Ggra7929.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7929.t1
Unique NameGgra7929.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length376
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:454407..455534 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7929Ggra7929Gracilaria gracilis GNS1m malegenetig00000073_pilon 454407..455534 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7929.t1.start1Ggra7929.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000073_pilon 454407..454409 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7929.t1.CDS1Ggra7929.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000073_pilon 454407..455534 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7929.t1.exon1Ggra7929.t1.exon1Gracilaria gracilis GNS1m maleexontig00000073_pilon 454407..455534 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7929.t1.stop1Ggra7929.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000073_pilon 455532..455534 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7929.t1Ggra7929.t1Gracilaria gracilis GNS1m malepolypeptidetig00000073_pilon 454407..455534 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7929.t1 ID=Ggra7929.t1|Name=Ggra7929.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=376bp
MLRTYSVLLAVRLSRSKPIRRPRSREKELFSFETLKLMREALLAASFSGY
SDRQHTDALLNGTQTQLKLRNLARYVDSEVEQDSFHHAVCSLPQAQHVSD
DVRRLIADKLRAFYESERFRSSEGKKTKLLLVAPLTEHLARYRLYTNYWR
YYLLAGRSSNLYAELCNSANEVHLDRHVVDAGIRAITNAFGTDSVTLKFG
EQFRVFESLLNGKASSMWNKFVASKESTSSITSTGFRWCGRDCSAERIAE
AGGLGGIGALRADPGRLLDASHISSDDFHKVATSLSKEDSQYEQLMQLFD
ALCARTSTGDCREVVKIVWKEGGLCWLRKASVSDICKKAELTEDEAGRIQ
SFARGYFGGWTRNSGHIQLGTGKSV*
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spliced messenger RNA

>Ggra7929.t1 ID=Ggra7929.t1|Name=Ggra7929.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1128bp|location=Sequence derived from alignment at tig00000073_pilon:454407..455534+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTGCGAACATATAGCGTTCTGCTGGCCGTGCGTTTATCTCGTTCCAA
ACCTATTCGCCGTCCAAGATCCCGAGAAAAAGAACTGTTCAGTTTTGAAA
CGCTCAAACTGATGCGCGAAGCGCTTCTTGCCGCTTCTTTTTCTGGCTAT
TCCGATAGACAGCACACAGATGCGTTGCTGAATGGAACGCAGACGCAATT
GAAATTGAGGAACCTTGCTCGTTATGTTGATTCAGAAGTTGAACAAGATT
CGTTTCATCATGCCGTCTGCTCTTTACCACAAGCACAACACGTCTCGGAC
GACGTTCGGAGACTAATAGCGGACAAGCTTCGTGCTTTTTACGAGTCAGA
GCGTTTTCGATCTTCTGAAGGAAAGAAAACCAAACTGCTGCTTGTTGCAC
CACTGACAGAGCACCTAGCTCGTTATCGATTGTACACAAACTATTGGCGG
TACTACCTGCTGGCAGGCCGCTCTTCGAACCTCTACGCTGAGTTATGCAA
TTCGGCGAATGAAGTACATTTAGATAGACATGTAGTTGACGCGGGGATCA
GAGCTATTACGAATGCCTTCGGCACAGATAGTGTGACACTGAAATTCGGG
GAGCAGTTTCGGGTTTTTGAGAGCCTTCTGAACGGGAAAGCTTCTTCTAT
GTGGAACAAGTTTGTAGCCTCAAAGGAGAGCACCAGCAGCATCACCTCAA
CGGGTTTCAGATGGTGTGGACGTGATTGCAGCGCTGAACGGATTGCAGAG
GCAGGCGGTTTGGGGGGTATAGGGGCTCTACGTGCAGACCCGGGGCGTTT
GCTGGACGCAAGCCACATCAGCAGTGATGACTTTCATAAAGTGGCGACGA
GTTTAAGCAAAGAGGATTCCCAATATGAACAATTAATGCAACTGTTTGAT
GCGCTCTGCGCAAGGACATCGACAGGTGACTGTCGAGAAGTAGTGAAAAT
AGTGTGGAAGGAGGGGGGACTTTGTTGGTTGAGGAAAGCATCGGTGAGCG
ATATTTGCAAGAAGGCAGAACTAACTGAAGACGAAGCGGGTCGAATTCAA
AGCTTTGCGCGCGGGTATTTTGGCGGTTGGACTCGCAACAGTGGGCATAT
ACAACTTGGCACGGGAAAGAGTGTCTGA
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protein sequence of Ggra7929.t1

>Ggra7929.t1 ID=Ggra7929.t1|Name=Ggra7929.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=376bp
MLRTYSVLLAVRLSRSKPIRRPRSREKELFSFETLKLMREALLAASFSGY
SDRQHTDALLNGTQTQLKLRNLARYVDSEVEQDSFHHAVCSLPQAQHVSD
DVRRLIADKLRAFYESERFRSSEGKKTKLLLVAPLTEHLARYRLYTNYWR
YYLLAGRSSNLYAELCNSANEVHLDRHVVDAGIRAITNAFGTDSVTLKFG
EQFRVFESLLNGKASSMWNKFVASKESTSSITSTGFRWCGRDCSAERIAE
AGGLGGIGALRADPGRLLDASHISSDDFHKVATSLSKEDSQYEQLMQLFD
ALCARTSTGDCREVVKIVWKEGGLCWLRKASVSDICKKAELTEDEAGRIQ
SFARGYFGGWTRNSGHIQLGTGKSV*
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mRNA from alignment at tig00000073_pilon:454407..455534+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7929.t1 ID=Ggra7929.t1|Name=Ggra7929.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1128bp|location=Sequence derived from alignment at tig00000073_pilon:454407..455534+ (Gracilaria gracilis GNS1m male)
ATGTTGCGAACATATAGCGTTCTGCTGGCCGTGCGTTTATCTCGTTCCAA
ACCTATTCGCCGTCCAAGATCCCGAGAAAAAGAACTGTTCAGTTTTGAAA
CGCTCAAACTGATGCGCGAAGCGCTTCTTGCCGCTTCTTTTTCTGGCTAT
TCCGATAGACAGCACACAGATGCGTTGCTGAATGGAACGCAGACGCAATT
GAAATTGAGGAACCTTGCTCGTTATGTTGATTCAGAAGTTGAACAAGATT
CGTTTCATCATGCCGTCTGCTCTTTACCACAAGCACAACACGTCTCGGAC
GACGTTCGGAGACTAATAGCGGACAAGCTTCGTGCTTTTTACGAGTCAGA
GCGTTTTCGATCTTCTGAAGGAAAGAAAACCAAACTGCTGCTTGTTGCAC
CACTGACAGAGCACCTAGCTCGTTATCGATTGTACACAAACTATTGGCGG
TACTACCTGCTGGCAGGCCGCTCTTCGAACCTCTACGCTGAGTTATGCAA
TTCGGCGAATGAAGTACATTTAGATAGACATGTAGTTGACGCGGGGATCA
GAGCTATTACGAATGCCTTCGGCACAGATAGTGTGACACTGAAATTCGGG
GAGCAGTTTCGGGTTTTTGAGAGCCTTCTGAACGGGAAAGCTTCTTCTAT
GTGGAACAAGTTTGTAGCCTCAAAGGAGAGCACCAGCAGCATCACCTCAA
CGGGTTTCAGATGGTGTGGACGTGATTGCAGCGCTGAACGGATTGCAGAG
GCAGGCGGTTTGGGGGGTATAGGGGCTCTACGTGCAGACCCGGGGCGTTT
GCTGGACGCAAGCCACATCAGCAGTGATGACTTTCATAAAGTGGCGACGA
GTTTAAGCAAAGAGGATTCCCAATATGAACAATTAATGCAACTGTTTGAT
GCGCTCTGCGCAAGGACATCGACAGGTGACTGTCGAGAAGTAGTGAAAAT
AGTGTGGAAGGAGGGGGGACTTTGTTGGTTGAGGAAAGCATCGGTGAGCG
ATATTTGCAAGAAGGCAGAACTAACTGAAGACGAAGCGGGTCGAATTCAA
AGCTTTGCGCGCGGGTATTTTGGCGGTTGGACTCGCAACAGTGGGCATAT
ACAACTTGGCACGGGAAAGAGTGTCTGA
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Coding sequence (CDS) from alignment at tig00000073_pilon:454407..455534+

>Ggra7929.t1 ID=Ggra7929.t1|Name=Ggra7929.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1128bp|location=Sequence derived from alignment at tig00000073_pilon:454407..455534+ (Gracilaria gracilis GNS1m male)
ATGTTGCGAACATATAGCGTTCTGCTGGCCGTGCGTTTATCTCGTTCCAA
ACCTATTCGCCGTCCAAGATCCCGAGAAAAAGAACTGTTCAGTTTTGAAA
CGCTCAAACTGATGCGCGAAGCGCTTCTTGCCGCTTCTTTTTCTGGCTAT
TCCGATAGACAGCACACAGATGCGTTGCTGAATGGAACGCAGACGCAATT
GAAATTGAGGAACCTTGCTCGTTATGTTGATTCAGAAGTTGAACAAGATT
CGTTTCATCATGCCGTCTGCTCTTTACCACAAGCACAACACGTCTCGGAC
GACGTTCGGAGACTAATAGCGGACAAGCTTCGTGCTTTTTACGAGTCAGA
GCGTTTTCGATCTTCTGAAGGAAAGAAAACCAAACTGCTGCTTGTTGCAC
CACTGACAGAGCACCTAGCTCGTTATCGATTGTACACAAACTATTGGCGG
TACTACCTGCTGGCAGGCCGCTCTTCGAACCTCTACGCTGAGTTATGCAA
TTCGGCGAATGAAGTACATTTAGATAGACATGTAGTTGACGCGGGGATCA
GAGCTATTACGAATGCCTTCGGCACAGATAGTGTGACACTGAAATTCGGG
GAGCAGTTTCGGGTTTTTGAGAGCCTTCTGAACGGGAAAGCTTCTTCTAT
GTGGAACAAGTTTGTAGCCTCAAAGGAGAGCACCAGCAGCATCACCTCAA
CGGGTTTCAGATGGTGTGGACGTGATTGCAGCGCTGAACGGATTGCAGAG
GCAGGCGGTTTGGGGGGTATAGGGGCTCTACGTGCAGACCCGGGGCGTTT
GCTGGACGCAAGCCACATCAGCAGTGATGACTTTCATAAAGTGGCGACGA
GTTTAAGCAAAGAGGATTCCCAATATGAACAATTAATGCAACTGTTTGAT
GCGCTCTGCGCAAGGACATCGACAGGTGACTGTCGAGAAGTAGTGAAAAT
AGTGTGGAAGGAGGGGGGACTTTGTTGGTTGAGGAAAGCATCGGTGAGCG
ATATTTGCAAGAAGGCAGAACTAACTGAAGACGAAGCGGGTCGAATTCAA
AGCTTTGCGCGCGGGTATTTTGGCGGTTGGACTCGCAACAGTGGGCATAT
ACAACTTGGCACGGGAAAGAGTGTCTGA
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