Ggra7747.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7747.t1
Unique NameGgra7747.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length221
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:324033..324695 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7747Ggra7747Gracilaria gracilis GNS1m malegenetig00000088_pilon 324033..324695 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7747.t1.stop1Ggra7747.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000088_pilon 324033..324035 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7747.t1.CDS1Ggra7747.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000088_pilon 324033..324695 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7747.t1.exon1Ggra7747.t1.exon1Gracilaria gracilis GNS1m maleexontig00000088_pilon 324033..324695 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7747.t1.start1Ggra7747.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000088_pilon 324693..324695 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7747.t1Ggra7747.t1Gracilaria gracilis GNS1m malepolypeptidetig00000088_pilon 324033..324695 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7747.t1 ID=Ggra7747.t1|Name=Ggra7747.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=221bp
MALFMPGMPDNLDEPMSDAHSDGNSTIPDDEFIHVSPSAFQPWRAEINRL
ALELTAEQPLSKRTETERNHNRDVARITCNYQLVWLHDCIVDVEKSLPTG
SVAKAPAQDFFNALYILGPAQFIKWSHQVPKPDATDAAPPEELLNDLGMI
HTRSALRRAIEQEDGDLLENAVKQLILLKELLQESPAPTLLSSLTPGTAR
VLYEHLRSRLDTLPTLLPQI*
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spliced messenger RNA

>Ggra7747.t1 ID=Ggra7747.t1|Name=Ggra7747.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=663bp|location=Sequence derived from alignment at tig00000088_pilon:324033..324695- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCATTGTTCATGCCAGGAATGCCAGACAATCTGGATGAGCCCATGTC
GGATGCGCATTCCGATGGAAATTCCACCATCCCCGACGATGAATTCATAC
ATGTTTCGCCGAGTGCCTTTCAACCCTGGCGAGCGGAAATCAACCGGCTA
GCTTTGGAGCTCACTGCGGAACAACCACTGTCCAAACGCACCGAAACAGA
ACGTAACCACAACAGGGATGTTGCCAGAATCACTTGCAACTATCAACTGG
TCTGGCTTCACGATTGTATCGTCGATGTTGAAAAGTCCTTGCCGACAGGT
AGTGTGGCCAAGGCTCCCGCTCAAGATTTCTTCAATGCTTTATACATTTT
AGGTCCTGCCCAATTTATAAAGTGGAGTCACCAGGTTCCTAAACCAGATG
CTACCGATGCTGCACCTCCCGAAGAGCTATTGAACGACCTTGGAATGATC
CACACCCGCAGTGCTCTCAGACGTGCTATCGAGCAAGAAGATGGCGACTT
GCTGGAAAATGCCGTCAAACAGCTCATACTTTTGAAGGAGCTGCTGCAAG
AATCTCCTGCACCGACTCTTCTTTCTTCCCTAACTCCTGGTACTGCACGC
GTTCTGTATGAACATCTGAGGTCAAGACTGGATACATTACCAACTCTGCT
ACCGCAGATTTAG
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protein sequence of Ggra7747.t1

>Ggra7747.t1 ID=Ggra7747.t1|Name=Ggra7747.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=221bp
MALFMPGMPDNLDEPMSDAHSDGNSTIPDDEFIHVSPSAFQPWRAEINRL
ALELTAEQPLSKRTETERNHNRDVARITCNYQLVWLHDCIVDVEKSLPTG
SVAKAPAQDFFNALYILGPAQFIKWSHQVPKPDATDAAPPEELLNDLGMI
HTRSALRRAIEQEDGDLLENAVKQLILLKELLQESPAPTLLSSLTPGTAR
VLYEHLRSRLDTLPTLLPQI*
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mRNA from alignment at tig00000088_pilon:324033..324695-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7747.t1 ID=Ggra7747.t1|Name=Ggra7747.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=663bp|location=Sequence derived from alignment at tig00000088_pilon:324033..324695- (Gracilaria gracilis GNS1m male)
ATGGCATTGTTCATGCCAGGAATGCCAGACAATCTGGATGAGCCCATGTC
GGATGCGCATTCCGATGGAAATTCCACCATCCCCGACGATGAATTCATAC
ATGTTTCGCCGAGTGCCTTTCAACCCTGGCGAGCGGAAATCAACCGGCTA
GCTTTGGAGCTCACTGCGGAACAACCACTGTCCAAACGCACCGAAACAGA
ACGTAACCACAACAGGGATGTTGCCAGAATCACTTGCAACTATCAACTGG
TCTGGCTTCACGATTGTATCGTCGATGTTGAAAAGTCCTTGCCGACAGGT
AGTGTGGCCAAGGCTCCCGCTCAAGATTTCTTCAATGCTTTATACATTTT
AGGTCCTGCCCAATTTATAAAGTGGAGTCACCAGGTTCCTAAACCAGATG
CTACCGATGCTGCACCTCCCGAAGAGCTATTGAACGACCTTGGAATGATC
CACACCCGCAGTGCTCTCAGACGTGCTATCGAGCAAGAAGATGGCGACTT
GCTGGAAAATGCCGTCAAACAGCTCATACTTTTGAAGGAGCTGCTGCAAG
AATCTCCTGCACCGACTCTTCTTTCTTCCCTAACTCCTGGTACTGCACGC
GTTCTGTATGAACATCTGAGGTCAAGACTGGATACATTACCAACTCTGCT
ACCGCAGATTTAG
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Coding sequence (CDS) from alignment at tig00000088_pilon:324033..324695-

>Ggra7747.t1 ID=Ggra7747.t1|Name=Ggra7747.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=663bp|location=Sequence derived from alignment at tig00000088_pilon:324033..324695- (Gracilaria gracilis GNS1m male)
ATGGCATTGTTCATGCCAGGAATGCCAGACAATCTGGATGAGCCCATGTC
GGATGCGCATTCCGATGGAAATTCCACCATCCCCGACGATGAATTCATAC
ATGTTTCGCCGAGTGCCTTTCAACCCTGGCGAGCGGAAATCAACCGGCTA
GCTTTGGAGCTCACTGCGGAACAACCACTGTCCAAACGCACCGAAACAGA
ACGTAACCACAACAGGGATGTTGCCAGAATCACTTGCAACTATCAACTGG
TCTGGCTTCACGATTGTATCGTCGATGTTGAAAAGTCCTTGCCGACAGGT
AGTGTGGCCAAGGCTCCCGCTCAAGATTTCTTCAATGCTTTATACATTTT
AGGTCCTGCCCAATTTATAAAGTGGAGTCACCAGGTTCCTAAACCAGATG
CTACCGATGCTGCACCTCCCGAAGAGCTATTGAACGACCTTGGAATGATC
CACACCCGCAGTGCTCTCAGACGTGCTATCGAGCAAGAAGATGGCGACTT
GCTGGAAAATGCCGTCAAACAGCTCATACTTTTGAAGGAGCTGCTGCAAG
AATCTCCTGCACCGACTCTTCTTTCTTCCCTAACTCCTGGTACTGCACGC
GTTCTGTATGAACATCTGAGGTCAAGACTGGATACATTACCAACTCTGCT
ACCGCAGATTTAG
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