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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005704408.1 |
| PFAMs | AA_kinase,ACT,ACT_7,Homoserine_dh,NAD_binding_3,Orai-1 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00002,RC00043,RC00087 |
| KEGG ko | ko:K12524 |
| KEGG Reaction | R00480,R01773,R01775 |
| KEGG Pathway | ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 |
| KEGG Module | M00016,M00017,M00018,M00526,M00527 |
| Evalue | 0.0 |
| EggNOG OGs | COG0460@1|root,2QQBK@2759|Eukaryota |
| EC | 1.1.1.3,2.7.2.4 |
| Description | homoserine dehydrogenase activity |
| COG category | E |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra7955.t1.start1 | Ggra7955.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000073_pilon 511353..511355 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra7955.t1.stop1 | Ggra7955.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000073_pilon 513858..513860 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra7955.t1 ID=Ggra7955.t1|Name=Ggra7955.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=836bp MGRVADIIASCAAASSKLLVVVSAAAGVTDAMHAVVTAAASRDPHAHYAE QLQLVADTHRRLAEQLLPDEARDAFLATLTANIKDLVDLLRATWIARSVS DRIRDLIVGHGELWSAQLLWALCRSRHRLVCSWMDSRDVLVARPSETSIN RKIVLNDPSKPLLFDWLRSNPTDVVIATGYICQDSEGVPSTLGRNGSDYS ASAFASLLSAVELNIWTDVDGVYSADPRVVNDAIVIPDMSYKEAAELAYF GAKVLHPDTMAPIIETGIPMRIRNTFNKDFPGTLVRETDMPADRASAQYE YATRDMAGVKGFTTVQDVSIVNIEGTGMIGVPGIASRAFQALFSENVSVI LIAQASSEFSICIAIPSTQRVVATKSITRAFRPELADGLISTVSSIPDCS ILAMVGEQMQQRPGVSSRLFASLTRAGVNIVAMAQGSSEHNISVVVDAKS ESRALRAAHASFYLSDQTVSLGLIGPGLVGSAFLEQIQSQLETLEKQFSV DLRVRGIATSSKMVFGEPIELNDQAWKGSLKSDKAEPLDLDSFADRIQDI ALPHAVICDCSASEEVSAYYEKWLKRGIHIITPNKKANSGPLHYYRAMRT AQRRFNSHFLYEANVGAGLPIISSIRDLLRTGDKFLEIEGIFSGTLSFIF NEFDGSVPFSAIVSKAKANGYTEPDPRDDLSGMDVARKVVIVAREIGIKV ELDQVPVESLVPKELQGSDVSVEEFMKRLPESDSGLTSMANEAKEAGELL RYVGVVDCKNRRCAVELRRYSESHPFGRLRGSDNIVSFRTMRYNAQPLVV QGPGAGADVTAAGVFGDLLRLAGYLGAPSSEDDAS* back to topspliced messenger RNA >Ggra7955.t1 ID=Ggra7955.t1|Name=Ggra7955.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2508bp|location=Sequence derived from alignment at tig00000073_pilon:511353..513860+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGGCCGCGTGGCCGACATCATCGCGTCGTGCGCCGCCGCGTCGTCCAA GCTGCTCGTCGTTGTGTCGGCCGCTGCCGGCGTCACCGACGCCATGCACG CCGTTGTCACTGCTGCCGCTTCGCGCGATCCGCACGCGCATTACGCCGAG CAGCTGCAGCTTGTTGCCGACACGCATCGCCGCCTGGCCGAGCAGCTGCT TCCCGACGAGGCGCGCGACGCCTTTTTGGCCACCCTCACCGCCAATATCA AGGACCTCGTCGACCTGCTGCGCGCCACCTGGATTGCGCGCTCCGTGTCT GACCGCATCCGCGATCTCATCGTGGGACATGGCGAGCTGTGGTCTGCTCA GTTGCTGTGGGCTCTGTGCCGCTCGCGCCACCGCCTTGTGTGCTCGTGGA TGGACTCGCGCGATGTGCTCGTCGCCCGCCCGAGCGAGACGTCTATCAAC CGAAAGATTGTCTTGAACGACCCTAGCAAACCGCTTCTGTTCGACTGGCT GCGATCCAACCCCACTGACGTCGTCATTGCTACGGGCTATATCTGCCAGG ATAGCGAGGGCGTTCCTTCTACTCTTGGTCGCAACGGCTCGGATTACTCC GCCTCGGCCTTTGCTAGTCTCTTGTCTGCCGTCGAGCTCAATATCTGGAC AGACGTTGACGGCGTATACTCTGCAGACCCGCGCGTTGTCAACGACGCCA TTGTCATCCCGGACATGAGCTACAAAGAGGCCGCTGAGCTCGCCTACTTT GGAGCAAAGGTACTGCATCCTGACACAATGGCACCTATTATTGAGACCGG TATCCCCATGCGCATTCGAAATACATTCAACAAGGATTTCCCTGGTACTC TTGTGCGGGAGACTGACATGCCGGCAGATCGTGCCTCCGCTCAGTATGAA TACGCTACCCGAGACATGGCGGGCGTTAAGGGCTTTACCACTGTCCAAGA TGTTTCCATTGTCAATATCGAGGGTACGGGAATGATCGGTGTGCCTGGTA TTGCGTCGCGTGCCTTTCAGGCTCTCTTCTCCGAAAACGTGTCTGTCATT CTTATCGCTCAGGCCAGTTCTGAGTTTTCGATATGTATTGCCATTCCCTC TACACAACGTGTGGTGGCCACAAAGTCTATTACGCGCGCTTTTAGGCCAG AACTCGCAGATGGACTCATCTCAACTGTGTCTTCAATACCCGATTGTAGT ATTCTGGCCATGGTCGGTGAGCAGATGCAGCAGCGACCGGGTGTTTCATC TCGCTTGTTTGCCTCGCTGACGCGAGCCGGTGTTAATATTGTTGCAATGG CTCAGGGCTCGTCGGAACACAACATTTCCGTAGTGGTGGATGCGAAGAGC GAGAGTCGGGCACTCAGAGCAGCGCACGCCTCCTTCTACCTTTCTGACCA GACGGTGTCCTTGGGACTCATTGGCCCTGGACTTGTCGGCAGCGCTTTCC TCGAGCAGATTCAAAGCCAACTTGAGACGCTTGAGAAACAGTTTTCTGTG GATTTGAGAGTGAGAGGTATTGCCACATCAAGCAAAATGGTGTTTGGCGA ACCTATAGAGCTTAATGACCAGGCCTGGAAGGGTTCCCTCAAGTCTGACA AGGCCGAACCACTTGACTTGGATTCGTTCGCTGACCGTATTCAAGACATT GCATTGCCCCATGCAGTTATCTGCGACTGTTCAGCTTCAGAAGAAGTATC TGCATACTATGAGAAATGGTTAAAGAGGGGTATCCATATTATAACTCCAA ACAAGAAAGCAAACAGTGGACCACTGCATTACTACCGTGCCATGAGGACA GCCCAACGTCGCTTCAATTCTCATTTCTTATATGAAGCGAATGTGGGTGC TGGGCTCCCAATCATATCATCGATTCGCGATTTGCTACGCACTGGTGATA AGTTCTTGGAAATCGAGGGCATCTTCTCAGGAACTCTGAGTTTCATATTC AACGAGTTCGATGGTTCCGTACCGTTCTCTGCAATCGTCTCCAAAGCAAA GGCCAATGGATACACTGAACCTGATCCACGGGACGATTTGAGCGGAATGG ACGTTGCTAGAAAGGTCGTGATTGTGGCGAGAGAGATTGGTATCAAGGTC GAACTTGACCAGGTTCCTGTGGAAAGCCTTGTTCCCAAGGAATTACAGGG AAGCGATGTGTCTGTGGAAGAATTTATGAAACGCCTTCCCGAATCTGACA GCGGTCTCACGTCTATGGCCAACGAGGCAAAAGAAGCCGGAGAACTGTTG CGGTATGTGGGTGTTGTCGATTGCAAGAACAGGAGGTGTGCTGTCGAACT TCGTCGGTATTCTGAGAGTCATCCCTTCGGAAGACTGCGAGGGTCGGACA ACATCGTGTCGTTCCGGACCATGCGTTACAATGCCCAACCTCTTGTTGTC CAGGGCCCTGGAGCCGGTGCAGATGTCACAGCTGCTGGTGTCTTCGGGGA TCTCCTGCGCCTCGCTGGGTATCTCGGGGCCCCTTCCAGCGAAGATGATG CAAGCTAA back to topprotein sequence of Ggra7955.t1 >Ggra7955.t1 ID=Ggra7955.t1|Name=Ggra7955.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=836bp
MGRVADIIASCAAASSKLLVVVSAAAGVTDAMHAVVTAAASRDPHAHYAE QLQLVADTHRRLAEQLLPDEARDAFLATLTANIKDLVDLLRATWIARSVS DRIRDLIVGHGELWSAQLLWALCRSRHRLVCSWMDSRDVLVARPSETSIN RKIVLNDPSKPLLFDWLRSNPTDVVIATGYICQDSEGVPSTLGRNGSDYS ASAFASLLSAVELNIWTDVDGVYSADPRVVNDAIVIPDMSYKEAAELAYF GAKVLHPDTMAPIIETGIPMRIRNTFNKDFPGTLVRETDMPADRASAQYE YATRDMAGVKGFTTVQDVSIVNIEGTGMIGVPGIASRAFQALFSENVSVI LIAQASSEFSICIAIPSTQRVVATKSITRAFRPELADGLISTVSSIPDCS ILAMVGEQMQQRPGVSSRLFASLTRAGVNIVAMAQGSSEHNISVVVDAKS ESRALRAAHASFYLSDQTVSLGLIGPGLVGSAFLEQIQSQLETLEKQFSV DLRVRGIATSSKMVFGEPIELNDQAWKGSLKSDKAEPLDLDSFADRIQDI ALPHAVICDCSASEEVSAYYEKWLKRGIHIITPNKKANSGPLHYYRAMRT AQRRFNSHFLYEANVGAGLPIISSIRDLLRTGDKFLEIEGIFSGTLSFIF NEFDGSVPFSAIVSKAKANGYTEPDPRDDLSGMDVARKVVIVAREIGIKV ELDQVPVESLVPKELQGSDVSVEEFMKRLPESDSGLTSMANEAKEAGELL RYVGVVDCKNRRCAVELRRYSESHPFGRLRGSDNIVSFRTMRYNAQPLVV QGPGAGADVTAAGVFGDLLRLAGYLGAPSSEDDAS* back to topmRNA from alignment at tig00000073_pilon:511353..513860+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra7955.t1 ID=Ggra7955.t1|Name=Ggra7955.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2508bp|location=Sequence derived from alignment at tig00000073_pilon:511353..513860+ (Gracilaria gracilis GNS1m male) ATGGGCCGCGTGGCCGACATCATCGCGTCGTGCGCCGCCGCGTCGTCCAA
GCTGCTCGTCGTTGTGTCGGCCGCTGCCGGCGTCACCGACGCCATGCACG
CCGTTGTCACTGCTGCCGCTTCGCGCGATCCGCACGCGCATTACGCCGAG
CAGCTGCAGCTTGTTGCCGACACGCATCGCCGCCTGGCCGAGCAGCTGCT
TCCCGACGAGGCGCGCGACGCCTTTTTGGCCACCCTCACCGCCAATATCA
AGGACCTCGTCGACCTGCTGCGCGCCACCTGGATTGCGCGCTCCGTGTCT
GACCGCATCCGCGATCTCATCGTGGGACATGGCGAGCTGTGGTCTGCTCA
GTTGCTGTGGGCTCTGTGCCGCTCGCGCCACCGCCTTGTGTGCTCGTGGA
TGGACTCGCGCGATGTGCTCGTCGCCCGCCCGAGCGAGACGTCTATCAAC
CGAAAGATTGTCTTGAACGACCCTAGCAAACCGCTTCTGTTCGACTGGCT
GCGATCCAACCCCACTGACGTCGTCATTGCTACGGGCTATATCTGCCAGG
ATAGCGAGGGCGTTCCTTCTACTCTTGGTCGCAACGGCTCGGATTACTCC
GCCTCGGCCTTTGCTAGTCTCTTGTCTGCCGTCGAGCTCAATATCTGGAC
AGACGTTGACGGCGTATACTCTGCAGACCCGCGCGTTGTCAACGACGCCA
TTGTCATCCCGGACATGAGCTACAAAGAGGCCGCTGAGCTCGCCTACTTT
GGAGCAAAGGTACTGCATCCTGACACAATGGCACCTATTATTGAGACCGG
TATCCCCATGCGCATTCGAAATACATTCAACAAGGATTTCCCTGGTACTC
TTGTGCGGGAGACTGACATGCCGGCAGATCGTGCCTCCGCTCAGTATGAA
TACGCTACCCGAGACATGGCGGGCGTTAAGGGCTTTACCACTGTCCAAGA
TGTTTCCATTGTCAATATCGAGGGTACGGGAATGATCGGTGTGCCTGGTA
TTGCGTCGCGTGCCTTTCAGGCTCTCTTCTCCGAAAACGTGTCTGTCATT
CTTATCGCTCAGGCCAGTTCTGAGTTTTCGATATGTATTGCCATTCCCTC
TACACAACGTGTGGTGGCCACAAAGTCTATTACGCGCGCTTTTAGGCCAG
AACTCGCAGATGGACTCATCTCAACTGTGTCTTCAATACCCGATTGTAGT
ATTCTGGCCATGGTCGGTGAGCAGATGCAGCAGCGACCGGGTGTTTCATC
TCGCTTGTTTGCCTCGCTGACGCGAGCCGGTGTTAATATTGTTGCAATGG
CTCAGGGCTCGTCGGAACACAACATTTCCGTAGTGGTGGATGCGAAGAGC
GAGAGTCGGGCACTCAGAGCAGCGCACGCCTCCTTCTACCTTTCTGACCA
GACGGTGTCCTTGGGACTCATTGGCCCTGGACTTGTCGGCAGCGCTTTCC
TCGAGCAGATTCAAAGCCAACTTGAGACGCTTGAGAAACAGTTTTCTGTG
GATTTGAGAGTGAGAGGTATTGCCACATCAAGCAAAATGGTGTTTGGCGA
ACCTATAGAGCTTAATGACCAGGCCTGGAAGGGTTCCCTCAAGTCTGACA
AGGCCGAACCACTTGACTTGGATTCGTTCGCTGACCGTATTCAAGACATT
GCATTGCCCCATGCAGTTATCTGCGACTGTTCAGCTTCAGAAGAAGTATC
TGCATACTATGAGAAATGGTTAAAGAGGGGTATCCATATTATAACTCCAA
ACAAGAAAGCAAACAGTGGACCACTGCATTACTACCGTGCCATGAGGACA
GCCCAACGTCGCTTCAATTCTCATTTCTTATATGAAGCGAATGTGGGTGC
TGGGCTCCCAATCATATCATCGATTCGCGATTTGCTACGCACTGGTGATA
AGTTCTTGGAAATCGAGGGCATCTTCTCAGGAACTCTGAGTTTCATATTC
AACGAGTTCGATGGTTCCGTACCGTTCTCTGCAATCGTCTCCAAAGCAAA
GGCCAATGGATACACTGAACCTGATCCACGGGACGATTTGAGCGGAATGG
ACGTTGCTAGAAAGGTCGTGATTGTGGCGAGAGAGATTGGTATCAAGGTC
GAACTTGACCAGGTTCCTGTGGAAAGCCTTGTTCCCAAGGAATTACAGGG
AAGCGATGTGTCTGTGGAAGAATTTATGAAACGCCTTCCCGAATCTGACA
GCGGTCTCACGTCTATGGCCAACGAGGCAAAAGAAGCCGGAGAACTGTTG
CGGTATGTGGGTGTTGTCGATTGCAAGAACAGGAGGTGTGCTGTCGAACT
TCGTCGGTATTCTGAGAGTCATCCCTTCGGAAGACTGCGAGGGTCGGACA
ACATCGTGTCGTTCCGGACCATGCGTTACAATGCCCAACCTCTTGTTGTC
CAGGGCCCTGGAGCCGGTGCAGATGTCACAGCTGCTGGTGTCTTCGGGGA
TCTCCTGCGCCTCGCTGGGTATCTCGGGGCCCCTTCCAGCGAAGATGATG
CAAGCTAA back to topCoding sequence (CDS) from alignment at tig00000073_pilon:511353..513860+ >Ggra7955.t1 ID=Ggra7955.t1|Name=Ggra7955.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2508bp|location=Sequence derived from alignment at tig00000073_pilon:511353..513860+ (Gracilaria gracilis GNS1m male) ATGGGCCGCGTGGCCGACATCATCGCGTCGTGCGCCGCCGCGTCGTCCAA GCTGCTCGTCGTTGTGTCGGCCGCTGCCGGCGTCACCGACGCCATGCACG CCGTTGTCACTGCTGCCGCTTCGCGCGATCCGCACGCGCATTACGCCGAG CAGCTGCAGCTTGTTGCCGACACGCATCGCCGCCTGGCCGAGCAGCTGCT TCCCGACGAGGCGCGCGACGCCTTTTTGGCCACCCTCACCGCCAATATCA AGGACCTCGTCGACCTGCTGCGCGCCACCTGGATTGCGCGCTCCGTGTCT GACCGCATCCGCGATCTCATCGTGGGACATGGCGAGCTGTGGTCTGCTCA GTTGCTGTGGGCTCTGTGCCGCTCGCGCCACCGCCTTGTGTGCTCGTGGA TGGACTCGCGCGATGTGCTCGTCGCCCGCCCGAGCGAGACGTCTATCAAC CGAAAGATTGTCTTGAACGACCCTAGCAAACCGCTTCTGTTCGACTGGCT GCGATCCAACCCCACTGACGTCGTCATTGCTACGGGCTATATCTGCCAGG ATAGCGAGGGCGTTCCTTCTACTCTTGGTCGCAACGGCTCGGATTACTCC GCCTCGGCCTTTGCTAGTCTCTTGTCTGCCGTCGAGCTCAATATCTGGAC AGACGTTGACGGCGTATACTCTGCAGACCCGCGCGTTGTCAACGACGCCA TTGTCATCCCGGACATGAGCTACAAAGAGGCCGCTGAGCTCGCCTACTTT GGAGCAAAGGTACTGCATCCTGACACAATGGCACCTATTATTGAGACCGG TATCCCCATGCGCATTCGAAATACATTCAACAAGGATTTCCCTGGTACTC TTGTGCGGGAGACTGACATGCCGGCAGATCGTGCCTCCGCTCAGTATGAA TACGCTACCCGAGACATGGCGGGCGTTAAGGGCTTTACCACTGTCCAAGA TGTTTCCATTGTCAATATCGAGGGTACGGGAATGATCGGTGTGCCTGGTA TTGCGTCGCGTGCCTTTCAGGCTCTCTTCTCCGAAAACGTGTCTGTCATT CTTATCGCTCAGGCCAGTTCTGAGTTTTCGATATGTATTGCCATTCCCTC TACACAACGTGTGGTGGCCACAAAGTCTATTACGCGCGCTTTTAGGCCAG AACTCGCAGATGGACTCATCTCAACTGTGTCTTCAATACCCGATTGTAGT ATTCTGGCCATGGTCGGTGAGCAGATGCAGCAGCGACCGGGTGTTTCATC TCGCTTGTTTGCCTCGCTGACGCGAGCCGGTGTTAATATTGTTGCAATGG CTCAGGGCTCGTCGGAACACAACATTTCCGTAGTGGTGGATGCGAAGAGC GAGAGTCGGGCACTCAGAGCAGCGCACGCCTCCTTCTACCTTTCTGACCA GACGGTGTCCTTGGGACTCATTGGCCCTGGACTTGTCGGCAGCGCTTTCC TCGAGCAGATTCAAAGCCAACTTGAGACGCTTGAGAAACAGTTTTCTGTG GATTTGAGAGTGAGAGGTATTGCCACATCAAGCAAAATGGTGTTTGGCGA ACCTATAGAGCTTAATGACCAGGCCTGGAAGGGTTCCCTCAAGTCTGACA AGGCCGAACCACTTGACTTGGATTCGTTCGCTGACCGTATTCAAGACATT GCATTGCCCCATGCAGTTATCTGCGACTGTTCAGCTTCAGAAGAAGTATC TGCATACTATGAGAAATGGTTAAAGAGGGGTATCCATATTATAACTCCAA ACAAGAAAGCAAACAGTGGACCACTGCATTACTACCGTGCCATGAGGACA GCCCAACGTCGCTTCAATTCTCATTTCTTATATGAAGCGAATGTGGGTGC TGGGCTCCCAATCATATCATCGATTCGCGATTTGCTACGCACTGGTGATA AGTTCTTGGAAATCGAGGGCATCTTCTCAGGAACTCTGAGTTTCATATTC AACGAGTTCGATGGTTCCGTACCGTTCTCTGCAATCGTCTCCAAAGCAAA GGCCAATGGATACACTGAACCTGATCCACGGGACGATTTGAGCGGAATGG ACGTTGCTAGAAAGGTCGTGATTGTGGCGAGAGAGATTGGTATCAAGGTC GAACTTGACCAGGTTCCTGTGGAAAGCCTTGTTCCCAAGGAATTACAGGG AAGCGATGTGTCTGTGGAAGAATTTATGAAACGCCTTCCCGAATCTGACA GCGGTCTCACGTCTATGGCCAACGAGGCAAAAGAAGCCGGAGAACTGTTG CGGTATGTGGGTGTTGTCGATTGCAAGAACAGGAGGTGTGCTGTCGAACT TCGTCGGTATTCTGAGAGTCATCCCTTCGGAAGACTGCGAGGGTCGGACA ACATCGTGTCGTTCCGGACCATGCGTTACAATGCCCAACCTCTTGTTGTC CAGGGCCCTGGAGCCGGTGCAGATGTCACAGCTGCTGGTGTCTTCGGGGA TCTCCTGCGCCTCGCTGGGTATCTCGGGGCCCCTTCCAGCGAAGATGATG CAAGCTAA back to top
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