Ggra7664.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7664.t1
Unique NameGgra7664.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length299
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000206_piloncontigtig00000206_pilon:139104..140000 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7664Ggra7664Gracilaria gracilis GNS1m malegenetig00000206_pilon 139104..140000 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7664.t1.stop1Ggra7664.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000206_pilon 139104..139106 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7664.t1.CDS1Ggra7664.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000206_pilon 139104..140000 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7664.t1.exon1Ggra7664.t1.exon1Gracilaria gracilis GNS1m maleexontig00000206_pilon 139104..140000 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7664.t1.start1Ggra7664.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000206_pilon 139998..140000 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7664.t1Ggra7664.t1Gracilaria gracilis GNS1m malepolypeptidetig00000206_pilon 139104..140000 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7664.t1 ID=Ggra7664.t1|Name=Ggra7664.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=299bp
MGDQIVQQLKRESQRLLLQHGNHARDLLKKQHANLPPALRRRATLVDKGL
KHGIRSAEQRFEARAQPDAERSGPSAALRKLQQRVRPRGGRHNGRHNGRS
ADALRRAQRRYSNAAAERDEARRHSARRRYSDQYDDEDYYHTRHRSRSTH
GHNHRSSRRKHHRRSSRRYRTPSPSPSRSRSRSRSRSPPRRRRTSAAARR
PSSSRRYPSPPPARPAPPSTRYTPPPPPGYPSSPSGASATSPRMSYNGVA
PPPPQRRPSIRAFLMEKMHDPRVQAKVSQGALDLQDHFFRSMARDRAH*
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spliced messenger RNA

>Ggra7664.t1 ID=Ggra7664.t1|Name=Ggra7664.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=897bp|location=Sequence derived from alignment at tig00000206_pilon:139104..140000- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCGACCAAATCGTGCAGCAGCTCAAGCGCGAGTCGCAGCGGCTGCT
GCTGCAGCACGGCAACCACGCGCGCGACCTGCTCAAGAAGCAGCACGCCA
ACCTGCCGCCCGCGCTGCGGCGCCGCGCCACGCTGGTGGACAAGGGGCTC
AAGCACGGCATCCGCTCGGCCGAGCAGCGCTTCGAAGCGCGCGCGCAGCC
GGACGCCGAACGCAGCGGGCCGTCGGCCGCGCTGCGCAAGCTGCAGCAGC
GCGTGCGCCCGCGCGGCGGCCGCCACAACGGCCGCCACAACGGCCGCTCC
GCCGACGCGCTTCGCCGCGCGCAGCGCCGCTACTCAAACGCCGCCGCGGA
GCGCGACGAGGCGCGCCGCCATTCTGCGCGCCGCCGCTATTCAGACCAGT
ATGACGATGAAGATTACTACCACACGCGCCATCGTTCGCGTTCTACGCAC
GGGCACAACCATCGGAGCTCGCGTCGAAAGCATCATCGTCGTTCGTCGCG
TCGCTATCGCACCCCGTCTCCGTCTCCGTCGCGCTCGCGCTCGCGCTCGC
GCTCGCGCTCGCCGCCGCGGAGAAGACGTACCTCTGCGGCCGCCAGGCGT
CCATCGTCGTCTCGTCGCTATCCATCGCCGCCGCCTGCGCGCCCAGCGCC
GCCGTCTACCCGCTATACACCGCCGCCGCCGCCTGGTTATCCATCGTCGC
CCTCCGGCGCGTCGGCCACTTCGCCTCGCATGTCGTACAACGGCGTGGCT
CCGCCTCCGCCGCAGAGACGCCCTTCAATCCGCGCCTTCTTGATGGAGAA
GATGCACGACCCCCGCGTGCAGGCCAAGGTCAGTCAGGGTGCGCTGGACC
TTCAGGATCATTTTTTCAGGTCCATGGCCAGAGACCGCGCCCATTGA
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protein sequence of Ggra7664.t1

>Ggra7664.t1 ID=Ggra7664.t1|Name=Ggra7664.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=299bp
MGDQIVQQLKRESQRLLLQHGNHARDLLKKQHANLPPALRRRATLVDKGL
KHGIRSAEQRFEARAQPDAERSGPSAALRKLQQRVRPRGGRHNGRHNGRS
ADALRRAQRRYSNAAAERDEARRHSARRRYSDQYDDEDYYHTRHRSRSTH
GHNHRSSRRKHHRRSSRRYRTPSPSPSRSRSRSRSRSPPRRRRTSAAARR
PSSSRRYPSPPPARPAPPSTRYTPPPPPGYPSSPSGASATSPRMSYNGVA
PPPPQRRPSIRAFLMEKMHDPRVQAKVSQGALDLQDHFFRSMARDRAH*
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mRNA from alignment at tig00000206_pilon:139104..140000-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7664.t1 ID=Ggra7664.t1|Name=Ggra7664.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=897bp|location=Sequence derived from alignment at tig00000206_pilon:139104..140000- (Gracilaria gracilis GNS1m male)
ATGGGCGACCAAATCGTGCAGCAGCTCAAGCGCGAGTCGCAGCGGCTGCT
GCTGCAGCACGGCAACCACGCGCGCGACCTGCTCAAGAAGCAGCACGCCA
ACCTGCCGCCCGCGCTGCGGCGCCGCGCCACGCTGGTGGACAAGGGGCTC
AAGCACGGCATCCGCTCGGCCGAGCAGCGCTTCGAAGCGCGCGCGCAGCC
GGACGCCGAACGCAGCGGGCCGTCGGCCGCGCTGCGCAAGCTGCAGCAGC
GCGTGCGCCCGCGCGGCGGCCGCCACAACGGCCGCCACAACGGCCGCTCC
GCCGACGCGCTTCGCCGCGCGCAGCGCCGCTACTCAAACGCCGCCGCGGA
GCGCGACGAGGCGCGCCGCCATTCTGCGCGCCGCCGCTATTCAGACCAGT
ATGACGATGAAGATTACTACCACACGCGCCATCGTTCGCGTTCTACGCAC
GGGCACAACCATCGGAGCTCGCGTCGAAAGCATCATCGTCGTTCGTCGCG
TCGCTATCGCACCCCGTCTCCGTCTCCGTCGCGCTCGCGCTCGCGCTCGC
GCTCGCGCTCGCCGCCGCGGAGAAGACGTACCTCTGCGGCCGCCAGGCGT
CCATCGTCGTCTCGTCGCTATCCATCGCCGCCGCCTGCGCGCCCAGCGCC
GCCGTCTACCCGCTATACACCGCCGCCGCCGCCTGGTTATCCATCGTCGC
CCTCCGGCGCGTCGGCCACTTCGCCTCGCATGTCGTACAACGGCGTGGCT
CCGCCTCCGCCGCAGAGACGCCCTTCAATCCGCGCCTTCTTGATGGAGAA
GATGCACGACCCCCGCGTGCAGGCCAAGGTCAGTCAGGGTGCGCTGGACC
TTCAGGATCATTTTTTCAGGTCCATGGCCAGAGACCGCGCCCATTGA
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Coding sequence (CDS) from alignment at tig00000206_pilon:139104..140000-

>Ggra7664.t1 ID=Ggra7664.t1|Name=Ggra7664.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=897bp|location=Sequence derived from alignment at tig00000206_pilon:139104..140000- (Gracilaria gracilis GNS1m male)
ATGGGCGACCAAATCGTGCAGCAGCTCAAGCGCGAGTCGCAGCGGCTGCT
GCTGCAGCACGGCAACCACGCGCGCGACCTGCTCAAGAAGCAGCACGCCA
ACCTGCCGCCCGCGCTGCGGCGCCGCGCCACGCTGGTGGACAAGGGGCTC
AAGCACGGCATCCGCTCGGCCGAGCAGCGCTTCGAAGCGCGCGCGCAGCC
GGACGCCGAACGCAGCGGGCCGTCGGCCGCGCTGCGCAAGCTGCAGCAGC
GCGTGCGCCCGCGCGGCGGCCGCCACAACGGCCGCCACAACGGCCGCTCC
GCCGACGCGCTTCGCCGCGCGCAGCGCCGCTACTCAAACGCCGCCGCGGA
GCGCGACGAGGCGCGCCGCCATTCTGCGCGCCGCCGCTATTCAGACCAGT
ATGACGATGAAGATTACTACCACACGCGCCATCGTTCGCGTTCTACGCAC
GGGCACAACCATCGGAGCTCGCGTCGAAAGCATCATCGTCGTTCGTCGCG
TCGCTATCGCACCCCGTCTCCGTCTCCGTCGCGCTCGCGCTCGCGCTCGC
GCTCGCGCTCGCCGCCGCGGAGAAGACGTACCTCTGCGGCCGCCAGGCGT
CCATCGTCGTCTCGTCGCTATCCATCGCCGCCGCCTGCGCGCCCAGCGCC
GCCGTCTACCCGCTATACACCGCCGCCGCCGCCTGGTTATCCATCGTCGC
CCTCCGGCGCGTCGGCCACTTCGCCTCGCATGTCGTACAACGGCGTGGCT
CCGCCTCCGCCGCAGAGACGCCCTTCAATCCGCGCCTTCTTGATGGAGAA
GATGCACGACCCCCGCGTGCAGGCCAAGGTCAGTCAGGGTGCGCTGGACC
TTCAGGATCATTTTTTCAGGTCCATGGCCAGAGACCGCGCCCATTGA
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