACTGAGGCATGGAACCCTTGGTTCAACTCTATTCGTG
ACTATATGGATTCGTAA
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