Ggra7661.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7661.t1
Unique NameGgra7661.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length518
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000206_piloncontigtig00000206_pilon:129179..130732 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog45157.CML167CT
Preferred nameGMPS
PFAMsGATase,GMP_synt_C,NAD_synthase
Max annot lvl2759|Eukaryota
KEGG rclassRC00010,RC00204
KEGG koko:K01951,ko:K04257
KEGG ReactionR01230,R01231,R08244
KEGG Pathwayko00230,ko00983,ko01100,ko04740,map00230,map00983,map01100,map04740
KEGG ModuleM00050
GOsGO:0000902,GO:0000904,GO:0001101,GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005700,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006144,GO:0006163,GO:0006164,GO:0006177,GO:0006325,GO:0006464,GO:0006508,GO:0006520,GO:0006541,GO:0006543,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006935,GO:0006996,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0008047,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009112,GO:0009113,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009605,GO:0009653,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010604,GO:0010952,GO:0016043,GO:0016054,GO:0016504,GO:0016569,GO:0016570,GO:0016578,GO:0016579,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0022008,GO:0030030,GO:0030154,GO:0030162,GO:0030182,GO:0030234,GO:0031175,GO:0031323,GO:0031325,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0035800,GO:0036211,GO:0040011,GO:0042221,GO:0042278,GO:0042330,GO:0042440,GO:0042451,GO:0042455,GO:0042493,GO:0042802,GO:0043085,GO:0043170,GO:0043200,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043436,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045862,GO:0046037,GO:0046112,GO:0046128,GO:0046129,GO:0046148,GO:0046390,GO:0046395,GO:0046483,GO:0048468,GO:0048518,GO:0048522,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051276,GO:0051336,GO:0051345,GO:0052547,GO:0055086,GO:0060255,GO:0061134,GO:0061564,GO:0065007,GO:0065009,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0072521,GO:0072522,GO:0080090,GO:0090407,GO:0097485,GO:0098772,GO:0120036,GO:0120039,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901367,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:2000152,GO:2000158
Evalue5.56e-234
EggNOG OGsCOG0519@1|root,KOG1622@2759|Eukaryota
EC6.3.5.2
DescriptionGMP synthase (glutamine-hydrolyzing) activity
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko04030
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7661Ggra7661Gracilaria gracilis GNS1m malegenetig00000206_pilon 129179..130732 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7661.t1.start1Ggra7661.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000206_pilon 129179..129181 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7661.t1.CDS1Ggra7661.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000206_pilon 129179..130732 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7661.t1.exon1Ggra7661.t1.exon1Gracilaria gracilis GNS1m maleexontig00000206_pilon 129179..130732 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7661.t1.stop1Ggra7661.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000206_pilon 130730..130732 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7661.t1Ggra7661.t1Gracilaria gracilis GNS1m malepolypeptidetig00000206_pilon 129179..130732 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7661.t1 ID=Ggra7661.t1|Name=Ggra7661.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=518bp
MEDLFTAGHELVVILDFGSQYTHLIARRLRECNVYCELHSYDRSVSEIQA
LKPKGIILSGGPSSVYDNESPHAAEGLLDLGVPVLGICYGLQEMAHTLGG
EVSPGEKKEYGYAEIRTSNGFGLFDGMADHFAVWMSHGDKLSKLPDGFCD
IATTDNTEHAAVADTKRKLYGLQFHPEVTHTEFGTKILHNFVTKICGCKC
DWSMSDFLGEAKLAIREKVGSGMVIGAVSGGVDSTVAAVLMKEAIGDQFH
AFLVDNGVLRKNEAAEVMDRLANRCGVNLKLIDATETFLQRLQGVTDPEK
KRKVIGNTFIDCFEVEASKLKADFLLQGTLYPDVIESVSHKGPSATIKTH
HNVGGLPAHMKLQLIEPLRFLFKDEVRSLGLELGIESESIYRHPFPGPGL
AIRILGEVTAKRLRALREADTIFLHELRSAGLYRDIGQAFAALLPVKAVG
VMGDKRTYEEVIVLRAVKTKDFMTADWVDLPTPLLRLISSRIVNEIPGVN
RVTYDITSKPPGTIEWE*
back to top

spliced messenger RNA

>Ggra7661.t1 ID=Ggra7661.t1|Name=Ggra7661.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1554bp|location=Sequence derived from alignment at tig00000206_pilon:129179..130732+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGGACTTGTTCACAGCGGGCCATGAGCTCGTTGTTATCCTGGATTT
TGGTTCGCAGTATACGCATTTGATTGCTCGGCGCTTGAGAGAATGCAATG
TCTATTGTGAGCTTCATTCCTACGATCGCAGTGTTTCGGAAATTCAGGCA
CTTAAGCCGAAAGGAATCATATTATCTGGAGGACCGTCTTCTGTCTATGA
TAACGAATCCCCACATGCAGCTGAAGGCCTTCTTGATTTGGGTGTTCCTG
TCCTTGGCATCTGCTATGGCCTCCAAGAAATGGCCCATACTCTGGGAGGT
GAGGTCTCACCAGGGGAAAAGAAGGAATACGGCTACGCGGAAATACGAAC
GTCCAATGGGTTTGGACTTTTTGATGGGATGGCCGACCATTTTGCAGTAT
GGATGAGCCATGGAGATAAACTTTCCAAACTCCCAGACGGATTTTGTGAT
ATTGCAACCACGGACAATACAGAACATGCTGCAGTGGCAGATACTAAGCG
GAAGCTCTACGGACTTCAGTTCCACCCGGAGGTTACACATACTGAGTTTG
GTACGAAAATCCTTCACAACTTTGTGACCAAGATCTGCGGCTGCAAATGT
GACTGGTCCATGTCAGATTTTCTTGGCGAAGCGAAGTTGGCTATTCGAGA
GAAGGTTGGAAGCGGTATGGTGATTGGAGCCGTGTCTGGTGGGGTGGACT
CAACTGTTGCTGCCGTCCTCATGAAAGAAGCTATCGGAGACCAATTTCAC
GCGTTTTTGGTTGATAATGGCGTGCTGAGGAAGAATGAAGCAGCCGAAGT
TATGGATCGGCTGGCCAACCGATGTGGCGTTAATCTAAAGCTTATCGACG
CCACAGAAACGTTTCTTCAAAGGTTGCAAGGTGTAACAGACCCGGAAAAG
AAGAGAAAAGTTATCGGAAACACTTTCATCGATTGCTTCGAAGTGGAGGC
ATCCAAACTAAAAGCTGACTTTCTACTACAAGGCACCCTTTACCCGGACG
TGATCGAATCTGTAAGTCATAAAGGGCCGTCTGCAACGATCAAGACCCAT
CACAATGTTGGTGGTTTACCAGCCCATATGAAACTGCAGTTGATAGAACC
GCTGCGTTTCTTGTTCAAAGACGAAGTGCGAAGCCTTGGATTGGAGTTGG
GTATTGAGAGTGAAAGCATCTACAGGCACCCATTCCCAGGACCTGGACTG
GCTATTCGAATCTTGGGCGAGGTAACAGCAAAGAGGCTGAGAGCTCTGCG
CGAAGCCGATACTATCTTCCTACATGAACTTCGATCTGCTGGATTGTATC
GGGACATTGGACAAGCTTTCGCAGCGCTCCTACCTGTGAAAGCTGTTGGT
GTGATGGGCGATAAACGTACTTATGAGGAAGTTATTGTTCTGAGAGCAGT
GAAGACAAAAGATTTCATGACAGCCGATTGGGTGGACCTCCCAACACCTC
TACTGCGATTGATATCCTCCAGGATTGTGAACGAGATCCCCGGCGTGAAC
CGAGTCACCTATGATATCACGTCGAAGCCTCCTGGAACCATCGAGTGGGA
ATAA
back to top

protein sequence of Ggra7661.t1

>Ggra7661.t1 ID=Ggra7661.t1|Name=Ggra7661.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=518bp
MEDLFTAGHELVVILDFGSQYTHLIARRLRECNVYCELHSYDRSVSEIQA
LKPKGIILSGGPSSVYDNESPHAAEGLLDLGVPVLGICYGLQEMAHTLGG
EVSPGEKKEYGYAEIRTSNGFGLFDGMADHFAVWMSHGDKLSKLPDGFCD
IATTDNTEHAAVADTKRKLYGLQFHPEVTHTEFGTKILHNFVTKICGCKC
DWSMSDFLGEAKLAIREKVGSGMVIGAVSGGVDSTVAAVLMKEAIGDQFH
AFLVDNGVLRKNEAAEVMDRLANRCGVNLKLIDATETFLQRLQGVTDPEK
KRKVIGNTFIDCFEVEASKLKADFLLQGTLYPDVIESVSHKGPSATIKTH
HNVGGLPAHMKLQLIEPLRFLFKDEVRSLGLELGIESESIYRHPFPGPGL
AIRILGEVTAKRLRALREADTIFLHELRSAGLYRDIGQAFAALLPVKAVG
VMGDKRTYEEVIVLRAVKTKDFMTADWVDLPTPLLRLISSRIVNEIPGVN
RVTYDITSKPPGTIEWE*
back to top

mRNA from alignment at tig00000206_pilon:129179..130732+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7661.t1 ID=Ggra7661.t1|Name=Ggra7661.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1554bp|location=Sequence derived from alignment at tig00000206_pilon:129179..130732+ (Gracilaria gracilis GNS1m male)
ATGGAGGACTTGTTCACAGCGGGCCATGAGCTCGTTGTTATCCTGGATTT
TGGTTCGCAGTATACGCATTTGATTGCTCGGCGCTTGAGAGAATGCAATG
TCTATTGTGAGCTTCATTCCTACGATCGCAGTGTTTCGGAAATTCAGGCA
CTTAAGCCGAAAGGAATCATATTATCTGGAGGACCGTCTTCTGTCTATGA
TAACGAATCCCCACATGCAGCTGAAGGCCTTCTTGATTTGGGTGTTCCTG
TCCTTGGCATCTGCTATGGCCTCCAAGAAATGGCCCATACTCTGGGAGGT
GAGGTCTCACCAGGGGAAAAGAAGGAATACGGCTACGCGGAAATACGAAC
GTCCAATGGGTTTGGACTTTTTGATGGGATGGCCGACCATTTTGCAGTAT
GGATGAGCCATGGAGATAAACTTTCCAAACTCCCAGACGGATTTTGTGAT
ATTGCAACCACGGACAATACAGAACATGCTGCAGTGGCAGATACTAAGCG
GAAGCTCTACGGACTTCAGTTCCACCCGGAGGTTACACATACTGAGTTTG
GTACGAAAATCCTTCACAACTTTGTGACCAAGATCTGCGGCTGCAAATGT
GACTGGTCCATGTCAGATTTTCTTGGCGAAGCGAAGTTGGCTATTCGAGA
GAAGGTTGGAAGCGGTATGGTGATTGGAGCCGTGTCTGGTGGGGTGGACT
CAACTGTTGCTGCCGTCCTCATGAAAGAAGCTATCGGAGACCAATTTCAC
GCGTTTTTGGTTGATAATGGCGTGCTGAGGAAGAATGAAGCAGCCGAAGT
TATGGATCGGCTGGCCAACCGATGTGGCGTTAATCTAAAGCTTATCGACG
CCACAGAAACGTTTCTTCAAAGGTTGCAAGGTGTAACAGACCCGGAAAAG
AAGAGAAAAGTTATCGGAAACACTTTCATCGATTGCTTCGAAGTGGAGGC
ATCCAAACTAAAAGCTGACTTTCTACTACAAGGCACCCTTTACCCGGACG
TGATCGAATCTGTAAGTCATAAAGGGCCGTCTGCAACGATCAAGACCCAT
CACAATGTTGGTGGTTTACCAGCCCATATGAAACTGCAGTTGATAGAACC
GCTGCGTTTCTTGTTCAAAGACGAAGTGCGAAGCCTTGGATTGGAGTTGG
GTATTGAGAGTGAAAGCATCTACAGGCACCCATTCCCAGGACCTGGACTG
GCTATTCGAATCTTGGGCGAGGTAACAGCAAAGAGGCTGAGAGCTCTGCG
CGAAGCCGATACTATCTTCCTACATGAACTTCGATCTGCTGGATTGTATC
GGGACATTGGACAAGCTTTCGCAGCGCTCCTACCTGTGAAAGCTGTTGGT
GTGATGGGCGATAAACGTACTTATGAGGAAGTTATTGTTCTGAGAGCAGT
GAAGACAAAAGATTTCATGACAGCCGATTGGGTGGACCTCCCAACACCTC
TACTGCGATTGATATCCTCCAGGATTGTGAACGAGATCCCCGGCGTGAAC
CGAGTCACCTATGATATCACGTCGAAGCCTCCTGGAACCATCGAGTGGGA
ATAA
back to top

Coding sequence (CDS) from alignment at tig00000206_pilon:129179..130732+

>Ggra7661.t1 ID=Ggra7661.t1|Name=Ggra7661.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1554bp|location=Sequence derived from alignment at tig00000206_pilon:129179..130732+ (Gracilaria gracilis GNS1m male)
ATGGAGGACTTGTTCACAGCGGGCCATGAGCTCGTTGTTATCCTGGATTT
TGGTTCGCAGTATACGCATTTGATTGCTCGGCGCTTGAGAGAATGCAATG
TCTATTGTGAGCTTCATTCCTACGATCGCAGTGTTTCGGAAATTCAGGCA
CTTAAGCCGAAAGGAATCATATTATCTGGAGGACCGTCTTCTGTCTATGA
TAACGAATCCCCACATGCAGCTGAAGGCCTTCTTGATTTGGGTGTTCCTG
TCCTTGGCATCTGCTATGGCCTCCAAGAAATGGCCCATACTCTGGGAGGT
GAGGTCTCACCAGGGGAAAAGAAGGAATACGGCTACGCGGAAATACGAAC
GTCCAATGGGTTTGGACTTTTTGATGGGATGGCCGACCATTTTGCAGTAT
GGATGAGCCATGGAGATAAACTTTCCAAACTCCCAGACGGATTTTGTGAT
ATTGCAACCACGGACAATACAGAACATGCTGCAGTGGCAGATACTAAGCG
GAAGCTCTACGGACTTCAGTTCCACCCGGAGGTTACACATACTGAGTTTG
GTACGAAAATCCTTCACAACTTTGTGACCAAGATCTGCGGCTGCAAATGT
GACTGGTCCATGTCAGATTTTCTTGGCGAAGCGAAGTTGGCTATTCGAGA
GAAGGTTGGAAGCGGTATGGTGATTGGAGCCGTGTCTGGTGGGGTGGACT
CAACTGTTGCTGCCGTCCTCATGAAAGAAGCTATCGGAGACCAATTTCAC
GCGTTTTTGGTTGATAATGGCGTGCTGAGGAAGAATGAAGCAGCCGAAGT
TATGGATCGGCTGGCCAACCGATGTGGCGTTAATCTAAAGCTTATCGACG
CCACAGAAACGTTTCTTCAAAGGTTGCAAGGTGTAACAGACCCGGAAAAG
AAGAGAAAAGTTATCGGAAACACTTTCATCGATTGCTTCGAAGTGGAGGC
ATCCAAACTAAAAGCTGACTTTCTACTACAAGGCACCCTTTACCCGGACG
TGATCGAATCTGTAAGTCATAAAGGGCCGTCTGCAACGATCAAGACCCAT
CACAATGTTGGTGGTTTACCAGCCCATATGAAACTGCAGTTGATAGAACC
GCTGCGTTTCTTGTTCAAAGACGAAGTGCGAAGCCTTGGATTGGAGTTGG
GTATTGAGAGTGAAAGCATCTACAGGCACCCATTCCCAGGACCTGGACTG
GCTATTCGAATCTTGGGCGAGGTAACAGCAAAGAGGCTGAGAGCTCTGCG
CGAAGCCGATACTATCTTCCTACATGAACTTCGATCTGCTGGATTGTATC
GGGACATTGGACAAGCTTTCGCAGCGCTCCTACCTGTGAAAGCTGTTGGT
GTGATGGGCGATAAACGTACTTATGAGGAAGTTATTGTTCTGAGAGCAGT
GAAGACAAAAGATTTCATGACAGCCGATTGGGTGGACCTCCCAACACCTC
TACTGCGATTGATATCCTCCAGGATTGTGAACGAGATCCCCGGCGTGAAC
CGAGTCACCTATGATATCACGTCGAAGCCTCCTGGAACCATCGAGTGGGA
ATAA
back to top